Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p41920 Brassica napus
A09p03090 Brassica napus
Aa31LG2G5970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1920 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3371 Anthoceros agrestis
Actinidia15096 Actinidia chinensis
Ah.03g133020 Amaranthus hybridus
AL5G15360 Arabidopsis lyrata
Aqoxy3G01213 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9P3HYP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E5Z9NB Arachis hypogaea
AT3G26570 Arabidopsis thaliana
ATR0730G048 Amborella trichopoda
ATR0824G202 Amborella trichopoda
Atru.chr11.2096 Acer truncatum
Atru.chr11.2097 Acer truncatum
AUR62005463 Chenopodium quinoa
AUR62024277 Chenopodium quinoa
BcaC04g23931 Brassica carinata
BcaC06g31064 Brassica carinata
BcaC06g33901 Brassica carinata
BcaC06g33902 Brassica carinata
BolC7t44079H Brassica oleracea
BolC9t53249H Brassica oleracea
BraA06t27111Z Brassica rapa
BraA09t35947Z Brassica rapa
C07p35550 Brassica napus
C09p03240 Brassica napus
CAN.G832.1 Capsicum annuum
CANSAT01G2197 Cannabis sativa
CARHR147580 Cardamine hirsuta
Carub.0005s0456 Capsella rubella
Ca_22585_v3 Cicer arietinum L.
CBR_g17746 Chara braunii
CBR_g17753 Chara braunii
CBR_g17754 Chara braunii
CBR_g40045 Chara braunii
CBR_g40051 Chara braunii
CBR_g40059 Chara braunii
CBR_g4611 Chara braunii
CBR_g48724 Chara braunii
CBR_g48731 Chara braunii
CBR_g49563 Chara braunii
CBR_g9141 Chara braunii
Cc11_g15740 Coffea canephora
CDE04G2624 Ceratophyllum demersum
CDE07G1933 Ceratophyllum demersum
Cfa009211 Carpinus fangiana
Cfa021465 Carpinus fangiana
Ciclev10023428m.g Citrus clementina
Ciclev10031076m.g Citrus clementina
CiPaw.05G182400 Carya illinoinensis
ClCG05G025750 Citrullus lanatus
COL.COLO4_24275 Corchorus olitorius
Cpa.g.sc33.20 Carica papaya
Cre02.g144600 Chlamydomonas reinhardtii
Cre02.g144650 Chlamydomonas reinhardtii
Cre02.g144700 Chlamydomonas reinhardtii
Cre02.g144750 Chlamydomonas reinhardtii
Cre07.g325740 Chlamydomonas reinhardtii
Cre07.g325741 Chlamydomonas reinhardtii
Cre12.g489400 Chlamydomonas reinhardtii
Cre12.g491600 Chlamydomonas reinhardtii
Cre12.g493404 Chlamydomonas reinhardtii
Cre12.g495953 Chlamydomonas reinhardtii
Cre16.g655200 Chlamydomonas reinhardtii
Cre16.g676757 Chlamydomonas reinhardtii
CsaV3_5G031110 Cucumis sativus L.
CSS0004236 Camellia sinensis var. sinensis
CSS0025345 Camellia sinensis var. sinensis
DCAR_024429 Daucus carota
DCAR_026513 Daucus carota
Dinv09261 Davidia involucrata
Dinv09282 Davidia involucrata
Dinv24783 Davidia involucrata
Duzib248G0244 Durio zibethinus
Duzib251G0314 Durio zibethinus
ECA233G5985 Erigeron canadensis
EL10Ac6g13808 Beta vulgaris
Eucgr.B03285 Eucalyptus grandis
Eucgr.H02499 Eucalyptus grandis
FAN05G4042 Fragaria x ananassa
FAN07G0157 Fragaria x ananassa
FAN12G0137 Fragaria x ananassa
FAN17G2214 Fragaria x ananassa
FAN22G1441 Fragaria x ananassa
FvH4_4g25560 Fragaria vesca
Glyma.08G282100 Glycine max
Glyma.18G144100 Glycine max
Gohir.A03G135300 Gossypium hirsutum
Gohir.D02G158800 Gossypium hirsutum
Gorai.005G178500 Gossypium raimondii
GSVIVG01005753001 Vitis vinifera
HanXRQChr08g0208181 Helianthus annuus
HanXRQChr17g0538531 Helianthus annuus
Haze_12248 Corylus avellana
Hma1.2p1_0223F.1_g093940 Hydrangea macrophylla
Hma1.2p1_0223F.1_g093950 Hydrangea macrophylla
HPP92_004612 Vanilla planifolia
HPP92_004613 Vanilla planifolia
HPP92_004619 Vanilla planifolia
Lalb_Chr05g0216571 Lupinus albus
Lalb_Chr16g0381901 Lupinus albus
Lalb_Chr16g0381911 Lupinus albus
Lj2g0004909 Lotus japonicus
Lj4g0008501 Lotus japonicus
Lj6A812T47 Lonicera japonica
Lsat_1_v5_gn_8_152120 Lactuca sativa
Manes.12G023200 Manihot esculenta
Mapoly0006s0161 Marchantia polymorpha
Mapoly0006s0162 Marchantia polymorpha
Mapoly0006s0163 Marchantia polymorpha
Mapoly0006s0164 Marchantia polymorpha
Mapoly0006s0165 Marchantia polymorpha
Mapoly0006s0166 Marchantia polymorpha
Mapoly0008s0184 Marchantia polymorpha
Mapoly0044s0116 Marchantia polymorpha
Mapoly0054s0118 Marchantia polymorpha
Mapoly0054s0122 Marchantia polymorpha
Mapoly0054s0123 Marchantia polymorpha
Mapoly0054s0124 Marchantia polymorpha
Mapoly0054s0125 Marchantia polymorpha
Mapoly0054s0126 Marchantia polymorpha
Mapoly0054s0127 Marchantia polymorpha
Mapoly0054s0128 Marchantia polymorpha
Mapoly0070s0002 Marchantia polymorpha
Mapoly0070s0073 Marchantia polymorpha
Mapoly0090s0004 Marchantia polymorpha
Mapoly0098s0054 Marchantia polymorpha
Mapoly0098s0056 Marchantia polymorpha
Mapoly0126s0001 Marchantia polymorpha
Mapoly0126s0002 Marchantia polymorpha
Mapoly0126s0004 Marchantia polymorpha
Mapoly0126s0023 Marchantia polymorpha
Mapoly0126s0024 Marchantia polymorpha
Mapoly0138s0013 Marchantia polymorpha
Mapoly0172s0002 Marchantia polymorpha
Mapoly0172s0005 Marchantia polymorpha
MBI10_g03714_MAGBIO Magnolia biondii
MCO04G206 Micromonas commoda
MD13G1101400 Malus domestica
MD16G1102200 Malus domestica
Medtr2g010140 Medicago truncatula
Medtr8g069390 Medicago truncatula
MELO3C011950.2 Cucumis melo
Migut.K00598 Erythranthe guttata
MSTRG.13352 Avicennia marina
MSTRG.566 Avicennia marina
MSTRG.7932 Avicennia marina
Nitab4.5_0000007g0040 Nicotiana tabacum
Nitab4.5_0000370g0100 Nicotiana tabacum
Nitab4.5_0003609g0020 Nicotiana tabacum
Nitab4.5_0010104g0010 Nicotiana tabacum
Nn4g22620 Nelumbo nucifera
Oeu038630.2 Olea europaea
Oeu056711.1 Olea europaea
Os02g0593500 Oryza sativa ssp. japonica
Peaxi162Scf00076g00027 Petunia axillaris
Peaxi162Scf00128g00139 Petunia axillaris
PGR102G1504 Punica granatum
PGR119G0064 Punica granatum
PGSC0003DMG400018604 Solanum tuberosum
Phvul.003G064900 Phaseolus vulgaris
Potri.008G186601 Populus trichocarpa
Potri.010G046300 Populus trichocarpa
Pp3c15_12150 Physcomitrium patens
Pp3c15_12220 Physcomitrium patens
Pp3c16_25600 Physcomitrium patens
Pp3c22_22230 Physcomitrium patens
Pp3c22_22231 Physcomitrium patens
Pp3c9_7350 Physcomitrium patens
PRCOL_00002281 Prasinoderma coloniale
Prupe.1G244400 Prunus persica
Psat4g115400 Pisum sativum
PSO017G3346 Papaver somniferum
PSO017G4818 Papaver somniferum
PSO478G2352 Papaver somniferum
PSO478G3818 Papaver somniferum
QL03p058091 Quercus lobata
RcHm_v2.0_Chr4g0432971 Rosa chinensis
Rhsim12G0110200 Rhododendron simsii
Sabra08G0141400 Salix brachista
Sabra10G0022500 Salix brachista
SalBow2G2862 Salvia bowleyana
Sc04g0009480 Simmondsia chinensis
Sed0007009 Sechium edule
SEGI_12078 Sequoiadendron giganteum
SEGI_17608 Sequoiadendron giganteum
SEGI_19705 Sequoiadendron giganteum
SEGI_23417 Sequoiadendron giganteum
SEGI_27895 Sequoiadendron giganteum
SGA_v2.0_scaffold476G52135 Striga asiatica
SMO118G0341 Selaginella moellendorffii
SMO367G0749 Selaginella moellendorffii
Solyc05g013510.4 Solanum lycopersicum
Sopen05g008390 Solanum pennellii
Sp2g15680 Schrenkiella parvula
TAR374G0119 Trochodendron aralioides
TAR622G0245 Trochodendron aralioides
TAR622G1180 Trochodendron aralioides
TAR629G1948 Trochodendron aralioides
THA.LOC104825663 Tarenaya hassleriana
Thecc.02G259900 Theobroma cacao
Thhalv10003891m.g Eutrema salsugineum
TPR.G17752 Trifolium pratense
TWI18G1442 Tripterygium wilfordii
TWI36G1175 Tripterygium wilfordii
unitig_747.g21153 Utricularia gibba
vmacro16195 Vaccinium macrocarpon
VMungo0251G2727 Vigna mungo
Zm00001eb245920 Zea mays

User provided reference genes

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