Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12770 Brassica napus
A04p26700 Brassica napus
A04p28850 Brassica napus
A05p10660 Brassica napus
A05p32240 Brassica napus
A05p33100 Brassica napus
A09p44800 Brassica napus
Aa31LG9G16170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3406 Anthoceros agrestis
Actinidia11434 Actinidia chinensis
Ah.01g022040 Amaranthus hybridus
AL4G31070 Arabidopsis lyrata
Aqoxy5G04041 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D0LQY1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1T9JW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6IBWZ Arachis hypogaea
AT2G35040 Arabidopsis thaliana
ATR0150G008 Amborella trichopoda
Atru.chr10.431 Acer truncatum
AUR62015011 Chenopodium quinoa
AUR62022320 Chenopodium quinoa
AUR62034379 Chenopodium quinoa
BcaB02g09485 Brassica carinata
BcaB05g22512 Brassica carinata
BcaB06g28811 Brassica carinata
BcaB06g28812 Brassica carinata
BcaB06g29137 Brassica carinata
BcaC02g07738 Brassica carinata
BcaC02g07739 Brassica carinata
BcaC02g11585 Brassica carinata
BcaC04g19680 Brassica carinata
BcaC04g19802 Brassica carinata
BcaC04g19805 Brassica carinata
BolC2t10487H Brassica oleracea
BolC4t22966H Brassica oleracea
BolC4t27890H Brassica oleracea
BolC9t58009H Brassica oleracea
BolC9t58011H Brassica oleracea
BolC9t58152H Brassica oleracea
BraA04t16730Z Brassica rapa
BraA05t20007Z Brassica rapa
BraA06t25765Z Brassica rapa
BraA08t32277Z Brassica rapa
BraA08t33338Z Brassica rapa
BraA09t41745Z Brassica rapa
C03p72820 Brassica napus
C04p13760 Brassica napus
C09p51500 Brassica napus
C09p51540 Brassica napus
C09p52850 Brassica napus
CAN.G514.6 Capsicum annuum
CANSAT56G2301 Cannabis sativa
CANSAT56G3182 Cannabis sativa
CARHR129210 Cardamine hirsuta
Carub.0004s1674 Capsella rubella
Ca_18076_v3 Cicer arietinum L.
CBR_g50928 Chara braunii
Cc01_g05380 Coffea canephora
Cc02_g09680 Coffea canephora
Cc02_g09690 Coffea canephora
Cc02_g28610 Coffea canephora
CDE02G3604 Ceratophyllum demersum
CDE02G4481 Ceratophyllum demersum
CDE06G0368 Ceratophyllum demersum
Cfa000680 Carpinus fangiana
Cfa000681 Carpinus fangiana
Ciclev10014669m.g Citrus clementina
CiPaw.10G062800 Carya illinoinensis
ClCG03G004230 Citrullus lanatus
COL.COLO4_17637 Corchorus olitorius
Cpa.g.c33226 Carica papaya
Cpa.g.sc30.140 Carica papaya
Cre12.g537581 Chlamydomonas reinhardtii
CsaV3_1G010170 Cucumis sativus L.
CSS0018694 Camellia sinensis var. sinensis
DCAR_001294 Daucus carota
Dinv01965 Davidia involucrata
Dinv18011 Davidia involucrata
Duzib132G1085 Durio zibethinus
Duzib248G0655 Durio zibethinus
Duzib248G1352 Durio zibethinus
ECA232G1899 Erigeron canadensis
EL10Ac1g01734 Beta vulgaris
EL10Ac1g01790 Beta vulgaris
EL10Ac1g02079 Beta vulgaris
EL10Ac5g10906 Beta vulgaris
Eucgr.A00697 Eucalyptus grandis
Eucgr.A00699 Eucalyptus grandis
Eucgr.A00705 Eucalyptus grandis
Eucgr.A00708 Eucalyptus grandis
Eucgr.A00733 Eucalyptus grandis
Eucgr.L01257 Eucalyptus grandis
FAN01G0101 Fragaria x ananassa
FAN03G3028 Fragaria x ananassa
FAN06G1854 Fragaria x ananassa
FAN06G3868 Fragaria x ananassa
FAN15G0156 Fragaria x ananassa
FAN19G0112 Fragaria x ananassa
FAN20G2649 Fragaria x ananassa
FAN23G2047 Fragaria x ananassa
FAN26G3221 Fragaria x ananassa
FvH4_1g24580 Fragaria vesca
FvH4_7g04800 Fragaria vesca
Glyma.04G133100 Glycine max
Glyma.11G158400 Glycine max
Gohir.A01G124000 Gossypium hirsutum
Gohir.A12G048600 Gossypium hirsutum
Gohir.D01G111800 Gossypium hirsutum
Gohir.D12G047400 Gossypium hirsutum
Gorai.002G136700 Gossypium raimondii
Gorai.008G050100 Gossypium raimondii
GSVIVG01012120001 Vitis vinifera
HanXRQChr13g0406911 Helianthus annuus
Haze_06128 Corylus avellana
Haze_26981 Corylus avellana
Hma1.2p1_0181F.1_g079910 Hydrangea macrophylla
HPP92_009463 Vanilla planifolia
HPP92_009464 Vanilla planifolia
HPP92_009499 Vanilla planifolia
Hund10057 Selenicereus undatus
Lalb_Chr07g0189731 Lupinus albus
Lj2A344T44 Lonicera japonica
Lj3g0002589 Lotus japonicus
Lsat_1_v5_gn_4_97540 Lactuca sativa
Manes.08G044300 Manihot esculenta
Mapoly0032s0021 Marchantia polymorpha
MBI14_g40671_MAGBIO Magnolia biondii
MBI14_g44727_MAGBIO Magnolia biondii
MCO04G009 Micromonas commoda
MD12G1033700 Malus domestica
MD12G1088800 Malus domestica
MD12G1088900 Malus domestica
MD12G1089100 Malus domestica
MD14G1035300 Malus domestica
Medtr3g013710 Medicago truncatula
Medtr5g095820 Medicago truncatula
MELO3C002406.2 Cucumis melo
Migut.B00724 Erythranthe guttata
MSTRG.16470 Avicennia marina
Nitab4.5_0000443g0070 Nicotiana tabacum
Nitab4.5_0006246g0040 Nicotiana tabacum
Nn7g38195 Nelumbo nucifera
Os08g0206600 Oryza sativa ssp. japonica
Peaxi162Scf00199g00516 Petunia axillaris
PGR004G1969 Punica granatum
PGSC0003DMG400020817 Solanum tuberosum
Phvul.005G018700 Phaseolus vulgaris
Potri.008G128301 Populus trichocarpa
Potri.010G114400 Populus trichocarpa
Pp3c12_24590 Physcomitrium patens
Pp3c4_1350 Physcomitrium patens
Pp3s32_111 Physcomitrium patens
PRCOL_00001991 Prasinoderma coloniale
Prupe.5G007600 Prunus persica
Psat5g186600 Pisum sativum
Psat5g222920 Pisum sativum
PSO017G0093 Papaver somniferum
PSO675G6428 Papaver somniferum
QL11p013631 Quercus lobata
RcHm_v2.0_Chr1g0326741 Rosa chinensis
RcHm_v2.0_Chr2g0124681 Rosa chinensis
RcHm_v2.0_Chr3g0461401 Rosa chinensis
RcHm_v2.0_Chr3g0461421 Rosa chinensis
Rhsim01G0054700 Rhododendron simsii
Rhsim01G0111500 Rhododendron simsii
Rhsim01G0111700 Rhododendron simsii
Rhsim04G0089200 Rhododendron simsii
Rhsim04G0089900 Rhododendron simsii
Rhsim04G0092800 Rhododendron simsii
Rhsim04G0114800 Rhododendron simsii
Rhsim05G0149200 Rhododendron simsii
Sabra10G0084400 Salix brachista
SalBow1G1597 Salvia bowleyana
SalBow1G2706 Salvia bowleyana
SalBow1G7114 Salvia bowleyana
SalBow3G0238 Salvia bowleyana
SalBow3G3901 Salvia bowleyana
Sc26g0004530 Simmondsia chinensis
Sed0004438 Sechium edule
SEGI_14905 Sequoiadendron giganteum
SGA_v2.0_scaffold202G41492 Striga asiatica
SGA_v2.0_scaffold254G45247 Striga asiatica
SGA_v2.0_scaffold6G03254 Striga asiatica
SHI29159 Sapria himalayana
SHI29162 Sapria himalayana
SMO228G0099 Selaginella moellendorffii
Solyc08g075160.3 Solanum lycopersicum
Sopen08g023790 Solanum pennellii
Sp2g07060 Schrenkiella parvula
TAR626G1141 Trochodendron aralioides
THA.LOC104798558 Tarenaya hassleriana
THA.LOC104814352 Tarenaya hassleriana
Thecc.02G006200 Theobroma cacao
Thhalv10016407m.g Eutrema salsugineum
TPR.G1398 Trifolium pratense
TPR.G29009 Trifolium pratense
TPR.G6549 Trifolium pratense
TWI34G0807 Tripterygium wilfordii
unitig_46.g18256 Utricularia gibba
unitig_46.g18364 Utricularia gibba
unitig_46.g18375 Utricularia gibba
unitig_46.g18376 Utricularia gibba
unitig_48.g30290 Utricularia gibba
unitig_48.g30291 Utricularia gibba
vmacro14666 Vaccinium macrocarpon
vmacro14667 Vaccinium macrocarpon
VMungo1080G1879 Vigna mungo
Zm00001eb070920 Zea mays
Zm00001eb413740 Zea mays

User provided reference genes

Program Settings