Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia32754 Actinidia chinensis
Aqoxy7G01700 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9450TA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R7R2S9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RIWW0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJAD7Q Arachis hypogaea
ATR1120G013 Amborella trichopoda
ATR1120G074 Amborella trichopoda
ATR1120G137 Amborella trichopoda
ATR1120G144 Amborella trichopoda
ATR1120G160 Amborella trichopoda
ATR1120G187 Amborella trichopoda
Atru.chr1.3275 Acer truncatum
Atru.chr7.1333 Acer truncatum
Atru.chr7.2298 Acer truncatum
CAN.G395.13 Capsicum annuum
CAN.G438.69 Capsicum annuum
CANSAT56G1808 Cannabis sativa
CANSAT56G3518 Cannabis sativa
Ca_15626_v3 Cicer arietinum L.
Cc02_g27850 Coffea canephora
Cc04_g03410 Coffea canephora
Cfa002072 Carpinus fangiana
Cfa003268 Carpinus fangiana
Cfa013333 Carpinus fangiana
Ciclev10009982m.g Citrus clementina
Ciclev10010574m.g Citrus clementina
Ciclev10026796m.g Citrus clementina
CiPaw.03G233200 Carya illinoinensis
CiPaw.08G022600 Carya illinoinensis
ClCG11G013950 Citrullus lanatus
COL.COLO4_18709 Corchorus olitorius
COL.COLO4_26960 Corchorus olitorius
COL.COLO4_30383 Corchorus olitorius
COL.COLO4_34902 Corchorus olitorius
Cpa.g.sc205.7 Carica papaya
CsaV3_1G030570 Cucumis sativus L.
CSS0013613 Camellia sinensis var. sinensis
CSS0031837 Camellia sinensis var. sinensis
CSS0048107 Camellia sinensis var. sinensis
DCAR_010449 Daucus carota
DCAR_021143 Daucus carota
Dinv36618 Davidia involucrata
Duzib150G0682 Durio zibethinus
Duzib235G0396 Durio zibethinus
EL10Ac2g02521 Beta vulgaris
EL10Ac8g18510 Beta vulgaris
EL10Ac9g22003 Beta vulgaris
Eucgr.C02884 Eucalyptus grandis
FAN15G2136 Fragaria x ananassa
FAN20G0113 Fragaria x ananassa
FAN26G0013 Fragaria x ananassa
FAN27G2228 Fragaria x ananassa
FvH4_1g05060 Fragaria vesca
FvH4_2g36280 Fragaria vesca
Glyma.04G079300 Glycine max
Glyma.05G231600 Glycine max
Glyma.06G080800 Glycine max
Glyma.07G006000 Glycine max
Glyma.07G087300 Glycine max
Glyma.08G206600 Glycine max
Glyma.09G189600 Glycine max
Glyma.13G359300 Glycine max
Glyma.14G140500 Glycine max
Glyma.15G014600 Glycine max
Gohir.A05G049100 Gossypium hirsutum
Gohir.A05G130300 Gossypium hirsutum
Gohir.A07G006900 Gossypium hirsutum
Gohir.A07G024250 Gossypium hirsutum
Gohir.D05G051000 Gossypium hirsutum
Gohir.D05G129700 Gossypium hirsutum
Gohir.D07G005000 Gossypium hirsutum
Gohir.D07G027850 Gossypium hirsutum
Gorai.001G004600 Gossypium raimondii
Gorai.001G029100 Gossypium raimondii
Gorai.009G052600 Gossypium raimondii
Gorai.009G133500 Gossypium raimondii
HanXRQChr10g0313381 Helianthus annuus
Haze_16415 Corylus avellana
Haze_16418 Corylus avellana
Haze_21824 Corylus avellana
Hma1.2p1_0018F.1_g013430 Hydrangea macrophylla
Hma1.2p1_0092F.1_g046645 Hydrangea macrophylla
HPP92_002801 Vanilla planifolia
HPP92_008676 Vanilla planifolia
HPP92_008689 Vanilla planifolia
Lalb_Chr04g0262691 Lupinus albus
Lalb_Chr04g0262701 Lupinus albus
Lalb_Chr04g0262721 Lupinus albus
Lalb_Chr23g0269371 Lupinus albus
Lalb_Chr25g0279671 Lupinus albus
Lalb_Chr25g0279751 Lupinus albus
Lalb_Chr25g0279761 Lupinus albus
Lj1g0024029 Lotus japonicus
Lj3g0000153 Lotus japonicus
Lsat_1_v5_gn_5_130221 Lactuca sativa
Lsat_1_v5_gn_6_11260 Lactuca sativa
Lsat_1_v5_gn_7_40601 Lactuca sativa
Manes.03G064500 Manihot esculenta
Manes.03G064940 Manihot esculenta
Manes.04G123700 Manihot esculenta
Manes.11G047000 Manihot esculenta
Manes.16G066800 Manihot esculenta
Manes.16G117100 Manihot esculenta
MBI01_g34157_MAGBIO Magnolia biondii
MBI04_g08935_MAGBIO Magnolia biondii
MD17G1194700 Malus domestica
Medtr3g109430 Medicago truncatula
Medtr4g012330 Medicago truncatula
Medtr4g012350 Medicago truncatula
Medtr4g012390 Medicago truncatula
Medtr4g012460 Medicago truncatula
Medtr4g012490 Medicago truncatula
Medtr4g012510 Medicago truncatula
Medtr8g083490 Medicago truncatula
MELO3C003594.2 Cucumis melo
MELO3C029688.2 Cucumis melo
Migut.A00248 Erythranthe guttata
Migut.D01029 Erythranthe guttata
Migut.I00868 Erythranthe guttata
Nitab4.5_0000671g0120 Nicotiana tabacum
Nitab4.5_0002859g0010 Nicotiana tabacum
Nitab4.5_0003537g0060 Nicotiana tabacum
Nitab4.5_0005851g0010 Nicotiana tabacum
Nitab4.5_0011350g0010 Nicotiana tabacum
Nitab4.5_0011350g0020 Nicotiana tabacum
Nitab4.5_0014613g0010 Nicotiana tabacum
Nn2g11767 Nelumbo nucifera
Nn8g39213 Nelumbo nucifera
Oeu033486.1 Olea europaea
Oeu036629.1 Olea europaea
Oeu063975.1 Olea europaea
Oeu063976.1 Olea europaea
Os01g0182300 Oryza sativa ssp. japonica
Peaxi162Scf00015g00042 Petunia axillaris
Peaxi162Scf00546g00117 Petunia axillaris
Peaxi162Scf00560g00019 Petunia axillaris
PGSC0003DMG400000318 Solanum tuberosum
PGSC0003DMG400000319 Solanum tuberosum
PGSC0003DMG400000320 Solanum tuberosum
PGSC0003DMG400005684 Solanum tuberosum
PGSC0003DMG400016508 Solanum tuberosum
Phvul.002G313800 Phaseolus vulgaris
Phvul.004G162400 Phaseolus vulgaris
Phvul.005G171100 Phaseolus vulgaris
Phvul.009G105000 Phaseolus vulgaris
Phvul.010G150400 Phaseolus vulgaris
Potri.001G180500 Populus trichocarpa
Potri.003G055100 Populus trichocarpa
Potri.006G244200 Populus trichocarpa
Potri.018G036300 Populus trichocarpa
Prupe.1G454200 Prunus persica
Prupe.3G070700 Prunus persica
Prupe.7G229300 Prunus persica
Psat0s1478g0280 Pisum sativum
Psat6g033640 Pisum sativum
Psat7g251560 Pisum sativum
Psat7g251640 Pisum sativum
Psat7g251680 Pisum sativum
Psat7g251720 Pisum sativum
Psat7g251760 Pisum sativum
Psat7g251800 Pisum sativum
Psat7g252120 Pisum sativum
Psat7g252160 Pisum sativum
Psat7g252200 Pisum sativum
QL02p085574 Quercus lobata
QL05p023505 Quercus lobata
QL12p026142 Quercus lobata
RcHm_v2.0_Chr2g0090671 Rosa chinensis
RcHm_v2.0_Chr2g0137921 Rosa chinensis
RcHm_v2.0_Chr6g0305601 Rosa chinensis
Rhsim07G0155500 Rhododendron simsii
Rhsim08G0221600 Rhododendron simsii
RhsimUnG0085500 Rhododendron simsii
Sabra01G0146300 Salix brachista
Sabra06G0191100 Salix brachista
SalBow2G1122 Salvia bowleyana
SalBow2G2751 Salvia bowleyana
Sc08g0007380 Simmondsia chinensis
Sc09g0008990 Simmondsia chinensis
Sc18g0001140 Simmondsia chinensis
Sc21g0005130 Simmondsia chinensis
Sed0006476 Sechium edule
SGA_v2.0_scaffold27G11531 Striga asiatica
SGA_v2.0_scaffold5G02589 Striga asiatica
Solyc03g120170.1 Solanum lycopersicum
Solyc06g066710.1 Solanum lycopersicum
Solyc12g007040.3 Solanum lycopersicum
Sopen03g039050 Solanum pennellii
Sopen06g025000 Solanum pennellii
Sopen12g003020 Solanum pennellii
Sopen12g003030 Solanum pennellii
Sopen12g003040 Solanum pennellii
TAR624G0051 Trochodendron aralioides
Thecc.06G088500 Theobroma cacao
Thecc.09G038300 Theobroma cacao
Thecc.09G112200 Theobroma cacao
TPR.G12111 Trifolium pratense
TPR.G24192 Trifolium pratense
TPR.G27852 Trifolium pratense
TPR.G39760 Trifolium pratense
TPR.G39761 Trifolium pratense
unitig_578.g16687 Utricularia gibba
vmacro18909 Vaccinium macrocarpon
vmacro18910 Vaccinium macrocarpon
VMungo0251G2336 Vigna mungo
VMungo0331G0823 Vigna mungo
Zm00001eb122140 Zea mays
Zm00001eb337590 Zea mays

User provided reference genes

Program Settings