Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23800 Brassica napus
Aa31LG1G24540 Aethionema arabicum
Actinidia11058 Actinidia chinensis
Actinidia11060 Actinidia chinensis
Actinidia11061 Actinidia chinensis
Actinidia11179 Actinidia chinensis
AL4G41390 Arabidopsis lyrata
Aqoxy3G03359 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0N5IZC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7T7KVP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FSF6ET Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I00TLA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UJ9W7M Arachis hypogaea
AT2G42780 Arabidopsis thaliana
ATR0564G272 Amborella trichopoda
Atru.chr6.3560 Acer truncatum
AUR62024006 Chenopodium quinoa
AUR62031795 Chenopodium quinoa
BcaB01g03421 Brassica carinata
BolC3t15209H Brassica oleracea
BraA03t11595Z Brassica rapa
C03p28400 Brassica napus
CAN.G1481.13 Capsicum annuum
CANSAT64G0322 Cannabis sativa
CARHR137860 Cardamine hirsuta
Carub.0004s2522 Capsella rubella
Ca_14631_v3 Cicer arietinum L.
CBR_g3866 Chara braunii
CBR_g45704 Chara braunii
Cc05_g09140 Coffea canephora
CDE09G1426 Ceratophyllum demersum
Ciclev10016502m.g Citrus clementina
CiPaw.03G196000 Carya illinoinensis
CiPaw.04G135300 Carya illinoinensis
ClCG00G002620 Citrullus lanatus
ClCG00G002630 Citrullus lanatus
ClCG00G002640 Citrullus lanatus
ClCG02G018240 Citrullus lanatus
ClCG04G001440 Citrullus lanatus
ClCG05G006080 Citrullus lanatus
ClCG05G006090 Citrullus lanatus
ClCG05G006100 Citrullus lanatus
ClCG05G016440 Citrullus lanatus
ClCG05G016450 Citrullus lanatus
COL.COLO4_33683 Corchorus olitorius
Cpa.g.sc50.62 Carica papaya
Cre06.g280200 Chlamydomonas reinhardtii
CsaV3_6G015620 Cucumis sativus L.
CSS0003963 Camellia sinensis var. sinensis
CSS0013112 Camellia sinensis var. sinensis
CSS0034698 Camellia sinensis var. sinensis
DCAR_013292 Daucus carota
DCAR_013296 Daucus carota
DCAR_013299 Daucus carota
Dinv06273 Davidia involucrata
Duzib147G0193 Durio zibethinus
Duzib147G0255 Durio zibethinus
Duzib147G1453 Durio zibethinus
Duzib147G1668 Durio zibethinus
Duzib264G1182 Durio zibethinus
ECA233G5071 Erigeron canadensis
EL10Ac9g21022 Beta vulgaris
Eucgr.A01953 Eucalyptus grandis
FAN01G0352 Fragaria x ananassa
FAN01G0448 Fragaria x ananassa
FAN01G0665 Fragaria x ananassa
FAN01G3103 Fragaria x ananassa
FAN03G0887 Fragaria x ananassa
FAN03G1845 Fragaria x ananassa
FAN03G2894 Fragaria x ananassa
FAN05G2200 Fragaria x ananassa
FAN06G0899 Fragaria x ananassa
FAN06G0920 Fragaria x ananassa
FAN06G1303 Fragaria x ananassa
FAN06G3457 Fragaria x ananassa
FAN06G3844 Fragaria x ananassa
FAN06G4780 Fragaria x ananassa
FAN07G1637 Fragaria x ananassa
FAN09G2970 Fragaria x ananassa
FAN10G0419 Fragaria x ananassa
FAN10G2997 Fragaria x ananassa
FAN10G3489 Fragaria x ananassa
FAN10G3686 Fragaria x ananassa
FAN10G4067 Fragaria x ananassa
FAN10G4370 Fragaria x ananassa
FAN12G3545 Fragaria x ananassa
FAN14G0221 Fragaria x ananassa
FvH4_4g13130 Fragaria vesca
FvH4_6g37640 Fragaria vesca
FvH4_7g07290 Fragaria vesca
FvH4_7g18970 Fragaria vesca
FvH4_7g19430 Fragaria vesca
FvH4_7g20490 Fragaria vesca
Glyma.08G311300 Glycine max
Glyma.18G104250 Glycine max
Gohir.A09G003900 Gossypium hirsutum
Gohir.D09G003500 Gossypium hirsutum
Gorai.006G004800 Gossypium raimondii
GSVIVG01020789001 Vitis vinifera
HanXRQChr12g0367501 Helianthus annuus
Haze_13467 Corylus avellana
Hma1.2p1_3358F.1_g335570 Hydrangea macrophylla
HPP92_006023 Vanilla planifolia
HPP92_016801 Vanilla planifolia
HPP92_016823 Vanilla planifolia
Hund07739 Selenicereus undatus
Lalb_Chr15g0080841 Lupinus albus
Lj3A1010G57 Lonicera japonica
Lsat_1_v5_gn_8_31860 Lactuca sativa
Manes.01G129050 Manihot esculenta
Manes.02G087000 Manihot esculenta
Mapoly0213s0012 Marchantia polymorpha
MBI05_g35448_MAGBIO Magnolia biondii
MD04G1219900 Malus domestica
MD04G1220100 Malus domestica
MD09G1156600 Malus domestica
MD11G1064800 Malus domestica
MD17G1143100 Malus domestica
Medtr3g048940 Medicago truncatula
Medtr3g061710 Medicago truncatula
Medtr5g085090 Medicago truncatula
Medtr8g007200 Medicago truncatula
Medtr8g007210 Medicago truncatula
Medtr8g007225 Medicago truncatula
Medtr8g009140 Medicago truncatula
MELO3C019712.2 Cucumis melo
Migut.H02112 Erythranthe guttata
MSTRG.14301 Avicennia marina
Nitab4.5_0001121g0090 Nicotiana tabacum
Nitab4.5_0001402g0120 Nicotiana tabacum
Nitab4.5_0001402g0130 Nicotiana tabacum
Nitab4.5_0002737g0060 Nicotiana tabacum
Nn6g34433 Nelumbo nucifera
Oeu006147.1 Olea europaea
Oeu026477.1 Olea europaea
Os08g0169600 Oryza sativa ssp. japonica
Peaxi162Scf00154g00819 Petunia axillaris
PGR142G0623 Punica granatum
PGSC0003DMG400017292 Solanum tuberosum
Phvul.006G035800 Phaseolus vulgaris
Phvul.006G035900 Phaseolus vulgaris
Phvul.006G036100 Phaseolus vulgaris
Phvul.006G036144 Phaseolus vulgaris
Phvul.006G036188 Phaseolus vulgaris
Potri.012G059000 Populus trichocarpa
Pp3c20_1560 Physcomitrium patens
Pp3c24_14900 Physcomitrium patens
Prupe.3G169700 Prunus persica
Psat5g193080 Pisum sativum
PSO017G6555 Papaver somniferum
PSO478G4857 Papaver somniferum
QL07p011387 Quercus lobata
QL07p012148 Quercus lobata
QL07p012167 Quercus lobata
QL08p043364 Quercus lobata
QL12p023408 Quercus lobata
RcHm_v2.0_Chr1g0337481 Rosa chinensis
RcHm_v2.0_Chr1g0337681 Rosa chinensis
RcHm_v2.0_Chr1g0337771 Rosa chinensis
RcHm_v2.0_Chr1g0340101 Rosa chinensis
RcHm_v2.0_Chr1g0363261 Rosa chinensis
RcHm_v2.0_Chr1g0363291 Rosa chinensis
RcHm_v2.0_Chr1g0363311 Rosa chinensis
RcHm_v2.0_Chr1g0363471 Rosa chinensis
RcHm_v2.0_Chr1g0363891 Rosa chinensis
RcHm_v2.0_Chr1g0377321 Rosa chinensis
RcHm_v2.0_Chr2g0097481 Rosa chinensis
RcHm_v2.0_Chr2g0101011 Rosa chinensis
RcHm_v2.0_Chr2g0137701 Rosa chinensis
RcHm_v2.0_Chr2g0150641 Rosa chinensis
RcHm_v2.0_Chr2g0150701 Rosa chinensis
RcHm_v2.0_Chr3g0476421 Rosa chinensis
RcHm_v2.0_Chr5g0057921 Rosa chinensis
RcHm_v2.0_Chr5g0057931 Rosa chinensis
RcHm_v2.0_Chr5g0057951 Rosa chinensis
RcHm_v2.0_Chr5g0057981 Rosa chinensis
RcHm_v2.0_Chr5g0058001 Rosa chinensis
RcHm_v2.0_Chr5g0058031 Rosa chinensis
RcHm_v2.0_Chr5g0058051 Rosa chinensis
RcHm_v2.0_Chr5g0058081 Rosa chinensis
RcHm_v2.0_Chr5g0058101 Rosa chinensis
Rhsim06G0124100 Rhododendron simsii
Sabra12G0041000 Salix brachista
SalBow7G0715 Salvia bowleyana
SalBow7G2023 Salvia bowleyana
Sc12g0003770 Simmondsia chinensis
Sc21g0004410 Simmondsia chinensis
Sed0005315 Sechium edule
Sed0023934 Sechium edule
SEGI_28005 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02114 Striga asiatica
SHI23057 Sapria himalayana
SMO340G0244 Selaginella moellendorffii
Solyc07g055830.3 Solanum lycopersicum
Sopen07g029200 Solanum pennellii
Sp4g24900 Schrenkiella parvula
TAR629G3156 Trochodendron aralioides
THA.LOC104802266 Tarenaya hassleriana
THA.LOC104803061 Tarenaya hassleriana
Thecc.01G158000 Theobroma cacao
Thhalv10017014m.g Eutrema salsugineum
TPR.G13565 Trifolium pratense
TWI60G1626 Tripterygium wilfordii
unitig_44.g31549 Utricularia gibba
unitig_578.g16293 Utricularia gibba
vmacro12421 Vaccinium macrocarpon
VMungo0540G0900 Vigna mungo
VMungo1383G3494 Vigna mungo
Zm00001eb414950 Zea mays

User provided reference genes

Program Settings