Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p16890 Brassica napus
A03p17210 Brassica napus
A04p23500 Brassica napus
A08p35910 Brassica napus
A09p27500 Brassica napus
A09p27510 Brassica napus
A10p05260 Brassica napus
Aa31LG1G7700 Aethionema arabicum
Aa31LG6G9100 Aethionema arabicum
Actinidia18852 Actinidia chinensis
Actinidia27823 Actinidia chinensis
Actinidia35167 Actinidia chinensis
Ah.01g001900 Amaranthus hybridus
AL1G16670 Arabidopsis lyrata
AL4G25750 Arabidopsis lyrata
Aqoxy1G01562 Aquilegia oxysepala
Aqoxy4G00020 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0D8J24 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1PUV9L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FIF49B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QM6TI7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RBT75F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XDTP3U Arachis hypogaea
AT1G06660 Arabidopsis thaliana
AT2G30820 Arabidopsis thaliana
ATR0763G034 Amborella trichopoda
Atru.chr6.2025 Acer truncatum
AUR62015130 Chenopodium quinoa
AUR62017590 Chenopodium quinoa
BcaB01g04080 Brassica carinata
BcaB06g28387 Brassica carinata
BcaB06g28449 Brassica carinata
BcaC01g06015 Brassica carinata
BcaC02g11595 Brassica carinata
BcaC07g36797 Brassica carinata
BcaNung05938 Brassica carinata
BolC1t05873H Brassica oleracea
BolC1t05875H Brassica oleracea
BolC3t14406H Brassica oleracea
BolC4t27493H Brassica oleracea
BolC5t29257H Brassica oleracea
BolC8t47062H Brassica oleracea
BolC8t47458H Brassica oleracea
BraA03t10994Z Brassica rapa
BraA04t17877Z Brassica rapa
BraA06t23643Z Brassica rapa
BraA08t35498Z Brassica rapa
BraA10t42791Z Brassica rapa
BraA10t43996Z Brassica rapa
C03p20320 Brassica napus
C04p59920 Brassica napus
C05p04850 Brassica napus
C05p45070 Brassica napus
C08p02660 Brassica napus
CAN.G1500.6 Capsicum annuum
CAN.G275.13 Capsicum annuum
CAN.G275.14 Capsicum annuum
CANSAT64G1833 Cannabis sativa
CARHR006330 Cardamine hirsuta
CARHR124290 Cardamine hirsuta
Carub.0001s0599 Capsella rubella
Carub.0004s1203 Capsella rubella
Ca_06258_v3 Cicer arietinum L.
Ca_14585_v3 Cicer arietinum L.
CBR_g19606 Chara braunii
CBR_g3991 Chara braunii
Cc08_g11750 Coffea canephora
Cc08_g11770 Coffea canephora
CDE05G1606 Ceratophyllum demersum
Cfa017795 Carpinus fangiana
Cfa023559 Carpinus fangiana
Ciclev10031282m.g Citrus clementina
CiPaw.03G190500 Carya illinoinensis
ClCG07G010750 Citrullus lanatus
COL.COLO4_04817 Corchorus olitorius
COL.COLO4_37405 Corchorus olitorius
Cpa.g.sc50.118 Carica papaya
CsaV3_4G007570 Cucumis sativus L.
CSS0030132 Camellia sinensis var. sinensis
DCAR_009819 Daucus carota
DCAR_013326 Daucus carota
DCAR_023044 Daucus carota
Dinv15661 Davidia involucrata
Duzib138G1023 Durio zibethinus
ECA233G2088 Erigeron canadensis
EL10Ac9g22841 Beta vulgaris
Eucgr.A02029 Eucalyptus grandis
Eucgr.K01238 Eucalyptus grandis
FAN02G1383 Fragaria x ananassa
FAN05G1089 Fragaria x ananassa
FAN09G3830 Fragaria x ananassa
FAN14G2842 Fragaria x ananassa
FvH4_1g09701 Fragaria vesca
FvH4_6g38770 Fragaria vesca
Glyma.02G283700 Glycine max
Glyma.08G303300 Glycine max
Glyma.08G303400 Glycine max
Glyma.08G306600 Glycine max
Glyma.14G030800 Glycine max
Glyma.18G111600 Glycine max
Gohir.1Z049461 Gossypium hirsutum
Gohir.A07G182600 Gossypium hirsutum
Gohir.D07G189401 Gossypium hirsutum
Gorai.001G211000 Gossypium raimondii
GSVIVG01020830001 Vitis vinifera
HanXRQChr12g0366281 Helianthus annuus
HanXRQChr13g0387591 Helianthus annuus
HanXRQChr17g0541161 Helianthus annuus
Haze_13578 Corylus avellana
Hma1.2p1_0734F.1_g210390 Hydrangea macrophylla
Hma1.2p1_2465F.1_g322630 Hydrangea macrophylla
HPP92_011659 Vanilla planifolia
HPP92_011705 Vanilla planifolia
HPP92_013544 Vanilla planifolia
HPP92_013590 Vanilla planifolia
Hund08247 Selenicereus undatus
Lalb_Chr04g0248951 Lupinus albus
Lalb_Chr15g0081031 Lupinus albus
Lj1A588T24 Lonicera japonica
Lj6g0022221 Lotus japonicus
Lj8A97T49 Lonicera japonica
LjContig00049g0008406 Lotus japonicus
Lsat_1_v5_gn_3_35120 Lactuca sativa
Lsat_1_v5_gn_8_33181 Lactuca sativa
Manes.01G131000 Manihot esculenta
Manes.02G089300 Manihot esculenta
Mapoly0092s0048 Marchantia polymorpha
MBI01_g06560_MAGBIO Magnolia biondii
MBI18_g37404_MAGBIO Magnolia biondii
MD00G1163200 Malus domestica
MD00G1163300 Malus domestica
MD09G1146900 Malus domestica
MD17G1133500 Malus domestica
Medtr3g450760 Medicago truncatula
Medtr5g090900 Medicago truncatula
MELO3C016184.2 Cucumis melo
Migut.H01275 Erythranthe guttata
Migut.M00075 Erythranthe guttata
MSTRG.14102 Avicennia marina
MSTRG.14900 Avicennia marina
Nitab4.5_0001229g0020 Nicotiana tabacum
Nitab4.5_0001552g0070 Nicotiana tabacum
Nitab4.5_0003208g0060 Nicotiana tabacum
Nitab4.5_0008720g0010 Nicotiana tabacum
Nn7g38011 Nelumbo nucifera
Oeu036989.1 Olea europaea
Oeu056851.1 Olea europaea
Os02g0168300 Oryza sativa ssp. japonica
Os03g0777100 Oryza sativa ssp. japonica
Os06g0670100 Oryza sativa ssp. japonica
Peaxi162Scf00047g00225 Petunia axillaris
Peaxi162Scf00359g00096 Petunia axillaris
PGR042G3279 Punica granatum
PGSC0003DMG400000929 Solanum tuberosum
PGSC0003DMG400028816 Solanum tuberosum
Phvul.006G023700 Phaseolus vulgaris
Phvul.008G195700 Phaseolus vulgaris
Phvul.009G106000 Phaseolus vulgaris
Potri.002G057000 Populus trichocarpa
Potri.005G205700 Populus trichocarpa
Pp3c18_8070 Physcomitrium patens
Pp3c19_15190 Physcomitrium patens
Pp3c21_3970 Physcomitrium patens
Pp3c22_10510 Physcomitrium patens
Prupe.3G178400 Prunus persica
Psat2g017400 Pisum sativum
Psat5g198200 Pisum sativum
PSO675G1700 Papaver somniferum
PSO675G1711 Papaver somniferum
QL08p045144 Quercus lobata
RcHm_v2.0_Chr2g0152321 Rosa chinensis
Rhsim05G0166800 Rhododendron simsii
Sabra02G0046300 Salix brachista
Sabra05G0156300 Salix brachista
SalBow7G3844 Salvia bowleyana
Sc06g0009760 Simmondsia chinensis
Sed0014508 Sechium edule
Sed0023993 Sechium edule
SEGI_31357 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39715 Striga asiatica
SGA_v2.0_scaffold49G18391 Striga asiatica
SGA_v2.0_scaffold73G24475 Striga asiatica
SMO011G0042 Selaginella moellendorffii
SMO329G0008 Selaginella moellendorffii
SMO358G0260 Selaginella moellendorffii
Solyc07g045010.3 Solanum lycopersicum
Solyc12g006270.2 Solanum lycopersicum
Sopen07g023570 Solanum pennellii
Sopen12g002220 Solanum pennellii
Sp1g05380 Schrenkiella parvula
Sp4g13300 Schrenkiella parvula
TAR626G1483 Trochodendron aralioides
THA.LOC104800816 Tarenaya hassleriana
THA.LOC104826243 Tarenaya hassleriana
Thecc.01G167800 Theobroma cacao
Thhalv10007468m.g Eutrema salsugineum
Thhalv10017740m.g Eutrema salsugineum
TPR.G25285 Trifolium pratense
TPR.G26007 Trifolium pratense
TWI14G0046 Tripterygium wilfordii
TWI23G0104 Tripterygium wilfordii
TWI59G1422 Tripterygium wilfordii
vmacro19571 Vaccinium macrocarpon
VMungo0540G1164 Vigna mungo
VMungo0647G1540 Vigna mungo
Zm00001eb059360 Zea mays
Zm00001eb109200 Zea mays
Zm00001eb207380 Zea mays
Zm00001eb213700 Zea mays
Zm00001eb273310 Zea mays
Zm00001eb274250 Zea mays

User provided reference genes

Program Settings