Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36820 Brassica napus
A01p36840 Brassica napus
A01p36860 Brassica napus
A01p36890 Brassica napus
A06p06210 Brassica napus
A08p34520 Brassica napus
A08p34530 Brassica napus
A09p65470 Brassica napus
Aa31LG1G5560 Aethionema arabicum
Aa31LG1G5600 Aethionema arabicum
Actinidia11688 Actinidia chinensis
Actinidia17741 Actinidia chinensis
Ah.10g026900 Amaranthus hybridus
AL1G20040 Arabidopsis lyrata
AL3G30540 Arabidopsis lyrata
Aqoxy2G02513 Aquilegia oxysepala
Aqoxy5G02799 Aquilegia oxysepala
AT1G09520 Arabidopsis thaliana
AT3G17460 Arabidopsis thaliana
ATR0796G330 Amborella trichopoda
Atru.chr12.1545 Acer truncatum
Atru.chr4.3150 Acer truncatum
AUR62006811 Chenopodium quinoa
BcaB04g20839 Brassica carinata
BcaB06g25842 Brassica carinata
BcaC05g28789 Brassica carinata
BcaC07g36965 Brassica carinata
BcaC07g38513 Brassica carinata
BcaC07g38514 Brassica carinata
BcaC07g41877 Brassica carinata
BcaC09g48702 Brassica carinata
BcaC09g48706 Brassica carinata
BolC1t04640H Brassica oleracea
BolC1t04651H Brassica oleracea
BolC5t29506H Brassica oleracea
BolC5t33638H Brassica oleracea
BolC8t48925H Brassica oleracea
BolC8t52481H Brassica oleracea
BraA01t03748Z Brassica rapa
BraA06t23832Z Brassica rapa
BraA08t35363Z Brassica rapa
BraA08t35364Z Brassica rapa
BraA09t41892Z Brassica rapa
C01p46720 Brassica napus
C01p46780 Brassica napus
C05p07520 Brassica napus
C05p48980 Brassica napus
C08p00580 Brassica napus
C08p12950 Brassica napus
C08p49440 Brassica napus
CAN.G1248.20 Capsicum annuum
CANSAT54G2527 Cannabis sativa
CARHR009490 Cardamine hirsuta
CARHR092780 Cardamine hirsuta
Carub.0001s0886 Capsella rubella
Carub.0003s1718 Capsella rubella
Ca_10197_v3 Cicer arietinum L.
Ca_21366_v3 Cicer arietinum L.
Cc02_g35810 Coffea canephora
Cfa015729 Carpinus fangiana
Ciclev10005819m.g Citrus clementina
Ciclev10013870m.g Citrus clementina
CiPaw.01G129300 Carya illinoinensis
CiPaw.07G035600 Carya illinoinensis
ClCG03G017870 Citrullus lanatus
COL.COLO4_05489 Corchorus olitorius
COL.COLO4_34517 Corchorus olitorius
Cpa.g.sc48.222 Carica papaya
Cpa.g.sc53.77 Carica papaya
CsaV3_1G038030 Cucumis sativus L.
CsaV3_3G015530 Cucumis sativus L.
CSS0047817 Camellia sinensis var. sinensis
DCAR_001893 Daucus carota
DCAR_029289 Daucus carota
Dinv24510 Davidia involucrata
Dinv29508 Davidia involucrata
Dinv30944 Davidia involucrata
Duzib128G0788 Durio zibethinus
Duzib212G0032 Durio zibethinus
ECA234G2755 Erigeron canadensis
ECA236G0017 Erigeron canadensis
ECA240G0886 Erigeron canadensis
FAN02G3445 Fragaria x ananassa
FAN05G0723 Fragaria x ananassa
FAN09G1400 Fragaria x ananassa
FAN14G0797 Fragaria x ananassa
FAN14G3646 Fragaria x ananassa
FvH4_6g08440 Fragaria vesca
Glyma.10G143800 Glycine max
Glyma.13G118100 Glycine max
Glyma.17G041900 Glycine max
Glyma.20G092502 Glycine max
Gohir.A02G058400 Gossypium hirsutum
Gohir.A13G177600 Gossypium hirsutum
Gohir.D02G064200 Gossypium hirsutum
Gohir.D13G184200 Gossypium hirsutum
Gorai.005G072500 Gossypium raimondii
Gorai.013G209800 Gossypium raimondii
HanXRQChr07g0197201 Helianthus annuus
HanXRQChr09g0248281 Helianthus annuus
HanXRQChr09g0250221 Helianthus annuus
HanXRQChr10g0294291 Helianthus annuus
Haze_00767 Corylus avellana
Haze_03993 Corylus avellana
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla
HPP92_012769 Vanilla planifolia
Lalb_Chr02g0147571 Lupinus albus
Lalb_Chr06g0167311 Lupinus albus
Lalb_Chr07g0181591 Lupinus albus
Lalb_Chr13g0299031 Lupinus albus
Lj1P1189T59 Lonicera japonica
Lj4g0025064 Lotus japonicus
Lj5g0018140 Lotus japonicus
Lj5P319T26 Lonicera japonica
Lj6P701T18 Lonicera japonica
Lsat_1_v5_gn_7_63941 Lactuca sativa
Manes.08G107700 Manihot esculenta
Manes.11G020800 Manihot esculenta
MBI19_g47476_MAGBIO Magnolia biondii
MD13G1139400 Malus domestica
MD16G1136300 Malus domestica
Medtr1g484850 Medicago truncatula
Medtr4g124100 Medicago truncatula
MELO3C006751.2 Cucumis melo
MELO3C015242.2 Cucumis melo
Migut.B00879 Erythranthe guttata
Migut.B00880 Erythranthe guttata
Migut.B00893 Erythranthe guttata
Migut.N00971 Erythranthe guttata
Migut.O00762 Erythranthe guttata
MSTRG.16427 Avicennia marina
MSTRG.20352 Avicennia marina
Nitab4.5_0000039g0190 Nicotiana tabacum
Nitab4.5_0001334g0100 Nicotiana tabacum
Nitab4.5_0001808g0030 Nicotiana tabacum
Nitab4.5_0002485g0060 Nicotiana tabacum
Nitab4.5_0005904g0060 Nicotiana tabacum
Oeu016542.1 Olea europaea
Oeu020279.1 Olea europaea
Oeu023377.1 Olea europaea
Oeu023379.1 Olea europaea
Oeu034985.1 Olea europaea
Os01g0245600 Oryza sativa ssp. japonica
Os05g0136100 Oryza sativa ssp. japonica
Os05g0277200 Oryza sativa ssp. japonica
Peaxi162Scf00357g00013 Petunia axillaris
PGR031G0843 Punica granatum
PGSC0003DMG400020521 Solanum tuberosum
PGSC0003DMG400024495 Solanum tuberosum
PGSC0003DMG400044126 Solanum tuberosum
PGSC0003DMG400044873 Solanum tuberosum
PGSC0003DMG401019388 Solanum tuberosum
Phvul.003G123200 Phaseolus vulgaris
Phvul.007G204700 Phaseolus vulgaris
Potri.008G206600 Populus trichocarpa
Potri.010G002200 Populus trichocarpa
Prupe.1G105300 Prunus persica
Psat0s1206g0240 Pisum sativum
Psat6g155480 Pisum sativum
PSO170G4270 Papaver somniferum
PSO210G7784 Papaver somniferum
PSO761G0464 Papaver somniferum
QL03p010269 Quercus lobata
QL03p010503 Quercus lobata
QL06p014213 Quercus lobata
RcHm_v2.0_Chr3g0458411 Rosa chinensis
RcHm_v2.0_Chr4g0427521 Rosa chinensis
Rhsim11G0103200 Rhododendron simsii
Sabra08G0150300 Salix brachista
Sabra10G0001700 Salix brachista
SalBow4G1159 Salvia bowleyana
SalBow5G1243 Salvia bowleyana
Sc16g0009390 Simmondsia chinensis
Sed0001415 Sechium edule
Sed0007403 Sechium edule
Sed0010166 Sechium edule
SEGI_18442 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09705 Striga asiatica
Solyc01g101160.2 Solanum lycopersicum
Solyc03g114270.1 Solanum lycopersicum
Solyc10g011990.1 Solanum lycopersicum
Sopen01g044640 Solanum pennellii
Sopen03g033360 Solanum pennellii
Sopen10g005750 Solanum pennellii
Sp1g08120 Schrenkiella parvula
Sp3g15630 Schrenkiella parvula
TAR362G1252 Trochodendron aralioides
TAR633G0292 Trochodendron aralioides
TAR636G0250 Trochodendron aralioides
THA.LOC104816841 Tarenaya hassleriana
THA.LOC104820490 Tarenaya hassleriana
THA.LOC104821812 Tarenaya hassleriana
Thecc.04G313000 Theobroma cacao
Thecc.05G329300 Theobroma cacao
Thhalv10008580m.g Eutrema salsugineum
Thhalv10022081m.g Eutrema salsugineum
TPR.G12613 Trifolium pratense
TPR.G2590 Trifolium pratense
TWI09G0361 Tripterygium wilfordii
TWI56G0501 Tripterygium wilfordii
unitig_578.g15944 Utricularia gibba
unitig_578.g15945 Utricularia gibba
unitig_8.g4507 Utricularia gibba
vmacro01600 Vaccinium macrocarpon
vmacro22837 Vaccinium macrocarpon
VMungo0720G1780 Vigna mungo
VMungo1215G0793 Vigna mungo
Zm00001eb129830 Zea mays
Zm00001eb417400 Zea mays

User provided reference genes

Program Settings