Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25980 Brassica napus
A03p53920 Brassica napus
A09p27310 Brassica napus
Aa31LG9G10630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3178 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1909 Anthoceros agrestis
Actinidia15259 Actinidia chinensis
Actinidia22611 Actinidia chinensis
Actinidia27513 Actinidia chinensis
Actinidia27514 Actinidia chinensis
Actinidia29861 Actinidia chinensis
Actinidia38048 Actinidia chinensis
Ah.05g168860 Amaranthus hybridus
AL6G46510 Arabidopsis lyrata
AL7G30520 Arabidopsis lyrata
Aqoxy5G01279 Aquilegia oxysepala
Aqoxy6G01378 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H8JSRB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NP9S9N Arachis hypogaea
AT4G11800 Arabidopsis thaliana
AT4G23000 Arabidopsis thaliana
ATR0709G069 Amborella trichopoda
Atru.chr13.635 Acer truncatum
AUR62022448 Chenopodium quinoa
AUR62039319 Chenopodium quinoa
BcaB01g01679 Brassica carinata
BcaB05g23806 Brassica carinata
BcaC03g16327 Brassica carinata
BolC2t10163H Brassica oleracea
BolC7t45726H Brassica oleracea
BolC9t56309H Brassica oleracea
BraA02t07596Z Brassica rapa
BraA03t14461Z Brassica rapa
BraA09t38297Z Brassica rapa
C02p41460 Brassica napus
C07p52330 Brassica napus
C09p34640 Brassica napus
CAN.G1422.3 Capsicum annuum
CAN.G371.46 Capsicum annuum
CANSAT25G2224 Cannabis sativa
CARHR230060 Cardamine hirsuta
CARHR254510 Cardamine hirsuta
Carub.0006s3091 Capsella rubella
Carub.0007s1827 Capsella rubella
Ca_13307_v3 Cicer arietinum L.
CBR_g29430 Chara braunii
CBR_g29432 Chara braunii
CBR_g765 Chara braunii
CBR_g767 Chara braunii
Cc10_g04020 Coffea canephora
CDE03G0102 Ceratophyllum demersum
Cfa018512 Carpinus fangiana
Cfa018515 Carpinus fangiana
Ciclev10000140m.g Citrus clementina
CiPaw.16G046700 Carya illinoinensis
CiPaw.16G047400 Carya illinoinensis
CiPaw.16G047500 Carya illinoinensis
CiPaw.16G047600 Carya illinoinensis
CiPaw.16G049300 Carya illinoinensis
ClCG08G015660 Citrullus lanatus
COL.COLO4_26461 Corchorus olitorius
Cpa.g.c41437 Carica papaya
Cpa.g.sc1124.3 Carica papaya
Cpa.g.sc297.1 Carica papaya
Cre03.g150800 Chlamydomonas reinhardtii
CsaV3_2G028120 Cucumis sativus L.
CSS0020917 Camellia sinensis var. sinensis
CSS0029839 Camellia sinensis var. sinensis
CSS0046933 Camellia sinensis var. sinensis
DCAR_023940 Daucus carota
DCAR_028414 Daucus carota
Dinv08769 Davidia involucrata
Dinv35983 Davidia involucrata
Duzib093G1598 Durio zibethinus
Duzib116G0711 Durio zibethinus
ECA232G2639 Erigeron canadensis
ECA246G0633 Erigeron canadensis
EL10Ac1g01777 Beta vulgaris
Eucgr.B02922 Eucalyptus grandis
Eucgr.B02927 Eucalyptus grandis
Eucgr.F02708 Eucalyptus grandis
Eucgr.L01670 Eucalyptus grandis
Eucgr.L01671 Eucalyptus grandis
FAN15G0927 Fragaria x ananassa
FAN20G0796 Fragaria x ananassa
FAN27G0136 Fragaria x ananassa
FvH4_2g34860 Fragaria vesca
Glyma.14G080800 Glycine max
Glyma.17G244600 Glycine max
Gohir.A05G200600 Gossypium hirsutum
Gohir.A05G320308 Gossypium hirsutum
Gohir.A06G016600 Gossypium hirsutum
Gohir.D05G203800 Gossypium hirsutum
Gohir.D06G014700 Gossypium hirsutum
Gorai.009G209900 Gossypium raimondii
Gorai.010G017500 Gossypium raimondii
GSVIVG01009556001 Vitis vinifera
HanXRQChr02g0056101 Helianthus annuus
HanXRQChr05g0152181 Helianthus annuus
HanXRQChr09g0267941 Helianthus annuus
HanXRQChr09g0267981 Helianthus annuus
HanXRQChr10g0304011 Helianthus annuus
HanXRQChr16g0507451 Helianthus annuus
Haze_17560 Corylus avellana
Haze_17561 Corylus avellana
Haze_17563 Corylus avellana
Haze_17564 Corylus avellana
Hma1.2p1_0114F.1_g055190 Hydrangea macrophylla
Hma1.2p1_0260F.1_g104760 Hydrangea macrophylla
Hma1.2p1_0337F.1_g129290 Hydrangea macrophylla
HPP92_016679 Vanilla planifolia
Hund17590 Selenicereus undatus
Lalb_Chr14g0368841 Lupinus albus
Lalb_Chr22g0355231 Lupinus albus
Lj4A52T42 Lonicera japonica
Lj4C776G1 Lonicera japonica
Lj5g0021120 Lotus japonicus
Lsat_1_v5_gn_4_124081 Lactuca sativa
Lsat_1_v5_gn_6_113580 Lactuca sativa
Manes.05G171000 Manihot esculenta
Mapoly0020s0063 Marchantia polymorpha
MBI03_g35289_MAGBIO Magnolia biondii
MBI03_g35290_MAGBIO Magnolia biondii
MBI03_g42553_MAGBIO Magnolia biondii
MBI03_g45559_MAGBIO Magnolia biondii
MD00G1187500 Malus domestica
MD08G1106100 Malus domestica
MD08G1106200 Malus domestica
MD15G1086800 Malus domestica
Medtr1g020000 Medicago truncatula
MELO3C010890.2 Cucumis melo
MELO3C035025.2 Cucumis melo
Migut.C00602 Erythranthe guttata
MSTRG.1333 Avicennia marina
Nitab4.5_0000068g0460 Nicotiana tabacum
Nitab4.5_0000453g0160 Nicotiana tabacum
Nitab4.5_0005301g0010 Nicotiana tabacum
Nitab4.5_0011844g0020 Nicotiana tabacum
Nn1g05846 Nelumbo nucifera
Nn5g30207 Nelumbo nucifera
Oeu006153.2 Olea europaea
Oeu009557.1 Olea europaea
Oeu025377.1 Olea europaea
Oeu043547.1 Olea europaea
Os07g0106000 Oryza sativa ssp. japonica
Os07g0134500 Oryza sativa ssp. japonica
Os07g0140566 Oryza sativa ssp. japonica
Peaxi162Scf00064g00220 Petunia axillaris
Peaxi162Scf00528g00823 Petunia axillaris
PGR031G1546 Punica granatum
PGSC0003DMG400008030 Solanum tuberosum
PGSC0003DMG400015447 Solanum tuberosum
PGSC0003DMG400033662 Solanum tuberosum
Phvul.001G019800 Phaseolus vulgaris
Potri.014G034400 Populus trichocarpa
Pp3c1_37890 Physcomitrium patens
Pp3c5_1910 Physcomitrium patens
Prupe.1G440500 Prunus persica
Psat6g012080 Pisum sativum
PSO170G2235 Papaver somniferum
PSO210G0952 Papaver somniferum
QL02p005735 Quercus lobata
QL02p005748 Quercus lobata
QL02p005770 Quercus lobata
QL02p005794 Quercus lobata
QL02p005806 Quercus lobata
QL05p050670 Quercus lobata
QL93p0115_0003 Quercus lobata
RcHm_v2.0_Chr6g0307181 Rosa chinensis
Rhsim06G0046900 Rhododendron simsii
Sabra14G0024400 Salix brachista
SalBow4G1770 Salvia bowleyana
SalBow6G1638 Salvia bowleyana
SalBow6G6854 Salvia bowleyana
Sc02g0006950 Simmondsia chinensis
Sc02g0006960 Simmondsia chinensis
Sc02g0006970 Simmondsia chinensis
Sed0000864 Sechium edule
SEGI_03228 Sequoiadendron giganteum
SEGI_30325 Sequoiadendron giganteum
SGA_v2.0_scaffold208G42005 Striga asiatica
SGA_v2.0_scaffold458G51940 Striga asiatica
SGA_v2.0_scaffold458G51943 Striga asiatica
SHI08307 Sapria himalayana
SMO358G0100 Selaginella moellendorffii
Solyc02g043880.1 Solanum lycopersicum
Solyc04g079300.3 Solanum lycopersicum
Solyc12g088920.2 Solanum lycopersicum
Sopen04g032890 Solanum pennellii
Sopen12g030820 Solanum pennellii
Sp6g05650 Schrenkiella parvula
Sp7g21090 Schrenkiella parvula
TAR381G0638 Trochodendron aralioides
TAR625G0168 Trochodendron aralioides
THA.LOC104806367 Tarenaya hassleriana
THA.LOC104813013 Tarenaya hassleriana
THA.LOC104814278 Tarenaya hassleriana
Thecc.08G012800 Theobroma cacao
Thhalv10024304m.g Eutrema salsugineum
Thhalv10028387m.g Eutrema salsugineum
TPR.G13691 Trifolium pratense
TWI56G0991 Tripterygium wilfordii
unitig_26.g9818 Utricularia gibba
unitig_578.g16531 Utricularia gibba
vmacro21555 Vaccinium macrocarpon
VMungo0647G0987 Vigna mungo
Zm00001eb096290 Zea mays
Zm00001eb298290 Zea mays

User provided reference genes

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