Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24060 Brassica napus
A03p24070 Brassica napus
A04p32470 Brassica napus
A09p51590 Brassica napus
Aa31LG10G13630 Aethionema arabicum
Aa31LG1G24960 Aethionema arabicum
Actinidia17219 Actinidia chinensis
Actinidia35892 Actinidia chinensis
Actinidia35893 Actinidia chinensis
AL4G41820 Arabidopsis lyrata
Aqoxy1G02134 Aquilegia oxysepala
Aqoxy2G04082 Aquilegia oxysepala
Aqoxy7G03524 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.067A10 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3MFN7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AM9QWL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7AR35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MNWX4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU92WK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0YEJU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U55V76 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XI0QBF Arachis hypogaea
AT2G43150 Arabidopsis thaliana
ATR0743G132 Amborella trichopoda
Atru.chr3.1652 Acer truncatum
BcaB01g03408 Brassica carinata
BcaC01g05257 Brassica carinata
BcaC07g40319 Brassica carinata
BolC3t15227H Brassica oleracea
BolC4t22061H Brassica oleracea
BolC4t28519H Brassica oleracea
BolC8t51035H Brassica oleracea
BraA03t11617Z Brassica rapa
BraA04t18713Z Brassica rapa
BraA05t19350Z Brassica rapa
BraA09t40598Z Brassica rapa
C03p28650 Brassica napus
C04p70160 Brassica napus
C08p34360 Brassica napus
CAN.G484.117 Capsicum annuum
CAN.G484.118 Capsicum annuum
CAN.G484.119 Capsicum annuum
CAN.G484.120 Capsicum annuum
CAN.G484.121 Capsicum annuum
CAN.G484.123 Capsicum annuum
CAN.G484.124 Capsicum annuum
CAN.G710.61 Capsicum annuum
CARHR138220 Cardamine hirsuta
CARHR169650 Cardamine hirsuta
Carub.0555s0001 Capsella rubella
Ca_13008_v3 Cicer arietinum L.
Ca_13009_v3 Cicer arietinum L.
Ca_13010_v3 Cicer arietinum L.
Cc03_g11110 Coffea canephora
Cfa015791 Carpinus fangiana
CiPaw.01G105500 Carya illinoinensis
ClCG07G016610 Citrullus lanatus
Cpa.g.sc164.2 Carica papaya
CsaV3_4G003720 Cucumis sativus L.
CSS0007766 Camellia sinensis var. sinensis
DCAR_023908 Daucus carota
Dinv22670 Davidia involucrata
Dinv44225 Davidia involucrata
Duzib151G0954 Durio zibethinus
Duzib268G0989 Durio zibethinus
ECA238G3164 Erigeron canadensis
FAN07G0287 Fragaria x ananassa
FAN07G0339 Fragaria x ananassa
FAN12G0818 Fragaria x ananassa
FAN12G1447 Fragaria x ananassa
FAN17G2242 Fragaria x ananassa
FAN22G1863 Fragaria x ananassa
FvH4_4g11660 Fragaria vesca
Glyma.08G362466 Glycine max
Glyma.20G247850 Glycine max
Gohir.A02G013500 Gossypium hirsutum
Gohir.A09G210500 Gossypium hirsutum
Gohir.D02G014550 Gossypium hirsutum
Gohir.D09G203900 Gossypium hirsutum
Gorai.005G018000 Gossypium raimondii
Gorai.006G227800 Gossypium raimondii
HanXRQChr03g0075661 Helianthus annuus
HanXRQChr14g0437071 Helianthus annuus
HanXRQChr14g0437091 Helianthus annuus
Haze_00702 Corylus avellana
Hund06534 Selenicereus undatus
Hund31331 Selenicereus undatus
Hund31332 Selenicereus undatus
Lalb_Chr02g0144471 Lupinus albus
Lalb_Chr21g0307691 Lupinus albus
Lj2g0020269 Lotus japonicus
Lj2g0020959 Lotus japonicus
Lj2g0025231 Lotus japonicus
Lj5g0001019 Lotus japonicus
Lj6A66G18 Lonicera japonica
Lj6C64T13 Lonicera japonica
Lj6g0023787 Lotus japonicus
Lju521A1G13 Lonicera japonica
Lsat_1_v5_gn_2_50521 Lactuca sativa
Lsat_1_v5_gn_2_51341 Lactuca sativa
Lsat_1_v5_gn_2_51461 Lactuca sativa
Lsat_1_v5_gn_2_51640 Lactuca sativa
Manes.11G114666 Manihot esculenta
MBI08_g05488_MAGBIO Magnolia biondii
MBI08_g05491_MAGBIO Magnolia biondii
MBI08_g05500_MAGBIO Magnolia biondii
MBI08_g20550_MAGBIO Magnolia biondii
MBI11_g02538_MAGBIO Magnolia biondii
MBI11_g33754_MAGBIO Magnolia biondii
Medtr1918s0010 Medicago truncatula
Medtr1g033080 Medicago truncatula
Medtr1g033100 Medicago truncatula
Medtr1g033130 Medicago truncatula
Medtr1g116947 Medicago truncatula
MELO3C017682.2 Cucumis melo
Migut.C00834 Erythranthe guttata
Migut.G00806 Erythranthe guttata
MSTRG.24590 Avicennia marina
Nitab4.5_0000383g0230 Nicotiana tabacum
Nitab4.5_0000383g0350 Nicotiana tabacum
Nitab4.5_0000978g0120 Nicotiana tabacum
Nitab4.5_0001049g0140 Nicotiana tabacum
Nitab4.5_0002252g0100 Nicotiana tabacum
Nitab4.5_0002908g0110 Nicotiana tabacum
Nitab4.5_0004568g0020 Nicotiana tabacum
Nitab4.5_0011287g0010 Nicotiana tabacum
Nitab4.5_0020026g0010 Nicotiana tabacum
Nn1g09740 Nelumbo nucifera
Nn7g38030 Nelumbo nucifera
Oeu006702.1 Olea europaea
Os01g0899700 Oryza sativa ssp. japonica
Peaxi162Scf00286g00022 Petunia axillaris
Peaxi162Scf00323g00064 Petunia axillaris
Peaxi162Scf00323g00521 Petunia axillaris
Peaxi162Scf00323g00616 Petunia axillaris
Peaxi162Scf00323g00618 Petunia axillaris
Peaxi162Scf00323g00620 Petunia axillaris
Peaxi162Scf00378g00826 Petunia axillaris
Peaxi162Scf00378g00827 Petunia axillaris
Peaxi162Scf00378g00828 Petunia axillaris
Peaxi162Scf39387g00001 Petunia axillaris
PGR142G3893 Punica granatum
PGSC0003DMG400002364 Solanum tuberosum
PGSC0003DMG400004675 Solanum tuberosum
PGSC0003DMG400004676 Solanum tuberosum
PGSC0003DMG400021603 Solanum tuberosum
Phvul.007G002400 Phaseolus vulgaris
Phvul.007G084600 Phaseolus vulgaris
Phvul.008G003200 Phaseolus vulgaris
Potri.002G231250 Populus trichocarpa
Potri.014G151101 Populus trichocarpa
Pp3c5_9210 Physcomitrium patens
Prupe.1G182200 Prunus persica
Psat0s2492g0040 Pisum sativum
Psat0s3952g0080 Pisum sativum
Psat0s3952g0120 Pisum sativum
Psat6g050240 Pisum sativum
PSO017G4822 Papaver somniferum
PSO017G6609 Papaver somniferum
PSO017G7143 Papaver somniferum
PSO478G2289 Papaver somniferum
PSO675G6401 Papaver somniferum
QL10p046489 Quercus lobata
RcHm_v2.0_Chr4g0408821 Rosa chinensis
Rhsim09G0035700 Rhododendron simsii
Sabra02G0176500 Salix brachista
Sabra14G0114500 Salix brachista
Sabra14G0114800 Salix brachista
Sabra14G0114900 Salix brachista
Sc10g0006170 Simmondsia chinensis
Sed0006652 Sechium edule
Sed0017100 Sechium edule
SEGI_35656 Sequoiadendron giganteum
SGA_v2.0_scaffold406G51043 Striga asiatica
SMO223G0034 Selaginella moellendorffii
Solyc09g098510.3 Solanum lycopersicum
Solyc12g038700.1 Solanum lycopersicum
Solyc12g038860.1 Solanum lycopersicum
Solyc12g098780.2 Solanum lycopersicum
Solyc12g098800.2 Solanum lycopersicum
Solyc12g150131.1 Solanum lycopersicum
Solyc12g150132.1 Solanum lycopersicum
Sopen09g036430 Solanum pennellii
Sopen12g018920 Solanum pennellii
Sopen12g033500 Solanum pennellii
Sopen12g033510 Solanum pennellii
Sopen12g033520 Solanum pennellii
Sopen12g033530 Solanum pennellii
Sopen12g033540 Solanum pennellii
Sp4g25280 Schrenkiella parvula
Sp5g03830 Schrenkiella parvula
SpUn0921_0020 Schrenkiella parvula
SpUn1318_0010 Schrenkiella parvula
TAR365G0590 Trochodendron aralioides
THA.LOC104802293 Tarenaya hassleriana
THA.LOC104803514 Tarenaya hassleriana
Thecc.04G182000 Theobroma cacao
TPR.G36208 Trifolium pratense
TPR.G40851 Trifolium pratense
TPR.G6490 Trifolium pratense
TPR.G6494 Trifolium pratense
TWI15G0198 Tripterygium wilfordii
unitig_578.g16248 Utricularia gibba
unitig_744.g24077 Utricularia gibba
vmacro00571 Vaccinium macrocarpon
VMungo0720G0780 Vigna mungo
VMungo1383G0624 Vigna mungo
Zm00001eb144520 Zea mays

User provided reference genes

Program Settings