Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39360 Brassica napus
A05p42110 Brassica napus
A06p36810 Brassica napus
Aa31LG11G10050 Aethionema arabicum
Aa31LG5G16380 Aethionema arabicum
Actinidia01652 Actinidia chinensis
Actinidia11705 Actinidia chinensis
Actinidia17726 Actinidia chinensis
Actinidia22843 Actinidia chinensis
Ah.02g121340 Amaranthus hybridus
Ah.03g147760 Amaranthus hybridus
AL3G16730 Arabidopsis lyrata
AL6G38390 Arabidopsis lyrata
Aqoxy5G02882 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23D8N6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RKP3NC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X07PWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X4I5LU Arachis hypogaea
AT3G05940 Arabidopsis thaliana
AT5G26740 Arabidopsis thaliana
ATR0693G156 Amborella trichopoda
Atru.chr12.1498 Acer truncatum
AUR62003552 Chenopodium quinoa
AUR62017866 Chenopodium quinoa
BcaB07g29962 Brassica carinata
BcaC03g17868 Brassica carinata
BcaC04g23623 Brassica carinata
BcaC05g30076 Brassica carinata
BcaNung02822 Brassica carinata
BcaNung03960 Brassica carinata
BolC2t11964H Brassica oleracea
BolC5t34791H Brassica oleracea
BolC7t44703H Brassica oleracea
BolC9t53558H Brassica oleracea
BraA02t08901Z Brassica rapa
BraA05t22929Z Brassica rapa
BraA06t26607Z Brassica rapa
C02p59090 Brassica napus
C05p61320 Brassica napus
C07p41680 Brassica napus
C09p06390 Brassica napus
CAN.G1379.38 Capsicum annuum
CANSAT54G1010 Cannabis sativa
CARHR080430 Cardamine hirsuta
CARHR186990 Cardamine hirsuta
Carub.0003s0534 Capsella rubella
Carub.0006s2419 Capsella rubella
Ca_09264_v3 Cicer arietinum L.
CBR_g20293 Chara braunii
Cc02_g36900 Coffea canephora
CDE05G1830 Ceratophyllum demersum
CDE11G0971 Ceratophyllum demersum
Cfa004400 Carpinus fangiana
Ciclev10028530m.g Citrus clementina
CiPaw.02G000200 Carya illinoinensis
ClCG02G014560 Citrullus lanatus
COL.COLO4_05471 Corchorus olitorius
Cpa.g.sc19.30 Carica papaya
Cre12.g502400 Chlamydomonas reinhardtii
CsaV3_2G007450 Cucumis sativus L.
CSS0001783 Camellia sinensis var. sinensis
CSS0003755 Camellia sinensis var. sinensis
CSS0009396 Camellia sinensis var. sinensis
CSS0012369 Camellia sinensis var. sinensis
CSS0015102 Camellia sinensis var. sinensis
CSS0023239 Camellia sinensis var. sinensis
CSS0025976 Camellia sinensis var. sinensis
CSS0026448 Camellia sinensis var. sinensis
CSS0029627 Camellia sinensis var. sinensis
CSS0029776 Camellia sinensis var. sinensis
CSS0035603 Camellia sinensis var. sinensis
CSS0050182 Camellia sinensis var. sinensis
DCAR_001878 Daucus carota
DCAR_003255 Daucus carota
DCAR_022330 Daucus carota
DCAR_029309 Daucus carota
Dinv24533 Davidia involucrata
Dinv30962 Davidia involucrata
Duzib128G1544 Durio zibethinus
Duzib177G0095 Durio zibethinus
ECA236G4154 Erigeron canadensis
EL10Ac6g15325 Beta vulgaris
Eucgr.B01358 Eucalyptus grandis
Eucgr.H01351 Eucalyptus grandis
FAN05G5115 Fragaria x ananassa
FvH4_6g08800 Fragaria vesca
Glyma.03G226700 Glycine max
Glyma.10G141000 Glycine max
Glyma.19G223700 Glycine max
Glyma.20G089700 Glycine max
Gohir.A11G275900 Gossypium hirsutum
Gohir.D11G286300 Gossypium hirsutum
Gorai.007G309700 Gossypium raimondii
GSVIVG01005282001 Vitis vinifera
HanXRQChr07g0193681 Helianthus annuus
HanXRQChr10g0293521 Helianthus annuus
HanXRQChr16g0518801 Helianthus annuus
Haze_15005 Corylus avellana
Haze_26433 Corylus avellana
Hma1.2p1_0052F.1_g030220 Hydrangea macrophylla
Hma1.2p1_0157F.1_g069480 Hydrangea macrophylla
HPP92_010864 Vanilla planifolia
HPP92_010865 Vanilla planifolia
HPP92_010911 Vanilla planifolia
HPP92_010916 Vanilla planifolia
Hund04395 Selenicereus undatus
Hund12702 Selenicereus undatus
Hund12783 Selenicereus undatus
Hund23017 Selenicereus undatus
Lalb_Chr06g0167191 Lupinus albus
Lalb_Chr07g0193041 Lupinus albus
Lj1g0010587 Lotus japonicus
Lj5C313G5 Lonicera japonica
Lj5g0007569 Lotus japonicus
Lj9A239T58 Lonicera japonica
Lsat_1_v5_gn_0_25741 Lactuca sativa
Lsat_1_v5_gn_5_101860 Lactuca sativa
Lsat_1_v5_gn_5_101940 Lactuca sativa
Lsat_1_v5_gn_9_84121 Lactuca sativa
Manes.08G105800 Manihot esculenta
Mapoly0177s0009 Marchantia polymorpha
MBI18_g03886_MAGBIO Magnolia biondii
MBI18_g28943_MAGBIO Magnolia biondii
MCO05G266 Micromonas commoda
MD04G1183500 Malus domestica
MD12G1196900 Malus domestica
Medtr7g111160 Medicago truncatula
MELO3C004140.2 Cucumis melo
Migut.B00681 Erythranthe guttata
Migut.N00992 Erythranthe guttata
MSTRG.20347 Avicennia marina
MSTRG.27901 Avicennia marina
MSTRG.5177 Avicennia marina
Nitab4.5_0000001g0310 Nicotiana tabacum
Nitab4.5_0001093g0040 Nicotiana tabacum
Nitab4.5_0001433g0080 Nicotiana tabacum
Nitab4.5_0003971g0010 Nicotiana tabacum
Nitab4.5_0004090g0130 Nicotiana tabacum
Nitab4.5_0004889g0020 Nicotiana tabacum
Nn4g25260 Nelumbo nucifera
Oeu002651.2 Olea europaea
Oeu006062.1 Olea europaea
Oeu033227.1 Olea europaea
Oeu061913.1 Olea europaea
Os03g0827600 Oryza sativa ssp. japonica
Os07g0244300 Oryza sativa ssp. japonica
Peaxi162Scf00071g00134 Petunia axillaris
Peaxi162Scf00194g00520 Petunia axillaris
PGR031G3159 Punica granatum
PGR119G1814 Punica granatum
PGSC0003DMG400018231 Solanum tuberosum
Phvul.001G220600 Phaseolus vulgaris
Phvul.007G207100 Phaseolus vulgaris
Potri.005G000232 Populus trichocarpa
Potri.005G000300 Populus trichocarpa
Potri.005G000600 Populus trichocarpa
Pp3c11_20710 Physcomitrium patens
Pp3c1_20320 Physcomitrium patens
Pp3c7_6310 Physcomitrium patens
PRCOL_00001267 Prasinoderma coloniale
PRCOL_00001371 Prasinoderma coloniale
Prupe.6G302000 Prunus persica
Psat0s4029g0080 Pisum sativum
PSO210G5864 Papaver somniferum
PSO761G0395 Papaver somniferum
QL03p011428 Quercus lobata
RcHm_v2.0_Chr3g0459061 Rosa chinensis
Rhsim05G0116900 Rhododendron simsii
Rhsim05G0117100 Rhododendron simsii
Rhsim11G0111200 Rhododendron simsii
Sabra05G0013400 Salix brachista
Sabra13G0080600 Salix brachista
SalBow1G5007 Salvia bowleyana
SalBow3G2107 Salvia bowleyana
Sc23g0003840 Simmondsia chinensis
Sed0000167 Sechium edule
Sed0022970 Sechium edule
SEGI_24145 Sequoiadendron giganteum
SEGI_26227 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34450 Striga asiatica
SGA_v2.0_scaffold311G48247 Striga asiatica
SHI18005 Sapria himalayana
SMO334G0078 Selaginella moellendorffii
SMO365G0052 Selaginella moellendorffii
Solyc01g102440.3 Solanum lycopersicum
Solyc01g102450.3 Solanum lycopersicum
Solyc01g102480.3 Solanum lycopersicum
Sopen01g044890 Solanum pennellii
Sopen01g044920 Solanum pennellii
Sp2g21400 Schrenkiella parvula
Sp3g04860 Schrenkiella parvula
TAR365G0992 Trochodendron aralioides
THA.LOC104802767 Tarenaya hassleriana
THA.LOC104818769 Tarenaya hassleriana
THA.LOC104822291 Tarenaya hassleriana
Thecc.05G331700 Theobroma cacao
Thhalv10004284m.g Eutrema salsugineum
Thhalv10020796m.g Eutrema salsugineum
TPR.G1637 Trifolium pratense
TPR.G8397 Trifolium pratense
TWI12G0658 Tripterygium wilfordii
unitig_22.g5794 Utricularia gibba
unitig_26.g9012 Utricularia gibba
vmacro01648 Vaccinium macrocarpon
vmacro19805 Vaccinium macrocarpon
VMungo0720G0176 Vigna mungo
VMungo1383G0366 Vigna mungo
Zm00001eb063290 Zea mays
Zm00001eb211390 Zea mays
Zm00001eb304160 Zea mays

User provided reference genes

Program Settings