Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40010 Brassica napus
A06p08230 Brassica napus
A08p33320 Brassica napus
Aa31LG1G3080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1116 Anthoceros agrestis
Actinidia10910 Actinidia chinensis
Actinidia22112 Actinidia chinensis
Ah.11g043320 Amaranthus hybridus
AL1G22820 Arabidopsis lyrata
Aqoxy1G02774 Aquilegia oxysepala
Aqoxy1G03841 Aquilegia oxysepala
Aqoxy1G03842 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4A4I8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJSZ1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VHEE5Y Arachis hypogaea
AT1G11680 Arabidopsis thaliana
ATR0043G012 Amborella trichopoda
ATR0043G049 Amborella trichopoda
ATR0214G001 Amborella trichopoda
ATR0582G146 Amborella trichopoda
ATR0582G245 Amborella trichopoda
Atru.chr12.1336 Acer truncatum
Atru.chr12.1337 Acer truncatum
Atru.chr12.1435 Acer truncatum
AUR62001384 Chenopodium quinoa
AUR62013783 Chenopodium quinoa
AUR62023373 Chenopodium quinoa
AUR62025596 Chenopodium quinoa
AUR62027540 Chenopodium quinoa
AUR62027541 Chenopodium quinoa
AUR62035811 Chenopodium quinoa
AUR62035813 Chenopodium quinoa
AUR62035814 Chenopodium quinoa
AUR62035815 Chenopodium quinoa
AUR62035816 Chenopodium quinoa
AUR62044644 Chenopodium quinoa
BcaB03g13240 Brassica carinata
BcaC05g25034 Brassica carinata
BcaC05g25036 Brassica carinata
BcaC07g38681 Brassica carinata
BcaC09g48318 Brassica carinata
BcaC09g48322 Brassica carinata
BcaC09g48332 Brassica carinata
BcaC09g48348 Brassica carinata
BcaC09g48352 Brassica carinata
BcaNung04809 Brassica carinata
BolC1t05067H Brassica oleracea
BolC1t05086H Brassica oleracea
BolC5t29720H Brassica oleracea
BolC8t47886H Brassica oleracea
BolC8t49116H Brassica oleracea
BraA01t04042Z Brassica rapa
BraA06t24023Z Brassica rapa
BraA08t35249Z Brassica rapa
C01p51040 Brassica napus
C01p51050 Brassica napus
C01p51280 Brassica napus
C01p51290 Brassica napus
C01p51430 Brassica napus
C01p51460 Brassica napus
C05p09790 Brassica napus
C08p14820 Brassica napus
CAN.G282.74 Capsicum annuum
CANSAT01G0892 Cannabis sativa
CARHR011990 Cardamine hirsuta
CARHR100170 Cardamine hirsuta
Carub.0001s1132 Capsella rubella
Ca_23129_v3 Cicer arietinum L.
CBR_g12707 Chara braunii
Cc11_g14940 Coffea canephora
CDE02G0640 Ceratophyllum demersum
CDE05G1673 Ceratophyllum demersum
Cfa009457 Carpinus fangiana
Cfa025262 Carpinus fangiana
Cfa026894 Carpinus fangiana
Ciclev10004850m.g Citrus clementina
CiPaw.05G100500 Carya illinoinensis
CiPaw.06G110000 Carya illinoinensis
ClCG07G011920 Citrullus lanatus
COL.COLO4_37598 Corchorus olitorius
Cpa.g.sc119.42 Carica papaya
Cre02.g092350 Chlamydomonas reinhardtii
CsaV3_4G002240 Cucumis sativus L.
CSS0003855 Camellia sinensis var. sinensis
DCAR_022749 Daucus carota
Dinv12599 Davidia involucrata
Duzib052G0166 Durio zibethinus
Duzib132G0279 Durio zibethinus
ECA246G3528 Erigeron canadensis
EL10Ac1g00722 Beta vulgaris
EL10Ac3g06202 Beta vulgaris
EL10Ac3g06203 Beta vulgaris
EL10Ac3g06204 Beta vulgaris
EL10Ac3g06206 Beta vulgaris
EL10Ac3g06208 Beta vulgaris
Eucgr.B03563 Eucalyptus grandis
FAN07G1836 Fragaria x ananassa
FAN12G2070 Fragaria x ananassa
FAN17G2758 Fragaria x ananassa
FvH4_4g22540 Fragaria vesca
Glyma.03G115300 Glycine max
Glyma.07G110900 Glycine max
Gohir.A03G153000 Gossypium hirsutum
Gohir.A12G140000 Gossypium hirsutum
Gohir.D02G175800 Gossypium hirsutum
Gohir.D12G144500 Gossypium hirsutum
Gorai.005G197400 Gossypium raimondii
Gorai.008G155900 Gossypium raimondii
GSVIVG01001101001 Vitis vinifera
GSVIVG01027208001 Vitis vinifera
HanXRQChr17g0540371 Helianthus annuus
Haze_12510 Corylus avellana
Hma1.2p1_1494F.1_g286940 Hydrangea macrophylla
HPP92_023029 Vanilla planifolia
Hund17844 Selenicereus undatus
Hund17845 Selenicereus undatus
Lalb_Chr13g0290431 Lupinus albus
Lalb_Chr21g0307761 Lupinus albus
Lj3g0023959 Lotus japonicus
Lj5C767T12 Lonicera japonica
Lj9A124T28 Lonicera japonica
Lj9A128T46 Lonicera japonica
Lsat_1_v5_gn_3_32600 Lactuca sativa
Manes.08G100400 Manihot esculenta
Manes.09G188800 Manihot esculenta
Manes.16G051000 Manihot esculenta
Mapoly0003s0192 Marchantia polymorpha
MBI07_g13941_MAGBIO Magnolia biondii
MCO02G285 Micromonas commoda
MD00G1206300 Malus domestica
MD07G1091900 Malus domestica
MD13G1131600 Malus domestica
MD16G1141900 Malus domestica
Medtr8g006450 Medicago truncatula
Medtr8g006495 Medicago truncatula
MELO3C017815.2 Cucumis melo
Migut.B00119 Erythranthe guttata
Migut.K01047 Erythranthe guttata
MSTRG.16881 Avicennia marina
MSTRG.448 Avicennia marina
Nitab4.5_0000069g0530 Nicotiana tabacum
Nitab4.5_0003304g0030 Nicotiana tabacum
Nn3g16258 Nelumbo nucifera
Nn4g22120 Nelumbo nucifera
Oeu010259.1 Olea europaea
Oeu011727.1 Olea europaea
Os02g0113200 Oryza sativa ssp. japonica
Os02g0323600 Oryza sativa ssp. japonica
Os05g0211100 Oryza sativa ssp. japonica
Os05g0415800 Oryza sativa ssp. japonica
Os05g0415900 Oryza sativa ssp. japonica
Os05g0416400 Oryza sativa ssp. japonica
Os07g0464700 Oryza sativa ssp. japonica
Os07g0567100 Oryza sativa ssp. japonica
Os11g0525200 Oryza sativa ssp. japonica
Peaxi162Scf00097g00139 Petunia axillaris
PGR102G1656 Punica granatum
PGSC0003DMG400016402 Solanum tuberosum
Phvul.010G053100 Phaseolus vulgaris
Potri.001G068400 Populus trichocarpa
Potri.003G161700 Populus trichocarpa
Pp3c24_16540 Physcomitrium patens
Pp3c8_15480 Physcomitrium patens
PRCOL_00005544 Prasinoderma coloniale
Prupe.1G214000 Prunus persica
Psat4g225960 Pisum sativum
PSO339G2157 Papaver somniferum
PSO384G4179 Papaver somniferum
QL03p049017 Quercus lobata
RcHm_v2.0_Chr4g0428771 Rosa chinensis
Rhsim12G0016600 Rhododendron simsii
Rhsim12G0016800 Rhododendron simsii
Sabra01G0047600 Salix brachista
Sabra03G0117500 Salix brachista
SalBow6G5419 Salvia bowleyana
Sc11g0000060 Simmondsia chinensis
Sed0004111 Sechium edule
Sed0025427 Sechium edule
SEGI_16891 Sequoiadendron giganteum
SEGI_21583 Sequoiadendron giganteum
SEGI_35639 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13262 Striga asiatica
SHI04109 Sapria himalayana
SMO196G0249 Selaginella moellendorffii
SMO196G0269 Selaginella moellendorffii
Solyc01g008110.4 Solanum lycopersicum
Sopen01g003660 Solanum pennellii
Sp1g10290 Schrenkiella parvula
TAR622G1016 Trochodendron aralioides
TAR629G0534 Trochodendron aralioides
THA.LOC104807262 Tarenaya hassleriana
Thecc.02G191200 Theobroma cacao
Thhalv10007480m.g Eutrema salsugineum
TPR.G24957 Trifolium pratense
TWI18G0756 Tripterygium wilfordii
TWI36G0431 Tripterygium wilfordii
unitig_22.g6374 Utricularia gibba
unitig_747.g21109 Utricularia gibba
vmacro01014 Vaccinium macrocarpon
vmacro01015 Vaccinium macrocarpon
VMungo0331G1423 Vigna mungo
Zm00001eb114290 Zea mays
Zm00001eb159000 Zea mays
Zm00001eb163800 Zea mays
Zm00001eb170560 Zea mays
Zm00001eb170580 Zea mays
Zm00001eb349320 Zea mays
Zm00001eb405760 Zea mays

User provided reference genes

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