Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p10710 Brassica napus
A06p10720 Brassica napus
A09p23700 Brassica napus
Aa31LG2G2650 Aethionema arabicum
Aa31LG2G7940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5331 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1085 Anthoceros agrestis
Actinidia12429 Actinidia chinensis
Actinidia37492 Actinidia chinensis
Ah.03g147340 Amaranthus hybridus
Ah.03g147350 Amaranthus hybridus
AL1G26630 Arabidopsis lyrata
AL1G48790 Arabidopsis lyrata
AL5G11170 Arabidopsis lyrata
Aqoxy1G02273 Aquilegia oxysepala
Aqoxy3G04046 Aquilegia oxysepala
Aqoxy4G00109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DQT168 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GRN8HF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TT82BA Arachis hypogaea
AT1G14660 Arabidopsis thaliana
AT2G01980 Arabidopsis thaliana
ATR0598G076 Amborella trichopoda
Atru.chr11.983 Acer truncatum
AUR62003491 Chenopodium quinoa
AUR62017800 Chenopodium quinoa
BcaB02g06535 Brassica carinata
BcaB07g30722 Brassica carinata
BcaC04g21541 Brassica carinata
BcaC05g25381 Brassica carinata
BcaC05g25383 Brassica carinata
BolC5t30005H Brassica oleracea
BolC9t55917H Brassica oleracea
BraA06t24252Z Brassica rapa
BraA09t37969Z Brassica rapa
C05p12620 Brassica napus
C09p30540 Brassica napus
CAN.G1237.29 Capsicum annuum
CAN.G282.92 Capsicum annuum
CAN.G282.93 Capsicum annuum
CAN.G282.94 Capsicum annuum
CANSAT78G1043 Cannabis sativa
CARHR015150 Cardamine hirsuta
CARHR015160 Cardamine hirsuta
CARHR144580 Cardamine hirsuta
Carub.0001s1442 Capsella rubella
Carub.0005s0099 Capsella rubella
Ca_18188_v3 Cicer arietinum L.
Ca_18198_v3 Cicer arietinum L.
Ca_28660_v3 Cicer arietinum L.
Ca_29105_v3 Cicer arietinum L.
CBR_g6616 Chara braunii
Cc11_g05260 Coffea canephora
Cc11_g05270 Coffea canephora
Cc11_g05280 Coffea canephora
CDE06G1581 Ceratophyllum demersum
Cfa015081 Carpinus fangiana
Ciclev10015265m.g Citrus clementina
Ciclev10018329m.g Citrus clementina
CiPaw.05G159900 Carya illinoinensis
CiPaw.05G160000 Carya illinoinensis
CiPaw.05G160100 Carya illinoinensis
ClCG01G006860 Citrullus lanatus
COL.COLO4_27555 Corchorus olitorius
COL.COLO4_38274 Corchorus olitorius
Cpa.g.sc2.63 Carica papaya
Cpa.g.sc2.68 Carica papaya
Cpa.g.sc2.70 Carica papaya
Cre01.g034150 Chlamydomonas reinhardtii
Cre05.g234645 Chlamydomonas reinhardtii
CsaV3_5G017250 Cucumis sativus L.
CSS0011262 Camellia sinensis var. sinensis
DCAR_030316 Daucus carota
DCAR_030317 Daucus carota
DCAR_030318 Daucus carota
Dinv02702 Davidia involucrata
Dinv07020 Davidia involucrata
Duzib268G0109 Durio zibethinus
ECA234G2339 Erigeron canadensis
ECA246G3356 Erigeron canadensis
EL10Ac6g15381 Beta vulgaris
Eucgr.B02635 Eucalyptus grandis
Eucgr.G02062 Eucalyptus grandis
FAN07G0883 Fragaria x ananassa
FAN12G1356 Fragaria x ananassa
FAN22G1284 Fragaria x ananassa
FAN22G1869 Fragaria x ananassa
FvH4_4g35880 Fragaria vesca
FvH4_4g35890 Fragaria vesca
Glyma.08G092000 Glycine max
Gohir.A03G113800 Gossypium hirsutum
Gohir.D02G138100 Gossypium hirsutum
Gorai.005G154600 Gossypium raimondii
GSVIVG01011573001 Vitis vinifera
HanXRQChr12g0381631 Helianthus annuus
HanXRQChr13g0400621 Helianthus annuus
HanXRQChr15g0469331 Helianthus annuus
Haze_10794 Corylus avellana
Haze_10795 Corylus avellana
Haze_10796 Corylus avellana
Haze_10797 Corylus avellana
Hma1.2p1_0068F.1_g037310 Hydrangea macrophylla
Hma1.2p1_0068F.1_g037320 Hydrangea macrophylla
Hma1.2p1_0197F.1_g085160 Hydrangea macrophylla
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla
HPP92_016411 Vanilla planifolia
Lalb_Chr13g0293001 Lupinus albus
Lj4g0008630 Lotus japonicus
Lj4g0019755 Lotus japonicus
Lj6C728G5 Lonicera japonica
Lsat_1_v5_gn_5_35481 Lactuca sativa
Lsat_1_v5_gn_6_55260 Lactuca sativa
Manes.15G139900 Manihot esculenta
Manes.17G091100 Manihot esculenta
Mapoly0062s0025 Marchantia polymorpha
Mapoly0206s0002 Marchantia polymorpha
MBI13_g17879_MAGBIO Magnolia biondii
MBI13_g26466_MAGBIO Magnolia biondii
MCO04G150 Micromonas commoda
MD13G1014100 Malus domestica
MD13G1014200 Malus domestica
MD16G1011200 Malus domestica
MD16G1011300 Malus domestica
MD16G1011400 Malus domestica
MD16G1011500 Malus domestica
Medtr2g038400 Medicago truncatula
MELO3C005228.2 Cucumis melo
Migut.E00570 Erythranthe guttata
MSTRG.2101 Avicennia marina
Nitab4.5_0001529g0040 Nicotiana tabacum
Nitab4.5_0001529g0050 Nicotiana tabacum
Nitab4.5_0005031g0060 Nicotiana tabacum
Nitab4.5_0007122g0010 Nicotiana tabacum
Nitab4.5_0009873g0010 Nicotiana tabacum
Nn4g24593 Nelumbo nucifera
Oeu005355.3 Olea europaea
Oeu005357.1 Olea europaea
Os12g0641100 Oryza sativa ssp. japonica
Peaxi162Scf00130g01212 Petunia axillaris
Peaxi162Scf00130g01216 Petunia axillaris
Peaxi162Scf00349g00111 Petunia axillaris
PGR102G1943 Punica granatum
PGR142G0945 Punica granatum
PGSC0003DMG400010630 Solanum tuberosum
PGSC0003DMG400022786 Solanum tuberosum
PGSC0003DMG402029222 Solanum tuberosum
Phvul.002G185150 Phaseolus vulgaris
Potri.007G100500 Populus trichocarpa
Potri.008G140700 Populus trichocarpa
Potri.010G100900 Populus trichocarpa
Pp3c16_14280 Physcomitrium patens
Pp3c22_9570 Physcomitrium patens
PRCOL_00005089 Prasinoderma coloniale
PRCOL_00005090 Prasinoderma coloniale
Prupe.1G339200 Prunus persica
Psat7g085560 Pisum sativum
PSO017G1263 Papaver somniferum
PSO170G2638 Papaver somniferum
PSO170G6380 Papaver somniferum
PSO339G1388 Papaver somniferum
PSO729G0139 Papaver somniferum
QL03p039637 Quercus lobata
QL03p039662 Quercus lobata
RcHm_v2.0_Chr4g0445491 Rosa chinensis
Rhsim09G0082800 Rhododendron simsii
Sabra08G0106800 Salix brachista
Sc02g0005300 Simmondsia chinensis
Sc03g0005950 Simmondsia chinensis
Sc03g0005960 Simmondsia chinensis
Sed0007344 Sechium edule
SEGI_13848 Sequoiadendron giganteum
SEGI_17003 Sequoiadendron giganteum
SEGI_28338 Sequoiadendron giganteum
SEGI_29378 Sequoiadendron giganteum
SEGI_32724 Sequoiadendron giganteum
SGA_v2.0_scaffold348G49593 Striga asiatica
SHI04223 Sapria himalayana
SHI04225 Sapria himalayana
SMO367G0300 Selaginella moellendorffii
SMO367G0872 Selaginella moellendorffii
Solyc01g005020.3 Solanum lycopersicum
Solyc04g018090.2 Solanum lycopersicum
Solyc04g018100.4 Solanum lycopersicum
Sopen00g005880 Solanum pennellii
Sopen01g001090 Solanum pennellii
Sopen04g009310 Solanum pennellii
Sp1g13020 Schrenkiella parvula
Sp1g13030 Schrenkiella parvula
Sp1g13040 Schrenkiella parvula
Sp2g13410 Schrenkiella parvula
TAR629G0420 Trochodendron aralioides
TAR629G1764 Trochodendron aralioides
THA.LOC104805106 Tarenaya hassleriana
Thecc.02G301400 Theobroma cacao
Thhalv10003547m.g Eutrema salsugineum
Thhalv10006906m.g Eutrema salsugineum
TPR.G11847 Trifolium pratense
TWI56G1413 Tripterygium wilfordii
TWI74G0523 Tripterygium wilfordii
unitig_27.g25301 Utricularia gibba
unitig_699.g19544 Utricularia gibba
vmacro10755 Vaccinium macrocarpon
vmacro10756 Vaccinium macrocarpon
VMungo0251G2069 Vigna mungo
Zm00001eb033240 Zea mays

User provided reference genes

Program Settings