Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11070 Brassica napus
A03p15160 Brassica napus
A08p20320 Brassica napus
A10p10890 Brassica napus
Aa31LG3G9590 Aethionema arabicum
Actinidia03164 Actinidia chinensis
Actinidia06153 Actinidia chinensis
Actinidia08641 Actinidia chinensis
Actinidia34213 Actinidia chinensis
Ah.13g070160 Amaranthus hybridus
AL7G24730 Arabidopsis lyrata
AL8G28120 Arabidopsis lyrata
Aqoxy7G00091 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5WR99K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BVW291 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FQS251 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V8BXHT Arachis hypogaea
AT4G27900 Arabidopsis thaliana
AT5G53420 Arabidopsis thaliana
ATR0602G087 Amborella trichopoda
Atru.chr2.1747 Acer truncatum
AUR62006104 Chenopodium quinoa
AUR62019388 Chenopodium quinoa
BcaB03g12546 Brassica carinata
BcaB03g16341 Brassica carinata
BcaB05g22038 Brassica carinata
BcaC01g06251 Brassica carinata
BcaC03g14424 Brassica carinata
BcaC04g20454 Brassica carinata
BcaC07g38297 Brassica carinata
BcaC09g50529 Brassica carinata
BcaNung01613 Brassica carinata
BcaNung05986 Brassica carinata
BolC2t07977H Brassica oleracea
BolC8t48727H Brassica oleracea
BolC9t57209H Brassica oleracea
BraA02t06171Z Brassica rapa
BraA08t33990Z Brassica rapa
BraA10t43177Z Brassica rapa
C02p18370 Brassica napus
C03p17690 Brassica napus
C08p10410 Brassica napus
C09p43280 Brassica napus
CAN.G108.69 Capsicum annuum
CANSAT21G0960 Cannabis sativa
CARHR235600 Cardamine hirsuta
CARHR266540 Cardamine hirsuta
Carub.0007s1292 Capsella rubella
Carub.0008s1358 Capsella rubella
Ca_12808_v3 Cicer arietinum L.
Ca_16700_v3 Cicer arietinum L.
Cc02_g01650 Coffea canephora
CDE02G0738 Ceratophyllum demersum
CDE03G0016 Ceratophyllum demersum
CDE04G0126 Ceratophyllum demersum
CDE08G1590 Ceratophyllum demersum
CDE10G0383 Ceratophyllum demersum
CDE10G1019 Ceratophyllum demersum
Ciclev10022287m.g Citrus clementina
CiPaw.05G251300 Carya illinoinensis
CiPaw.05G251500 Carya illinoinensis
CiPaw.06G010300 Carya illinoinensis
ClCG01G000460 Citrullus lanatus
ClCG05G008890 Citrullus lanatus
COL.COLO4_11268 Corchorus olitorius
Cpa.g.sc3.74 Carica papaya
CsaV3_3G019950 Cucumis sativus L.
CsaV3_5G000530 Cucumis sativus L.
CSS0035082 Camellia sinensis var. sinensis
CSS0039935 Camellia sinensis var. sinensis
CSS0041355 Camellia sinensis var. sinensis
DCAR_008917 Daucus carota
DCAR_014543 Daucus carota
Dinv29291 Davidia involucrata
Dinv35326 Davidia involucrata
Duzib068G1205 Durio zibethinus
Duzib084G0491 Durio zibethinus
ECA233G4081 Erigeron canadensis
ECA238G2839 Erigeron canadensis
EL10Ac3g05297 Beta vulgaris
Eucgr.A01461 Eucalyptus grandis
Eucgr.K00370 Eucalyptus grandis
FAN01G2576 Fragaria x ananassa
FAN03G0680 Fragaria x ananassa
FAN06G1499 Fragaria x ananassa
FAN06G2573 Fragaria x ananassa
FAN06G3022 Fragaria x ananassa
FAN10G2276 Fragaria x ananassa
FAN10G4131 Fragaria x ananassa
FvH4_7g31700 Fragaria vesca
Glyma.04G236400 Glycine max
Glyma.06G127900 Glycine max
Gohir.A05G414200 Gossypium hirsutum
Gohir.A08G093600 Gossypium hirsutum
Gohir.A11G014700 Gossypium hirsutum
Gohir.A12G250400 Gossypium hirsutum
Gohir.D04G001900 Gossypium hirsutum
Gohir.D08G104200 Gossypium hirsutum
Gohir.D11G014800 Gossypium hirsutum
Gohir.D12G251200 Gossypium hirsutum
Gorai.004G111500 Gossypium raimondii
Gorai.007G015200 Gossypium raimondii
Gorai.008G269300 Gossypium raimondii
Gorai.012G003000 Gossypium raimondii
GSVIVG01038707001 Vitis vinifera
HanXRQChr07g0206531 Helianthus annuus
HanXRQChr13g0393101 Helianthus annuus
Haze_00224 Corylus avellana
Hma1.2p1_0404F.1_g145470 Hydrangea macrophylla
Hma1.2p1_0612F.1_g189050 Hydrangea macrophylla
Hma1.2p1_1188F.1_g265270 Hydrangea macrophylla
HPP92_000507 Vanilla planifolia
HPP92_021502 Vanilla planifolia
HPP92_021517 Vanilla planifolia
Hund11669 Selenicereus undatus
Hund20995 Selenicereus undatus
Lalb_Chr08g0240291 Lupinus albus
Lalb_Chr11g0066821 Lupinus albus
Lalb_Chr23g0271581 Lupinus albus
Lj1A1015T33 Lonicera japonica
Lj1g0015034 Lotus japonicus
Lj1g0017016 Lotus japonicus
Lj3C906G18 Lonicera japonica
Lsat_1_v5_gn_2_135961 Lactuca sativa
Lsat_1_v5_gn_8_5061 Lactuca sativa
Lsat_1_v5_gn_9_58341 Lactuca sativa
Lsat_1_v5_gn_9_58381 Lactuca sativa
Manes.06G159900 Manihot esculenta
Manes.14G006300 Manihot esculenta
MBI06_g08473_MAGBIO Magnolia biondii
MBI07_g07105_MAGBIO Magnolia biondii
MD01G1220400 Malus domestica
MD07G1289700 Malus domestica
Medtr1g008220 Medicago truncatula
Medtr3g091340 Medicago truncatula
MELO3C005883.2 Cucumis melo
MELO3C008491.2 Cucumis melo
Migut.F00223 Erythranthe guttata
Migut.F01036 Erythranthe guttata
MSTRG.27032 Avicennia marina
MSTRG.54 Avicennia marina
MSTRG.8518 Avicennia marina
MSTRG.8663 Avicennia marina
Nitab4.5_0001520g0010 Nicotiana tabacum
Nitab4.5_0015164g0010 Nicotiana tabacum
Nn1g00228 Nelumbo nucifera
Nn3g19001 Nelumbo nucifera
Oeu030283.1 Olea europaea
Oeu037086.1 Olea europaea
Oeu041047.3 Olea europaea
Oeu041316.1 Olea europaea
Os05g0595300 Oryza sativa ssp. japonica
Peaxi162Scf00550g00548 Petunia axillaris
PGR042G2895 Punica granatum
PGR142G2099 Punica granatum
PGSC0003DMG400009122 Solanum tuberosum
Phvul.001G074900 Phaseolus vulgaris
Phvul.009G053300 Phaseolus vulgaris
Potri.012G014000 Populus trichocarpa
Potri.015G014000 Populus trichocarpa
Prupe.2G310900 Prunus persica
Psat5g077440 Pisum sativum
Psat6g004440 Pisum sativum
PSO135G0416 Papaver somniferum
PSO384G3591 Papaver somniferum
QL09p009452 Quercus lobata
RcHm_v2.0_Chr1g0380881 Rosa chinensis
Rhsim03G0208000 Rhododendron simsii
Rhsim09G0205200 Rhododendron simsii
Sabra12G0017800 Salix brachista
Sabra15G0011600 Salix brachista
SalBow2G0551 Salvia bowleyana
SalBow4G2479 Salvia bowleyana
Sc13g0009790 Simmondsia chinensis
Sed0011826 Sechium edule
Sed0013328 Sechium edule
Sed0018241 Sechium edule
Sed0018456 Sechium edule
SGA_v2.0_scaffold192G40560 Striga asiatica
SGA_v2.0_scaffold44G16793 Striga asiatica
Solyc03g083400.3 Solanum lycopersicum
Sopen03g023170 Solanum pennellii
Sp6g15550 Schrenkiella parvula
Sp7g25870 Schrenkiella parvula
TAR375G0207 Trochodendron aralioides
TAR375G0411 Trochodendron aralioides
TAR629G3036 Trochodendron aralioides
THA.LOC104800294 Tarenaya hassleriana
THA.LOC104811921 Tarenaya hassleriana
THA.LOC104825142 Tarenaya hassleriana
Thecc.03G197500 Theobroma cacao
Thhalv10014378m.g Eutrema salsugineum
Thhalv10026081m.g Eutrema salsugineum
TPR.G12041 Trifolium pratense
TPR.G23309 Trifolium pratense
TWI14G1218 Tripterygium wilfordii
TWI23G0585 Tripterygium wilfordii
TWI39G0294 Tripterygium wilfordii
unitig_37.g11981 Utricularia gibba
unitig_46.g18817 Utricularia gibba
unitig_51.g30993 Utricularia gibba
unitig_92.g28256 Utricularia gibba
vmacro06538 Vaccinium macrocarpon
vmacro10116 Vaccinium macrocarpon
VMungo0647G1541 Vigna mungo
VMungo1309G2735 Vigna mungo
Zm00001eb081920 Zea mays
Zm00001eb297870 Zea mays
Zm00001eb345540 Zea mays

User provided reference genes

Program Settings