Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05060 Brassica napus
A10p20930 Brassica napus
Aa31LG11G10980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.569 Anthoceros agrestis
Actinidia08303 Actinidia chinensis
Actinidia14316 Actinidia chinensis
Actinidia14317 Actinidia chinensis
Actinidia23419 Actinidia chinensis
Actinidia40234 Actinidia chinensis
AL6G29900 Arabidopsis lyrata
AL6G29910 Arabidopsis lyrata
Aqoxy2G03084 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CF3NAW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8T7D3 Arachis hypogaea
AT5G18630 Arabidopsis thaliana
AT5G18640 Arabidopsis thaliana
ATR0706G289 Amborella trichopoda
Atru.chr4.2774 Acer truncatum
Atru.chr4.2775 Acer truncatum
AUR62041197 Chenopodium quinoa
AUR62043024 Chenopodium quinoa
BcaB05g23343 Brassica carinata
BcaB05g23344 Brassica carinata
BcaB08g36656 Brassica carinata
BcaC03g13614 Brassica carinata
BolC2t06910H Brassica oleracea
BolC2t06911H Brassica oleracea
BolC9t58652H Brassica oleracea
BraA02t05463Z Brassica rapa
BraA02t05464Z Brassica rapa
BraA10t44158Z Brassica rapa
C02p10110 Brassica napus
C09p57820 Brassica napus
CAN.G256.11 Capsicum annuum
CAN.G556.1 Capsicum annuum
CANSAT78G2310 Cannabis sativa
CARHR194370 Cardamine hirsuta
CARHR194390 Cardamine hirsuta
Carub.0006s1691 Capsella rubella
Carub.0006s1693 Capsella rubella
Ca_00565_v3 Cicer arietinum L.
Cc03_g02230 Coffea canephora
Cc11_g03960 Coffea canephora
CDE05G3633 Ceratophyllum demersum
Cfa015352 Carpinus fangiana
Cfa025049 Carpinus fangiana
Ciclev10005298m.g Citrus clementina
CiPaw.01G152200 Carya illinoinensis
CiPaw.02G085700 Carya illinoinensis
ClCG05G005890 Citrullus lanatus
ClCG06G005380 Citrullus lanatus
COL.COLO4_13918 Corchorus olitorius
Cpa.g.sc16.128 Carica papaya
Cre06.g252800 Chlamydomonas reinhardtii
Cre14.g611552 Chlamydomonas reinhardtii
CsaV3_3G014240 Cucumis sativus L.
CsaV3_6G005740 Cucumis sativus L.
CSS0013073 Camellia sinensis var. sinensis
CSS0024611 Camellia sinensis var. sinensis
CSS0042129 Camellia sinensis var. sinensis
DCAR_002451 Daucus carota
DCAR_024550 Daucus carota
Dinv38316 Davidia involucrata
Duzib052G0697 Durio zibethinus
Duzib212G0515 Durio zibethinus
ECA246G1380 Erigeron canadensis
EL10Ac3g06566 Beta vulgaris
Eucgr.B01272 Eucalyptus grandis
Eucgr.H03719 Eucalyptus grandis
Eucgr.H03786 Eucalyptus grandis
Eucgr.H03825 Eucalyptus grandis
Eucgr.H03829 Eucalyptus grandis
Eucgr.H03839 Eucalyptus grandis
Eucgr.H03843 Eucalyptus grandis
Eucgr.H03849 Eucalyptus grandis
Eucgr.H03854 Eucalyptus grandis
Eucgr.L01655 Eucalyptus grandis
Eucgr.L03707 Eucalyptus grandis
FAN07G0890 Fragaria x ananassa
FAN12G0747 Fragaria x ananassa
FAN12G1680 Fragaria x ananassa
FAN17G1896 Fragaria x ananassa
FAN19G0011 Fragaria x ananassa
FAN22G0635 Fragaria x ananassa
FAN23G1699 Fragaria x ananassa
FAN28G1362 Fragaria x ananassa
FvH4_1g25590 Fragaria vesca
FvH4_4g17380 Fragaria vesca
Glyma.13G215800 Glycine max
Glyma.15G097100 Glycine max
Gohir.A02G046700 Gossypium hirsutum
Gohir.A09G062100 Gossypium hirsutum
Gohir.D02G052400 Gossypium hirsutum
Gohir.D09G061000 Gossypium hirsutum
Gorai.005G057700 Gossypium raimondii
Gorai.006G075600 Gossypium raimondii
GSVIVG01017792001 Vitis vinifera
HanXRQChr01g0003091 Helianthus annuus
HanXRQChr05g0139081 Helianthus annuus
HanXRQChr06g0174191 Helianthus annuus
HanXRQChr10g0288341 Helianthus annuus
HanXRQChr11g0349221 Helianthus annuus
HanXRQChr11g0349251 Helianthus annuus
HanXRQChr12g0381381 Helianthus annuus
HanXRQChr17g0539071 Helianthus annuus
Haze_01252 Corylus avellana
Hma1.2p1_0078F.1_g040770 Hydrangea macrophylla
HPP92_003149 Vanilla planifolia
HPP92_028679 Vanilla planifolia
Hund20592 Selenicereus undatus
Hund24917 Selenicereus undatus
Lalb_Chr18g0055681 Lupinus albus
Lalb_Chr20g0118081 Lupinus albus
Lj3C812T21 Lonicera japonica
Lj6A670G77 Lonicera japonica
LjContig00389g0009808 Lotus japonicus
Lsat_1_v5_gn_3_25841 Lactuca sativa
Manes.03G191800 Manihot esculenta
Manes.15G015900 Manihot esculenta
Mapoly0030s0070 Marchantia polymorpha
MCO05G463 Micromonas commoda
MCO13G553 Micromonas commoda
MCO16G387 Micromonas commoda
MD13G1172600 Malus domestica
MD16G1174000 Malus domestica
MD16G1174100 Malus domestica
Medtr2g020020 Medicago truncatula
MELO3C006617.2 Cucumis melo
MELO3C021361.2 Cucumis melo
Migut.G00197 Erythranthe guttata
MSTRG.10069 Avicennia marina
MSTRG.24781 Avicennia marina
Nitab4.5_0000829g0170 Nicotiana tabacum
Nitab4.5_0001054g0020 Nicotiana tabacum
Nitab4.5_0001459g0100 Nicotiana tabacum
Nitab4.5_0002986g0110 Nicotiana tabacum
Nn3g21340 Nelumbo nucifera
Nn4g25978 Nelumbo nucifera
Oeu044781.1 Olea europaea
Oeu062896.4 Olea europaea
Os01g0936200 Oryza sativa ssp. japonica
Os03g0348800 Oryza sativa ssp. japonica
Os05g0372400 Oryza sativa ssp. japonica
Os07g0668700 Oryza sativa ssp. japonica
Os11g0655800 Oryza sativa ssp. japonica
Peaxi162Scf00033g01320 Petunia axillaris
Peaxi162Scf00386g00812 Petunia axillaris
PGR004G1032 Punica granatum
PGR031G2101 Punica granatum
PGSC0003DMG400022655 Solanum tuberosum
PGSC0003DMG400030761 Solanum tuberosum
Phvul.006G162100 Phaseolus vulgaris
Potri.010G019500 Populus trichocarpa
Pp3c25_13720 Physcomitrium patens
Pp3c5_26430 Physcomitrium patens
Pp3c7_2230 Physcomitrium patens
PRCOL_00004646 Prasinoderma coloniale
PRCOL_00005353 Prasinoderma coloniale
Prupe.1G140800 Prunus persica
Psat1g187440 Pisum sativum
PSO170G5597 Papaver somniferum
QL06p007594 Quercus lobata
RcHm_v2.0_Chr2g0123761 Rosa chinensis
RcHm_v2.0_Chr4g0421311 Rosa chinensis
Rhsim02G0012700 Rhododendron simsii
Rhsim04G0217500 Rhododendron simsii
Sabra10G0010800 Salix brachista
SalBow2G1465 Salvia bowleyana
SalBow5G1864 Salvia bowleyana
SalBow5G3309 Salvia bowleyana
Sc13g0003570 Simmondsia chinensis
Sed0004895 Sechium edule
Sed0005192 Sechium edule
SGA_v2.0_scaffold62G21598 Striga asiatica
SMO115G0037 Selaginella moellendorffii
SMO340G0303 Selaginella moellendorffii
Solyc01g067380.4 Solanum lycopersicum
Solyc06g054550.3 Solanum lycopersicum
Sopen01g029260 Solanum pennellii
Sopen01g029270 Solanum pennellii
Sopen06g019620 Solanum pennellii
Sp6g25695 Schrenkiella parvula
Sp6g25700 Schrenkiella parvula
TAR633G2100 Trochodendron aralioides
TAR636G0688 Trochodendron aralioides
THA.LOC104802724 Tarenaya hassleriana
THA.LOC104827117 Tarenaya hassleriana
Thecc.04G279100 Theobroma cacao
Thhalv10013941m.g Eutrema salsugineum
Thhalv10013982m.g Eutrema salsugineum
TPR.G1488 Trifolium pratense
TPR.G1524 Trifolium pratense
TWI09G1509 Tripterygium wilfordii
TWI53G0545 Tripterygium wilfordii
TWI53G1343 Tripterygium wilfordii
TWI73G0946 Tripterygium wilfordii
vmacro08190 Vaccinium macrocarpon
vmacro15254 Vaccinium macrocarpon
vmacro22485 Vaccinium macrocarpon
VMungo0540G0576 Vigna mungo
Zm00001eb016740 Zea mays
Zm00001eb141920 Zea mays
Zm00001eb165770 Zea mays
Zm00001eb233360 Zea mays
Zm00001eb266000 Zea mays
Zm00001eb266010 Zea mays
Zm00001eb285400 Zea mays
Zm00001eb301760 Zea mays
Zm00001eb330150 Zea mays
Zm00001eb339690 Zea mays

User provided reference genes

Program Settings