Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p04120 Brassica napus
Aa31LG1G19210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1597 Anthoceros agrestis
Actinidia25640 Actinidia chinensis
Actinidia25641 Actinidia chinensis
Actinidia35275 Actinidia chinensis
Actinidia35276 Actinidia chinensis
AL1G15260 Arabidopsis lyrata
Aqoxy2G03403 Aquilegia oxysepala
Aqoxy5G00455 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2A778E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ETQ115 Arachis hypogaea
AT1G05410 Arabidopsis thaliana
ATR0697G249 Amborella trichopoda
Atru.chr4.2451 Acer truncatum
AUR62008677 Chenopodium quinoa
AUR62025569 Chenopodium quinoa
BcaB02g06862 Brassica carinata
BcaB05g24279 Brassica carinata
BcaB05g24280 Brassica carinata
BcaC05g24388 Brassica carinata
BcaC05g24390 Brassica carinata
BcaC05g24391 Brassica carinata
BolC5t29153H Brassica oleracea
BraA10t42682Z Brassica rapa
C05p03760 Brassica napus
CAN.G1094.5 Capsicum annuum
CAN.G1094.7 Capsicum annuum
CAN.G231.1 Capsicum annuum
CAN.G231.2 Capsicum annuum
CANSAT78G2304 Cannabis sativa
CARHR004920 Cardamine hirsuta
CARHR054150 Cardamine hirsuta
CARHR054160 Cardamine hirsuta
Carub.0001s0475 Capsella rubella
Ca_10889_v3 Cicer arietinum L.
Ca_24401_v3 Cicer arietinum L.
Ca_30336_v3 Cicer arietinum L.
CBR_g48542 Chara braunii
Cc03_g03900 Coffea canephora
Cc06_g18330 Coffea canephora
Cfa015661 Carpinus fangiana
Ciclev10004835m.g Citrus clementina
CiPaw.01G167300 Carya illinoinensis
CiPaw.02G097800 Carya illinoinensis
ClCG05G005130 Citrullus lanatus
COL.COLO4_21490 Corchorus olitorius
Cpa.g.c40440 Carica papaya
Cpa.g.sc1512.1 Carica papaya
Cpa.g.sc58.96 Carica papaya
CsaV3_3G013260 Cucumis sativus L.
CSS0030672 Camellia sinensis var. sinensis
CSS0040917 Camellia sinensis var. sinensis
DCAR_001270 Daucus carota
DCAR_002383 Daucus carota
DCAR_027222 Daucus carota
DCAR_027223 Daucus carota
DCAR_027224 Daucus carota
DCAR_027225 Daucus carota
DCAR_030641 Daucus carota
Dinv14001 Davidia involucrata
Dinv44542 Davidia involucrata
Duzib052G0544 Durio zibethinus
ECA240G1510 Erigeron canadensis
EL10Ac7g17523 Beta vulgaris
Eucgr.H03453 Eucalyptus grandis
Eucgr.H03454 Eucalyptus grandis
Eucgr.H03457 Eucalyptus grandis
FAN07G1764 Fragaria x ananassa
FAN12G2226 Fragaria x ananassa
FAN22G0721 Fragaria x ananassa
FvH4_4g16310 Fragaria vesca
Glyma.01G237400 Glycine max
Glyma.11G006000 Glycine max
Glyma.18G119500 Glycine max
Glyma.18G202950 Glycine max
Gohir.A09G056601 Gossypium hirsutum
Gohir.D09G055900 Gossypium hirsutum
Gorai.006G069200 Gossypium raimondii
GSVIVG01017991001 Vitis vinifera
GSVIVG01017993001 Vitis vinifera
HanXRQChr09g0248261 Helianthus annuus
Haze_00887 Corylus avellana
Hma1.2p1_0602F.1_g187400 Hydrangea macrophylla
HPP92_009611 Vanilla planifolia
Hund12120 Selenicereus undatus
Lalb_Chr05g0211011 Lupinus albus
Lalb_Chr09g0319891 Lupinus albus
Lalb_Chr25g0279741 Lupinus albus
Lj5g0003807 Lotus japonicus
Lj6C607G12 Lonicera japonica
LjContig00408g0013219 Lotus japonicus
Lsat_1_v5_gn_7_64380 Lactuca sativa
Manes.03G177500 Manihot esculenta
MBI12_g36454_MAGBIO Magnolia biondii
MD13G1194400 Malus domestica
Medtr1g103600 Medicago truncatula
Medtr5g006390 Medicago truncatula
MELO3C006528.2 Cucumis melo
Migut.N00190 Erythranthe guttata
MSTRG.24737 Avicennia marina
Nitab4.5_0000321g0110 Nicotiana tabacum
Nitab4.5_0001342g0020 Nicotiana tabacum
Nitab4.5_0001342g0030 Nicotiana tabacum
Nitab4.5_0001342g0080 Nicotiana tabacum
Nitab4.5_0001920g0010 Nicotiana tabacum
Nitab4.5_0001920g0020 Nicotiana tabacum
Nitab4.5_0002666g0010 Nicotiana tabacum
Nitab4.5_0004256g0010 Nicotiana tabacum
Nitab4.5_0008118g0010 Nicotiana tabacum
Nn1g02344 Nelumbo nucifera
Nn6g34080 Nelumbo nucifera
Oeu049061.1 Olea europaea
Os03g0747200 Oryza sativa ssp. japonica
Peaxi162Scf00092g00617 Petunia axillaris
Peaxi162Scf00192g00112 Petunia axillaris
PGR004G0591 Punica granatum
PGR004G0723 Punica granatum
PGR004G2032 Punica granatum
PGR004G2151 Punica granatum
PGSC0003DMG400006740 Solanum tuberosum
PGSC0003DMG400016262 Solanum tuberosum
PGSC0003DMG400023100 Solanum tuberosum
PGSC0003DMG400030174 Solanum tuberosum
PGSC0003DMG400030175 Solanum tuberosum
PGSC0003DMG400030176 Solanum tuberosum
PGSC0003DMG400032262 Solanum tuberosum
PGSC0003DMG400039774 Solanum tuberosum
PGSC0003DMG400040415 Solanum tuberosum
PGSC0003DMG400041970 Solanum tuberosum
Phvul.002G044800 Phaseolus vulgaris
Phvul.002G045300 Phaseolus vulgaris
Potri.010G086600 Populus trichocarpa
Pp3c15_9060 Physcomitrium patens
Pp3c9_22000 Physcomitrium patens
Pp3c9_22005 Physcomitrium patens
Prupe.1G015300 Prunus persica
Psat0s3046g0120 Pisum sativum
Psat4g210160 Pisum sativum
Psat6g188240 Pisum sativum
Psat6g206800 Pisum sativum
PSO210G1140 Papaver somniferum
PSO210G5071 Papaver somniferum
PSO761G0482 Papaver somniferum
PSO832G3307 Papaver somniferum
QL06p002114 Quercus lobata
RcHm_v2.0_Chr4g0416001 Rosa chinensis
RhsimUnG0259000 Rhododendron simsii
Sabra10G0056900 Salix brachista
SalBow3G1993 Salvia bowleyana
Sc19g0004070 Simmondsia chinensis
Sed0019594 Sechium edule
Sed0023955 Sechium edule
SEGI_19972 Sequoiadendron giganteum
SEGI_25190 Sequoiadendron giganteum
SEGI_29846 Sequoiadendron giganteum
SEGI_30321 Sequoiadendron giganteum
SGA_v2.0_scaffold522G52706 Striga asiatica
SHI34763 Sapria himalayana
Solyc06g054160.2 Solanum lycopersicum
Solyc06g054170.1 Solanum lycopersicum
Solyc06g054180.1 Solanum lycopersicum
Solyc06g054190.1 Solanum lycopersicum
Solyc06g054200.3 Solanum lycopersicum
Solyc06g054210.1 Solanum lycopersicum
Solyc06g054230.4 Solanum lycopersicum
Solyc09g059740.3 Solanum lycopersicum
Solyc09g059860.1 Solanum lycopersicum
Solyc09g059870.1 Solanum lycopersicum
Solyc09g059890.2 Solanum lycopersicum
Solyc09g059900.1 Solanum lycopersicum
Solyc09g059910.3 Solanum lycopersicum
Solyc09g060010.1 Solanum lycopersicum
Solyc09g060020.1 Solanum lycopersicum
Solyc09g060060.1 Solanum lycopersicum
Solyc09g061260.2 Solanum lycopersicum
Solyc09g061360.1 Solanum lycopersicum
Solyc09g061370.1 Solanum lycopersicum
Solyc09g061490.1 Solanum lycopersicum
Solyc09g061500.2 Solanum lycopersicum
Solyc09g061540.1 Solanum lycopersicum
Solyc09g061580.1 Solanum lycopersicum
Solyc09g061590.1 Solanum lycopersicum
Solyc09g061600.1 Solanum lycopersicum
Solyc09g082140.4 Solanum lycopersicum
Solyc10g018690.1 Solanum lycopersicum
Sopen06g019310 Solanum pennellii
Sopen06g019340 Solanum pennellii
Sopen06g019350 Solanum pennellii
Sopen09g023100 Solanum pennellii
Sopen09g024360 Solanum pennellii
Sopen09g024540 Solanum pennellii
Sopen09g031020 Solanum pennellii
Sp1g04290 Schrenkiella parvula
TAR633G1510 Trochodendron aralioides
THA.LOC104800959 Tarenaya hassleriana
Thecc.04G233500 Theobroma cacao
Thhalv10007544m.g Eutrema salsugineum
TPR.G37906 Trifolium pratense
TPR.G37995 Trifolium pratense
TPR.G5474 Trifolium pratense
TPR.G5530 Trifolium pratense
TPR.G5553 Trifolium pratense
TWI09G0550 Tripterygium wilfordii
TWI53G2057 Tripterygium wilfordii
TWI73G0819 Tripterygium wilfordii
vmacro09557 Vaccinium macrocarpon
vmacro09558 Vaccinium macrocarpon
VMungo0720G2758 Vigna mungo
VMungo1215G2555 Vigna mungo
Zm00001eb057100 Zea mays

User provided reference genes

Program Settings