Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p10660 Brassica napus
Aa31LG9G17520 Aethionema arabicum
Aa31LG9G17530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis
Actinidia28797 Actinidia chinensis
Actinidia35722 Actinidia chinensis
Ah.10g032470 Amaranthus hybridus
Ah.10g032480 Amaranthus hybridus
AL1G43210 Arabidopsis lyrata
AL7G46270 Arabidopsis lyrata
Aqoxy3G04075 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z93KCA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea
AT5G37510 Arabidopsis thaliana
ATR0118G003 Amborella trichopoda
Atru.chr1.2038 Acer truncatum
AUR62037782 Chenopodium quinoa
AUR62042225 Chenopodium quinoa
BcaB06g27086 Brassica carinata
BcaC02g09578 Brassica carinata
BolC4t26009H Brassica oleracea
BraA04t16733Z Brassica rapa
C04p44380 Brassica napus
CAN.G222.62 Capsicum annuum
CANSAT56G4352 Cannabis sativa
CARHR215400 Cardamine hirsuta
Carub.0007s3268 Capsella rubella
Ca_17086_v3 Cicer arietinum L.
Ca_19082_v3 Cicer arietinum L.
CBR_g44347 Chara braunii
CBR_g6354 Chara braunii
Cc00_g06720 Coffea canephora
Cc04_g05630 Coffea canephora
Cc07_g13220 Coffea canephora
CDE05G1041 Ceratophyllum demersum
CDE05G1320 Ceratophyllum demersum
Cfa007786 Carpinus fangiana
Cfa025667 Carpinus fangiana
Ciclev10019002m.g Citrus clementina
CiPaw.03G074100 Carya illinoinensis
ClCG05G010610 Citrullus lanatus
COL.COLO4_13315 Corchorus olitorius
Cpa.g.sc116.77 Carica papaya
Cre12.g535950 Chlamydomonas reinhardtii
CsaV3_3G017880 Cucumis sativus L.
CSS0018871 Camellia sinensis var. sinensis
CSS0022568 Camellia sinensis var. sinensis
CSS0039899 Camellia sinensis var. sinensis
CSS0049015 Camellia sinensis var. sinensis
DCAR_014159 Daucus carota
Dinv19049 Davidia involucrata
Dinv28178 Davidia involucrata
Duzib133G1400 Durio zibethinus
Duzib138G0925 Durio zibethinus
ECA238G3173 Erigeron canadensis
EL10Ac2g03207 Beta vulgaris
Eucgr.J01621 Eucalyptus grandis
Eucgr.J01637 Eucalyptus grandis
FAN19G0316 Fragaria x ananassa
FAN23G0774 Fragaria x ananassa
FAN26G0816 Fragaria x ananassa
FvH4_1g30070 Fragaria vesca
Glyma.11G214800 Glycine max
Glyma.18G041700 Glycine max
Gohir.A07G170100 Gossypium hirsutum
Gohir.A07G176600 Gossypium hirsutum
Gohir.D07G176300 Gossypium hirsutum
Gohir.D07G183900 Gossypium hirsutum
Gorai.001G197100 Gossypium raimondii
Gorai.001G204300 Gossypium raimondii
GSVIVG01030914001 Vitis vinifera
HanXRQChr07g0191741 Helianthus annuus
HanXRQChr14g0444641 Helianthus annuus
HanXRQChr17g0559491 Helianthus annuus
Haze_14285 Corylus avellana
Haze_26802 Corylus avellana
Haze_27240 Corylus avellana
Hma1.2p1_1425F.1_g282850 Hydrangea macrophylla
HPP92_020298 Vanilla planifolia
Hund13091 Selenicereus undatus
Hund13092 Selenicereus undatus
Lalb_Chr15g0085021 Lupinus albus
Lalb_Chr18g0053541 Lupinus albus
Lj6g0025109 Lotus japonicus
Lsat_1_v5_gn_3_63961 Lactuca sativa
Manes.01G120700 Manihot esculenta
Manes.02G078500 Manihot esculenta
Mapoly0153s0030 Marchantia polymorpha
MBI02_g13382_MAGBIO Magnolia biondii
MBI03_g10788_MAGBIO Magnolia biondii
MBI04_g33424_MAGBIO Magnolia biondii
MBI04_g33425_MAGBIO Magnolia biondii
MBI04_g33427_MAGBIO Magnolia biondii
MBI05_g08202_MAGBIO Magnolia biondii
MBI07_g04018_MAGBIO Magnolia biondii
MBI07_g04019_MAGBIO Magnolia biondii
MBI07_g04020_MAGBIO Magnolia biondii
MBI07_g42663_MAGBIO Magnolia biondii
MBI08_g02108_MAGBIO Magnolia biondii
MBI08_g02109_MAGBIO Magnolia biondii
MBI08_g23094_MAGBIO Magnolia biondii
MBI08_g40324_MAGBIO Magnolia biondii
MBI08_g40326_MAGBIO Magnolia biondii
MBI10_g09185_MAGBIO Magnolia biondii
MBI10_g09186_MAGBIO Magnolia biondii
MBI10_g09187_MAGBIO Magnolia biondii
MBI10_g32338_MAGBIO Magnolia biondii
MBI11_g22996_MAGBIO Magnolia biondii
MBI11_g42102_MAGBIO Magnolia biondii
MBI11_g42103_MAGBIO Magnolia biondii
MBI11_g42104_MAGBIO Magnolia biondii
MBI11_g42105_MAGBIO Magnolia biondii
MBI13_g29626_MAGBIO Magnolia biondii
MBI13_g29627_MAGBIO Magnolia biondii
MBI13_g29657_MAGBIO Magnolia biondii
MBI14_g28488_MAGBIO Magnolia biondii
MBI14_g31139_MAGBIO Magnolia biondii
MBI14_g31140_MAGBIO Magnolia biondii
MBI15_g03480_MAGBIO Magnolia biondii
MBI15_g03481_MAGBIO Magnolia biondii
MBI15_g03482_MAGBIO Magnolia biondii
MBI15_g03483_MAGBIO Magnolia biondii
MBI15_g22223_MAGBIO Magnolia biondii
MBI15_g42437_MAGBIO Magnolia biondii
MBI18_g02694_MAGBIO Magnolia biondii
MBI18_g16967_MAGBIO Magnolia biondii
MBI19_g09384_MAGBIO Magnolia biondii
MCO08G340 Micromonas commoda
MD09G1268900 Malus domestica
MD16G1264300 Malus domestica
MD16G1264400 Malus domestica
MD17G1267300 Malus domestica
Medtr3g065130 Medicago truncatula
MELO3C020331.2 Cucumis melo
Migut.H02232 Erythranthe guttata
Migut.K00926 Erythranthe guttata
Migut.M00197 Erythranthe guttata
MSTRG.15657 Avicennia marina
MSTRG.3699 Avicennia marina
Nitab4.5_0006562g0010 Nicotiana tabacum
Nitab4.5_0011135g0010 Nicotiana tabacum
Nn4g24447 Nelumbo nucifera
Oeu030292.1 Olea europaea
Oeu039332.1 Olea europaea
Oeu062704.1 Olea europaea
Oeu062706.1 Olea europaea
Os03g0713400 Oryza sativa ssp. japonica
Peaxi162Scf00464g00325 Petunia axillaris
PGR042G3530 Punica granatum
PGSC0003DMG400013309 Solanum tuberosum
Phvul.001G229000 Phaseolus vulgaris
Potri.004G082800 Populus trichocarpa
Potri.017G136133 Populus trichocarpa
Potri.017G136950 Populus trichocarpa
Pp3c19_19270 Physcomitrium patens
Pp3c1_34100 Physcomitrium patens
Pp3c1_34110 Physcomitrium patens
Pp3c1_34140 Physcomitrium patens
PRCOL_00000346 Prasinoderma coloniale
Prupe.3G165400 Prunus persica
Psat5g119880 Pisum sativum
PSO017G4553 Papaver somniferum
PSO478G1645 Papaver somniferum
QL02p059434 Quercus lobata
QL04p097132 Quercus lobata
QL08p053439 Quercus lobata
RcHm_v2.0_Chr3g0491991 Rosa chinensis
Rhsim08G0019700 Rhododendron simsii
Sabra17G0054900 Salix brachista
Sabra17G0112400 Salix brachista
SalBow5G3125 Salvia bowleyana
Sc14g0006900 Simmondsia chinensis
Sed0005557 Sechium edule
Sed0016313 Sechium edule
SEGI_04560 Sequoiadendron giganteum
SEGI_05320 Sequoiadendron giganteum
SEGI_21193 Sequoiadendron giganteum
SEGI_40032 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30966 Striga asiatica
SGA_v2.0_scaffold2G00947 Striga asiatica
SHI30113 Sapria himalayana
SMO331G0029 Selaginella moellendorffii
Solyc11g011470.2 Solanum lycopersicum
Sopen11g006260 Solanum pennellii
SpUN1596_0010 Schrenkiella parvula
SpUn1854_0010 Schrenkiella parvula
TAR371G0371 Trochodendron aralioides
TAR629G0765 Trochodendron aralioides
THA.LOC104805635 Tarenaya hassleriana
THA.LOC104822242 Tarenaya hassleriana
Thecc.04G063600 Theobroma cacao
Thecc.K0008100 Theobroma cacao
Thecc.K0008200 Theobroma cacao
Thhalv10027640m.g Eutrema salsugineum
TPR.G11234 Trifolium pratense
TPR.G18971 Trifolium pratense
TPR.G23206 Trifolium pratense
TWI74G0116 Tripterygium wilfordii
TWI77G0544 Tripterygium wilfordii
unitig_748.g8633 Utricularia gibba
vmacro18524 Vaccinium macrocarpon
VMungo0647G1524 Vigna mungo
VMungo1383G2082 Vigna mungo
Zm00001eb055050 Zea mays
Zm00001eb216210 Zea mays

User provided reference genes

Program Settings