Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p07040 Brassica napus
Aa31LG1G4540 Aethionema arabicum
Actinidia01178 Actinidia chinensis
Actinidia06552 Actinidia chinensis
Ah.02g131880 Amaranthus hybridus
AL1G21120 Arabidopsis lyrata
Aqoxy3G03209 Aquilegia oxysepala
Aqoxy3G03695 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7VFA6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9XQY3T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AJ34HY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CTL4DA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IV17LC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QRJF90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SF0LED Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMG0EF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0ETWJ Arachis hypogaea
AT1G10380 Arabidopsis thaliana
ATR0001G059 Amborella trichopoda
ATR0177G004 Amborella trichopoda
ATR0661G380 Amborella trichopoda
Atru.chr11.1630 Acer truncatum
Atru.chr11.1631 Acer truncatum
Atru.chr11.1634 Acer truncatum
Atru.chr11.1884 Acer truncatum
Atru.chr3.1410 Acer truncatum
Atru.chr4.1489 Acer truncatum
AUR62026295 Chenopodium quinoa
AUR62026487 Chenopodium quinoa
BcaC05g24890 Brassica carinata
BcaC05g24893 Brassica carinata
BcaC05g24896 Brassica carinata
BcaC05g24921 Brassica carinata
BolC5t29603H Brassica oleracea
BraA06t23918Z Brassica rapa
C05p08530 Brassica napus
CAN.G27.49 Capsicum annuum
CANSAT01G0301 Cannabis sativa
CANSAT01G2393 Cannabis sativa
CANSAT64G1368 Cannabis sativa
CARHR010510 Cardamine hirsuta
Carub.0001s0980 Capsella rubella
Ca_04687_v3 Cicer arietinum L.
Ca_17749_v3 Cicer arietinum L.
Cc07_g14970 Coffea canephora
Cc11_g13740 Coffea canephora
CDE11G0724 Ceratophyllum demersum
Cfa002632 Carpinus fangiana
Cfa009055 Carpinus fangiana
Ciclev10026163m.g Citrus clementina
Ciclev10032232m.g Citrus clementina
CiPaw.03G143400 Carya illinoinensis
CiPaw.05G142400 Carya illinoinensis
ClCG08G009030 Citrullus lanatus
COL.COLO4_27270 Corchorus olitorius
COL.COLO4_27884 Corchorus olitorius
COL.COLO4_36232 Corchorus olitorius
Cpa.g.sc5.295 Carica papaya
CsaV3_6G036120 Cucumis sativus L.
CSS0002708 Camellia sinensis var. sinensis
CSS0023681 Camellia sinensis var. sinensis
CSS0029206 Camellia sinensis var. sinensis
CSS0035567 Camellia sinensis var. sinensis
CSS0039777 Camellia sinensis var. sinensis
Dinv13204 Davidia involucrata
Dinv16734 Davidia involucrata
Duzib147G1442 Durio zibethinus
Duzib187G0275 Durio zibethinus
Duzib248G0322 Durio zibethinus
Duzib251G0030 Durio zibethinus
Duzib251G0290 Durio zibethinus
ECA246G1951 Erigeron canadensis
ECA246G2920 Erigeron canadensis
EL10Ac6g13121 Beta vulgaris
Eucgr.B03398 Eucalyptus grandis
Eucgr.I00510 Eucalyptus grandis
FAN07G0260 Fragaria x ananassa
FAN07G1653 Fragaria x ananassa
FAN12G0416 Fragaria x ananassa
FAN12G3100 Fragaria x ananassa
FAN17G0444 Fragaria x ananassa
FAN19G3170 Fragaria x ananassa
FAN22G0408 Fragaria x ananassa
FAN22G2046 Fragaria x ananassa
FAN23G0100 Fragaria x ananassa
FAN26G2679 Fragaria x ananassa
FvH4_1g20600 Fragaria vesca
FvH4_4g30030 Fragaria vesca
FvH4_4g35530 Fragaria vesca
Glyma.01G039900 Glycine max
Glyma.02G024900 Glycine max
Glyma.05G177200 Glycine max
Gohir.A03G145300 Gossypium hirsutum
Gohir.A12G088200 Gossypium hirsutum
Gohir.D02G168700 Gossypium hirsutum
Gohir.D12G086400 Gossypium hirsutum
Gorai.005G189100 Gossypium raimondii
Gorai.008G096700 Gossypium raimondii
GSVIVG01006040001 Vitis vinifera
GSVIVG01020110001 Vitis vinifera
HanXRQChr12g0375241 Helianthus annuus
HanXRQChr17g0544541 Helianthus annuus
Haze_11909 Corylus avellana
Haze_12088 Corylus avellana
Haze_24898 Corylus avellana
Hma1.2p1_0190F.1_g082970 Hydrangea macrophylla
Hma1.2p1_0265F.1_g106450 Hydrangea macrophylla
Hma1.2p1_0289F.1_g114310 Hydrangea macrophylla
Hma1.2p1_0566F.1_g179780 Hydrangea macrophylla
Hund25287 Selenicereus undatus
Lalb_Chr05g0217491 Lupinus albus
Lj2g0013263 Lotus japonicus
Lj6P796T40 Lonicera japonica
Lsat_1_v5_gn_3_50580 Lactuca sativa
Manes.01G027500 Manihot esculenta
Manes.01G192800 Manihot esculenta
Manes.12G133100 Manihot esculenta
MBI04_g26972_MAGBIO Magnolia biondii
MBI19_g30539_MAGBIO Magnolia biondii
MD01G1032500 Malus domestica
MD13G1062800 Malus domestica
MD13G1082400 Malus domestica
MD15G1322500 Malus domestica
MD16G1081500 Malus domestica
Medtr5g037310 Medicago truncatula
Medtr8g090055 Medicago truncatula
MELO3C000449.2 Cucumis melo
Migut.H01116 Erythranthe guttata
Migut.L00145 Erythranthe guttata
MSTRG.2304 Avicennia marina
MSTRG.657 Avicennia marina
Nitab4.5_0000231g0330 Nicotiana tabacum
Nitab4.5_0000408g0030 Nicotiana tabacum
Nitab4.5_0001487g0120 Nicotiana tabacum
Nitab4.5_0001726g0050 Nicotiana tabacum
Nitab4.5_0002052g0030 Nicotiana tabacum
Nitab4.5_0002594g0060 Nicotiana tabacum
Nn4g22993 Nelumbo nucifera
Nn5g30082 Nelumbo nucifera
Oeu011706.1 Olea europaea
Peaxi162Scf00026g00214 Petunia axillaris
Peaxi162Scf00175g00117 Petunia axillaris
Peaxi162Scf00209g00931 Petunia axillaris
PGR102G1693 Punica granatum
PGR119G1934 Punica granatum
PGSC0003DMG400022598 Solanum tuberosum
PGSC0003DMG400028372 Solanum tuberosum
Phvul.002G080000 Phaseolus vulgaris
Phvul.002G257200 Phaseolus vulgaris
Potri.007G094800 Populus trichocarpa
Potri.008G095900 Populus trichocarpa
Potri.010G040500 Populus trichocarpa
Potri.010G158500 Populus trichocarpa
Prupe.1G286900 Prunus persica
Prupe.3G121800 Prunus persica
Prupe.6G189700 Prunus persica
Psat2g114880 Pisum sativum
PSO210G2606 Papaver somniferum
PSO541G4688 Papaver somniferum
PSO591G0121 Papaver somniferum
PSO761G0447 Papaver somniferum
PSO781G0085 Papaver somniferum
PSO832G2557 Papaver somniferum
QL03p066527 Quercus lobata
QL06p048933 Quercus lobata
QL12p030788 Quercus lobata
RcHm_v2.0_Chr2g0113031 Rosa chinensis
RcHm_v2.0_Chr4g0438321 Rosa chinensis
RcHm_v2.0_Chr4g0445181 Rosa chinensis
Rhsim09G0127300 Rhododendron simsii
Rhsim12G0128300 Rhododendron simsii
Sabra07G0078200 Salix brachista
Sabra08G0072300 Salix brachista
Sabra10G0026600 Salix brachista
Sabra10G0120400 Salix brachista
SalBow2G0631 Salvia bowleyana
SalBow5G5311 Salvia bowleyana
SalBow8G3723 Salvia bowleyana
Sc04g0008570 Simmondsia chinensis
Sed0016162 Sechium edule
SEGI_08810 Sequoiadendron giganteum
SEGI_13335 Sequoiadendron giganteum
SEGI_28894 Sequoiadendron giganteum
SGA_v2.0_scaffold166G38304 Striga asiatica
Solyc05g006700.4 Solanum lycopersicum
Solyc05g012280.3 Solanum lycopersicum
Sopen05g002650 Solanum pennellii
Sopen05g007110 Solanum pennellii
Sp1g08980 Schrenkiella parvula
TAR076G0004 Trochodendron aralioides
TAR264G0005 Trochodendron aralioides
TAR374G1554 Trochodendron aralioides
THA.LOC104816728 Tarenaya hassleriana
Thecc.01G099000 Theobroma cacao
Thecc.02G235800 Theobroma cacao
Thecc.02G330400 Theobroma cacao
Thhalv10008265m.g Eutrema salsugineum
TPR.G26727 Trifolium pratense
TPR.G6286 Trifolium pratense
TWI18G0836 Tripterygium wilfordii
TWI31G0714 Tripterygium wilfordii
TWI53G1097 Tripterygium wilfordii
TWI75G1209 Tripterygium wilfordii
unitig_0.g1888 Utricularia gibba
vmacro10425 Vaccinium macrocarpon
vmacro16313 Vaccinium macrocarpon
VMungo0251G1736 Vigna mungo
VMungo1215G2363 Vigna mungo

User provided reference genes

Program Settings