Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p00210 Brassica napus
A06p48260 Brassica napus
Aa31LG10G1180 Aethionema arabicum
Aa31LG2G1910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2197 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2200 Anthoceros agrestis
Actinidia22086 Actinidia chinensis
Actinidia30555 Actinidia chinensis
Actinidia30556 Actinidia chinensis
Ah.04g153230 Amaranthus hybridus
Ah.13g075320 Amaranthus hybridus
AL1G63430 Arabidopsis lyrata
AL2G19130 Arabidopsis lyrata
Aqoxy2G00585 Aquilegia oxysepala
Aqoxy2G00586 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1MDK5L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6P03AF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G0TJBI Arachis hypogaea
AT1G55370 Arabidopsis thaliana
AT1G64770 Arabidopsis thaliana
ATR0697G035 Amborella trichopoda
ATR0697G052 Amborella trichopoda
Atru.chr2.1363 Acer truncatum
Atru.chr2.1364 Acer truncatum
AUR62032061 Chenopodium quinoa
AUR62032686 Chenopodium quinoa
BcaC02g10774 Brassica carinata
BcaC06g31750 Brassica carinata
BcaC08g43621 Brassica carinata
BolC4t24025H Brassica oleracea
BolC6t36111H Brassica oleracea
BraA06t23237Z Brassica rapa
BraA06t27695Z Brassica rapa
C04p25200 Brassica napus
C06p10350 Brassica napus
CAN.G317.14 Capsicum annuum
CAN.G317.15 Capsicum annuum
CANSAT56G4486 Cannabis sativa
CANSAT78G2239 Cannabis sativa
CARHR045040 Cardamine hirsuta
CARHR045100 Cardamine hirsuta
CARHR287400 Cardamine hirsuta
Carub.0001s4389 Capsella rubella
Carub.0002s0972 Capsella rubella
Carub.0002s0974 Capsella rubella
Ca_08260_v3 Cicer arietinum L.
CBR_g760 Chara braunii
Cc06_g22880 Coffea canephora
Cc06_g22890 Coffea canephora
CDE01G0333 Ceratophyllum demersum
CDE02G4790 Ceratophyllum demersum
CDE05G3425 Ceratophyllum demersum
Cfa016436 Carpinus fangiana
Ciclev10020539m.g Citrus clementina
Ciclev10020997m.g Citrus clementina
CiPaw.10G000700 Carya illinoinensis
CiPaw.10G000800 Carya illinoinensis
ClCG04G005290 Citrullus lanatus
ClCG10G013330 Citrullus lanatus
COL.COLO4_13607 Corchorus olitorius
COL.COLO4_13608 Corchorus olitorius
Cpa.g.sc51.108 Carica papaya
Cpa.g.sc51.109 Carica papaya
CsaV3_3G043290 Cucumis sativus L.
CsaV3_4G013300 Cucumis sativus L.
CSS0017996 Camellia sinensis var. sinensis
CSS0029701 Camellia sinensis var. sinensis
CSS0030388 Camellia sinensis var. sinensis
DCAR_013690 Daucus carota
Dinv14582 Davidia involucrata
Dinv14583 Davidia involucrata
Duzib128G0833 Durio zibethinus
Duzib128G1885 Durio zibethinus
ECA233G1992 Erigeron canadensis
ECA233G2280 Erigeron canadensis
EL10Ac3g06815 Beta vulgaris
Eucgr.K01496 Eucalyptus grandis
Eucgr.K01497 Eucalyptus grandis
FAN02G2038 Fragaria x ananassa
FAN05G4616 Fragaria x ananassa
FAN09G1185 Fragaria x ananassa
FAN12G2339 Fragaria x ananassa
FAN12G2392 Fragaria x ananassa
FAN14G1820 Fragaria x ananassa
FAN17G0084 Fragaria x ananassa
FAN17G0654 Fragaria x ananassa
FAN19G2054 Fragaria x ananassa
FAN23G0456 Fragaria x ananassa
FAN26G2862 Fragaria x ananassa
FvH4_1g28070 Fragaria vesca
FvH4_4g18551 Fragaria vesca
FvH4_4g18560 Fragaria vesca
FvH4_6g27680 Fragaria vesca
Glyma.02G071800 Glycine max
Glyma.16G041700 Glycine max
Glyma.16G153000 Glycine max
Glyma.19G110700 Glycine max
Gohir.A11G258700 Gossypium hirsutum
Gohir.A11G258800 Gossypium hirsutum
Gohir.D11G268800 Gossypium hirsutum
Gohir.D11G268900 Gossypium hirsutum
Gorai.007G288600 Gossypium raimondii
Gorai.007G288700 Gossypium raimondii
GSVIVG01033392001 Vitis vinifera
GSVIVG01033393001 Vitis vinifera
HanXRQChr02g0054161 Helianthus annuus
HanXRQChr13g0398041 Helianthus annuus
Haze_11184 Corylus avellana
Haze_11188 Corylus avellana
Haze_11191 Corylus avellana
Haze_19413 Corylus avellana
Hma1.2p1_0152F.1_g067770 Hydrangea macrophylla
Hma1.2p1_0376F.1_g139160 Hydrangea macrophylla
Hma1.2p1_2695F.1_g327030 Hydrangea macrophylla
Hund19240 Selenicereus undatus
Hund24838 Selenicereus undatus
Lalb_Chr06g0173971 Lupinus albus
Lalb_Chr22g0359271 Lupinus albus
Lj1A1137T81 Lonicera japonica
Lj1g0023757 Lotus japonicus
Lj2C357T24 Lonicera japonica
Lj2g0018565 Lotus japonicus
Lsat_1_v5_gn_6_36901 Lactuca sativa
Lsat_1_v5_gn_6_36921 Lactuca sativa
Manes.09G141900 Manihot esculenta
Manes.09G142000 Manihot esculenta
Mapoly0135s0022 Marchantia polymorpha
MD14G1002400 Malus domestica
MD17G1264700 Malus domestica
Medtr6g032880 Medicago truncatula
Medtr7g085490 Medicago truncatula
MELO3C008799.2 Cucumis melo
MELO3C026889.2 Cucumis melo
Migut.J01892 Erythranthe guttata
Migut.J01893 Erythranthe guttata
MSTRG.19937 Avicennia marina
Nitab4.5_0000001g0080 Nicotiana tabacum
Nitab4.5_0002825g0020 Nicotiana tabacum
Nn7g35822 Nelumbo nucifera
Nn7g35823 Nelumbo nucifera
Oeu012405.1 Olea europaea
Oeu060006.1 Olea europaea
Os03g0158300 Oryza sativa ssp. japonica
Os03g0748300 Oryza sativa ssp. japonica
Peaxi162Scf00076g01038 Petunia axillaris
Peaxi162Scf00076g01039 Petunia axillaris
PGR142G0348 Punica granatum
PGR142G1693 Punica granatum
PGSC0003DMG400008639 Solanum tuberosum
PGSC0003DMG400008640 Solanum tuberosum
Phvul.001G110100 Phaseolus vulgaris
Phvul.004G079500 Phaseolus vulgaris
Potri.013G058601 Populus trichocarpa
Potri.019G034000 Populus trichocarpa
Potri.019G034100 Populus trichocarpa
Pp3c25_5270 Physcomitrium patens
Prupe.3G114100 Prunus persica
Prupe.7G003600 Prunus persica
Psat0s2522g0120 Pisum sativum
Psat3g089080 Pisum sativum
PSO339G1718 Papaver somniferum
PSO339G4182 Papaver somniferum
PSO384G0936 Papaver somniferum
QL07p019702 Quercus lobata
QL07p019728 Quercus lobata
QL07p020062 Quercus lobata
RcHm_v2.0_Chr2g0130821 Rosa chinensis
RcHm_v2.0_Chr3g0497181 Rosa chinensis
Rhsim03G0001300 Rhododendron simsii
Rhsim03G0001400 Rhododendron simsii
Rhsim03G0005300 Rhododendron simsii
Rhsim09G0004800 Rhododendron simsii
Rhsim11G0022200 Rhododendron simsii
Sabra19G0041900 Salix brachista
Sabra19G0042000 Salix brachista
SalBow6G7123 Salvia bowleyana
Sed0011624 Sechium edule
Sed0025392 Sechium edule
SEGI_06106 Sequoiadendron giganteum
SMO275G0062 Selaginella moellendorffii
Solyc03g062710.4 Solanum lycopersicum
Solyc03g062720.3 Solanum lycopersicum
Sopen03g015020 Solanum pennellii
Sopen03g015030 Solanum pennellii
Sp1g41050 Schrenkiella parvula
Sp2g07380 Schrenkiella parvula
TAR623G0562 Trochodendron aralioides
TAR623G0824 Trochodendron aralioides
THA.LOC104805763 Tarenaya hassleriana
THA.LOC104805764 Tarenaya hassleriana
THA.LOC104807097 Tarenaya hassleriana
THA.LOC104814754 Tarenaya hassleriana
THA.LOC104816712 Tarenaya hassleriana
Thecc.05G293800 Theobroma cacao
Thecc.05G293900 Theobroma cacao
Thhalv10011597m.g Eutrema salsugineum
Thhalv10018808m.g Eutrema salsugineum
TPR.G34627 Trifolium pratense
TPR.G39773 Trifolium pratense
TPR.G5890 Trifolium pratense
TWI32G0868 Tripterygium wilfordii
TWI60G0442 Tripterygium wilfordii
unitig_37.g12787 Utricularia gibba
vmacro12569 Vaccinium macrocarpon
vmacro12570 Vaccinium macrocarpon
VMungo0464G0063 Vigna mungo
VMungo1383G0405 Vigna mungo
Zm00001eb004410 Zea mays
Zm00001eb057170 Zea mays
Zm00001eb403240 Zea mays

User provided reference genes

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