Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02390 Brassica napus
A03p06500 Brassica napus
A10p24230 Brassica napus
Aa31LG11G15030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1649 Anthoceros agrestis
Actinidia30893 Actinidia chinensis
Actinidia38211 Actinidia chinensis
Ah.16g107000 Amaranthus hybridus
AL6G24920 Arabidopsis lyrata
Aqoxy3G01473 Aquilegia oxysepala
Aqoxy6G01653 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2MK8LH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5QR84K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6W6YW6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BC5FZ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BJ0JYY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5D511 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FUZ8GP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G51SBL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GNZ56R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZLP0D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J9253V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JVM03Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PXFG7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RWP2KD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3AU98 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XD375C Arachis hypogaea
AT5G14240 Arabidopsis thaliana
ATR1136G208 Amborella trichopoda
Atru.chr6.2513 Acer truncatum
AUR62001824 Chenopodium quinoa
AUR62009611 Chenopodium quinoa
BcaB01g05299 Brassica carinata
BcaB01g06337 Brassica carinata
BcaB08g36969 Brassica carinata
BcaC03g13509 Brassica carinata
BcaC04g19050 Brassica carinata
BcaNung03173 Brassica carinata
BolC3t13251H Brassica oleracea
BolC9t59129H Brassica oleracea
BraA02t05209Z Brassica rapa
BraA03t09982Z Brassica rapa
BraA10t44488Z Brassica rapa
C02p06630 Brassica napus
C03p07500 Brassica napus
C09p62920 Brassica napus
CAN.G1161.37 Capsicum annuum
CANSAT64G0772 Cannabis sativa
CARHR103230 Cardamine hirsuta
CARHR199100 Cardamine hirsuta
Carub.0006s1244 Capsella rubella
Cc00_g35860 Coffea canephora
Cc05_g01780 Coffea canephora
Cc05_g01790 Coffea canephora
CDE04G3082 Ceratophyllum demersum
CDE07G0254 Ceratophyllum demersum
CDE07G1941 Ceratophyllum demersum
Cfa007254 Carpinus fangiana
Cfa024299 Carpinus fangiana
Ciclev10016373m.g Citrus clementina
CiPaw.03G052300 Carya illinoinensis
ClCG08G000860 Citrullus lanatus
COL.COLO4_08765 Corchorus olitorius
Cpa.g.sc130.8 Carica papaya
Cre06.g291900 Chlamydomonas reinhardtii
CsaV3_3G044040 Cucumis sativus L.
CSS0005089 Camellia sinensis var. sinensis
CSS0009984 Camellia sinensis var. sinensis
CSS0014178 Camellia sinensis var. sinensis
CSS0020533 Camellia sinensis var. sinensis
CSS0027121 Camellia sinensis var. sinensis
CSS0031371 Camellia sinensis var. sinensis
CSS0032708 Camellia sinensis var. sinensis
DCAR_021763 Daucus carota
Dinv25678 Davidia involucrata
Duzib147G0281 Durio zibethinus
Duzib264G0931 Durio zibethinus
ECA246G0154 Erigeron canadensis
EL10Ac8g19289 Beta vulgaris
EL10Ac9g22681 Beta vulgaris
Eucgr.J02308 Eucalyptus grandis
FAN01G2972 Fragaria x ananassa
FAN03G2227 Fragaria x ananassa
FAN05G2878 Fragaria x ananassa
FAN05G2899 Fragaria x ananassa
FAN06G1012 Fragaria x ananassa
FAN06G2104 Fragaria x ananassa
FAN10G0806 Fragaria x ananassa
FAN10G1829 Fragaria x ananassa
FAN14G1208 Fragaria x ananassa
FAN14G3337 Fragaria x ananassa
FvH4_6g20890 Fragaria vesca
Glyma.12G242000 Glycine max
Glyma.19G075600 Glycine max
Gohir.A05G340500 Gossypium hirsutum
Gohir.A09G034300 Gossypium hirsutum
Gohir.D04G078900 Gossypium hirsutum
Gohir.D09G035200 Gossypium hirsutum
Gorai.006G040100 Gossypium raimondii
Gorai.012G088800 Gossypium raimondii
GSVIVG01001822001 Vitis vinifera
HanXRQChr15g0474721 Helianthus annuus
HanXRQChr15g0474981 Helianthus annuus
HanXRQChr17g0534581 Helianthus annuus
HanXRQChr17g0534591 Helianthus annuus
HanXRQChr17g0534611 Helianthus annuus
HanXRQChr17g0534621 Helianthus annuus
HanXRQChr17g0534631 Helianthus annuus
HanXRQChr17g0550181 Helianthus annuus
HanXRQChr17g0550191 Helianthus annuus
Haze_14833 Corylus avellana
Hma1.2p1_0172F.1_g076190 Hydrangea macrophylla
HPP92_005181 Vanilla planifolia
Hund04990 Selenicereus undatus
Hund18929 Selenicereus undatus
Lalb_Chr06g0174311 Lupinus albus
Lj1g0013881 Lotus japonicus
Lj4g0023257 Lotus japonicus
Lj5A712T32 Lonicera japonica
Lj7A608T45 Lonicera japonica
Lsat_1_v5_gn_0_14320 Lactuca sativa
Lsat_1_v5_gn_1_126600 Lactuca sativa
Lsat_1_v5_gn_1_98620 Lactuca sativa
Lsat_1_v5_gn_2_114520 Lactuca sativa
Lsat_1_v5_gn_2_17820 Lactuca sativa
Lsat_1_v5_gn_2_58240 Lactuca sativa
Lsat_1_v5_gn_2_94421 Lactuca sativa
Lsat_1_v5_gn_2_9481 Lactuca sativa
Lsat_1_v5_gn_3_133181 Lactuca sativa
Lsat_1_v5_gn_4_110841 Lactuca sativa
Lsat_1_v5_gn_4_70420 Lactuca sativa
Lsat_1_v5_gn_6_73961 Lactuca sativa
Manes.17G106000 Manihot esculenta
Mapoly0059s0038 Marchantia polymorpha
MBI15_g24202_MAGBIO Magnolia biondii
MCO09G068 Micromonas commoda
MD09G1015300 Malus domestica
MD17G1015400 Malus domestica
Medtr2g034610 Medicago truncatula
MELO3C022190.2 Cucumis melo
Migut.D01746 Erythranthe guttata
Migut.H00013 Erythranthe guttata
MSTRG.3093 Avicennia marina
Nitab4.5_0000105g0150 Nicotiana tabacum
Nitab4.5_0003600g0020 Nicotiana tabacum
Nitab4.5_0004643g0030 Nicotiana tabacum
Nn1g00077 Nelumbo nucifera
Nn1g00078 Nelumbo nucifera
Nn1g00668 Nelumbo nucifera
Nn3g16636 Nelumbo nucifera
Nn6g34769 Nelumbo nucifera
Oeu050424.1 Olea europaea
Oeu058767.1 Olea europaea
Os01g0184800 Oryza sativa ssp. japonica
Peaxi162Scf00003g04521 Petunia axillaris
Peaxi162Scf00304g00127 Petunia axillaris
Peaxi162Scf00480g00212 Petunia axillaris
PGR083G1628 Punica granatum
PGSC0003DMG400011416 Solanum tuberosum
PGSC0003DMG400044234 Solanum tuberosum
Phvul.004G055600 Phaseolus vulgaris
Phvul.010G007000 Phaseolus vulgaris
Potri.001G334100 Populus trichocarpa
Potri.017G066200 Populus trichocarpa
Pp3c2_20640 Physcomitrium patens
PRCOL_00004862 Prasinoderma coloniale
Prupe.3G302500 Prunus persica
Prupe.6G027300 Prunus persica
Psat1g161760 Pisum sativum
PSO017G7282 Papaver somniferum
PSO478G3807 Papaver somniferum
PSO541G1060 Papaver somniferum
PSO541G1735 Papaver somniferum
PSO675G2052 Papaver somniferum
QL02p072446 Quercus lobata
RcHm_v2.0_Chr1g0359641 Rosa chinensis
RcHm_v2.0_Chr1g0359651 Rosa chinensis
RcHm_v2.0_Chr2g0174741 Rosa chinensis
RcHm_v2.0_Chr3g0477231 Rosa chinensis
RcHm_v2.0_Chr3g0477241 Rosa chinensis
RcHm_v2.0_Chr6g0252661 Rosa chinensis
Rhsim06G0126200 Rhododendron simsii
Rhsim10G0008800 Rhododendron simsii
Sabra16G0215200 Salix brachista
Sabra17G0062400 Salix brachista
Sc03g0006810 Simmondsia chinensis
Sed0027775 Sechium edule
SEGI_15348 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08223 Striga asiatica
SGA_v2.0_scaffold481G52325 Striga asiatica
SGA_v2.0_scaffold857G53675 Striga asiatica
SGA_v2.0_scaffold88G27300 Striga asiatica
SMO147G0291 Selaginella moellendorffii
Solyc10g078830.2 Solanum lycopersicum
Sopen10g029470 Solanum pennellii
Sp6g29790 Schrenkiella parvula
TAR371G0644 Trochodendron aralioides
TAR376G0821 Trochodendron aralioides
THA.LOC104822413 Tarenaya hassleriana
Thecc.04G030000 Theobroma cacao
Thhalv10014458m.g Eutrema salsugineum
TPR.G5775 Trifolium pratense
TWI36G1507 Tripterygium wilfordii
unitig_0.g1941 Utricularia gibba
vmacro05937 Vaccinium macrocarpon
Zm00001eb121870 Zea mays
Zm00001eb269870 Zea mays

User provided reference genes

Program Settings