Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p04610 Brassica napus
A06p21950 Brassica napus
Aa31LG2G950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2960 Anthoceros agrestis
Actinidia01994 Actinidia chinensis
Actinidia14574 Actinidia chinensis
Ah.02g110410 Amaranthus hybridus
Ah.12g051740 Amaranthus hybridus
Ah.12g051750 Amaranthus hybridus
AL2G11370 Arabidopsis lyrata
Aqoxy5G04015 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1Z7M3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5U7DNF Arachis hypogaea
AT1G63770 Arabidopsis thaliana
ATR0680G039 Amborella trichopoda
Atru.chr9.2165 Acer truncatum
AUR62010702 Chenopodium quinoa
AUR62017183 Chenopodium quinoa
BcaB07g31551 Brassica carinata
BcaC02g10366 Brassica carinata
BcaC06g36754 Brassica carinata
BcaC08g43016 Brassica carinata
BolC4t24494H Brassica oleracea
BolC6t35397H Brassica oleracea
BolC7t40479H Brassica oleracea
BolC7t40481H Brassica oleracea
BraA06t23665Z Brassica rapa
BraA06t25281Z Brassica rapa
BraA06t25282Z Brassica rapa
C04p29680 Brassica napus
C06p02710 Brassica napus
C07p00300 Brassica napus
C07p00320 Brassica napus
CAN.G774.61 Capsicum annuum
CAN.G774.62 Capsicum annuum
CANSAT35G0036 Cannabis sativa
CARHR047420 Cardamine hirsuta
Carub.0002s0107 Capsella rubella
Ca_17516_v3 Cicer arietinum L.
CBR_g30015 Chara braunii
CBR_g30016 Chara braunii
CBR_g951 Chara braunii
Cc00_g15000 Coffea canephora
Cc00_g15010 Coffea canephora
Cc00_g15020 Coffea canephora
Cc00_g22840 Coffea canephora
Cc02_g32970 Coffea canephora
Cc02_g32980 Coffea canephora
Cc02_g32990 Coffea canephora
Cc08_g14910 Coffea canephora
Cc08_g14920 Coffea canephora
CDE05G0892 Ceratophyllum demersum
CDE08G0568 Ceratophyllum demersum
CDE08G0631 Ceratophyllum demersum
CDE08G1495 Ceratophyllum demersum
Ciclev10018808m.g Citrus clementina
CiPaw.11G133300 Carya illinoinensis
CiPaw.11G133400 Carya illinoinensis
ClCG01G002580 Citrullus lanatus
COL.COLO4_00113 Corchorus olitorius
Cpa.g.sc214.14 Carica papaya
Cre04.g213250 Chlamydomonas reinhardtii
Cre04.g213251 Chlamydomonas reinhardtii
Cre17.g736650 Chlamydomonas reinhardtii
CsaV3_5G002680 Cucumis sativus L.
CsaV3_5G002690 Cucumis sativus L.
CSS0019820 Camellia sinensis var. sinensis
CSS0029032 Camellia sinensis var. sinensis
CSS0047123 Camellia sinensis var. sinensis
DCAR_008371 Daucus carota
DCAR_008372 Daucus carota
DCAR_008373 Daucus carota
Dinv37625 Davidia involucrata
Dinv38927 Davidia involucrata
Duzib084G1173 Durio zibethinus
Duzib205G1189 Durio zibethinus
ECA240G1820 Erigeron canadensis
EL10Ac5g12795 Beta vulgaris
EL10Ac9g20777 Beta vulgaris
Eucgr.D01833 Eucalyptus grandis
FAN04G2168 Fragaria x ananassa
FAN08G0767 Fragaria x ananassa
FAN13G0605 Fragaria x ananassa
FAN18G0212 Fragaria x ananassa
FvH4_5g02730 Fragaria vesca
Glyma.05G209200 Glycine max
Glyma.08G015900 Glycine max
Gohir.A03G018700 Gossypium hirsutum
Gohir.A03G018800 Gossypium hirsutum
Gohir.A08G183600 Gossypium hirsutum
Gohir.D03G150100 Gossypium hirsutum
Gohir.D03G150200 Gossypium hirsutum
Gohir.D08G202250 Gossypium hirsutum
Gorai.003G157400 Gossypium raimondii
Gorai.004G213400 Gossypium raimondii
GSVIVG01013301001 Vitis vinifera
GSVIVG01019730001 Vitis vinifera
GSVIVG01019731001 Vitis vinifera
HanXRQChr03g0086871 Helianthus annuus
HanXRQChr03g0086881 Helianthus annuus
HanXRQChr07g0190431 Helianthus annuus
HanXRQChr13g0416311 Helianthus annuus
HanXRQChr15g0485221 Helianthus annuus
Haze_08801 Corylus avellana
HPP92_025967 Vanilla planifolia
Hund14825 Selenicereus undatus
Lalb_Chr05g0222791 Lupinus albus
Lalb_Chr05g0222801 Lupinus albus
Lalb_Chr05g0224651 Lupinus albus
Lalb_Chr05g0224661 Lupinus albus
Lalb_Chr05g0224671 Lupinus albus
Lalb_Chr09g0332971 Lupinus albus
Lalb_Chr09g0332981 Lupinus albus
Lalb_Chr16g0390071 Lupinus albus
Lalb_Chr16g0390081 Lupinus albus
Lalb_Chr16g0390091 Lupinus albus
Lj4g0006056 Lotus japonicus
Lj8A219G33 Lonicera japonica
Lsat_1_v5_gn_2_26081 Lactuca sativa
Lsat_1_v5_gn_6_86400 Lactuca sativa
Lsat_1_v5_gn_6_86420 Lactuca sativa
Manes.02G020950 Manihot esculenta
Mapoly0042s0035 Marchantia polymorpha
MBI17_g33329_MAGBIO Magnolia biondii
MBI17_g33330_MAGBIO Magnolia biondii
MBI17_g33793_MAGBIO Magnolia biondii
MBI17_g42619_MAGBIO Magnolia biondii
MBI18_g02832_MAGBIO Magnolia biondii
MCO13G113 Micromonas commoda
MCO16G652 Micromonas commoda
MD06G1086400 Malus domestica
MD14G1107600 Malus domestica
Medtr8g098525 Medicago truncatula
Medtr8g098535 Medicago truncatula
Medtr8g098545 Medicago truncatula
MELO3C005688.2 Cucumis melo
Migut.A00742 Erythranthe guttata
Migut.E01080 Erythranthe guttata
MSTRG.1858 Avicennia marina
Nitab4.5_0001615g0030 Nicotiana tabacum
Nitab4.5_0002975g0050 Nicotiana tabacum
Nn1g01570 Nelumbo nucifera
Nn6g33377 Nelumbo nucifera
Oeu011040.2 Olea europaea
Oeu042332.3 Olea europaea
Os08g0562700 Oryza sativa ssp. japonica
Peaxi162Scf00119g00138 Petunia axillaris
PGR031G0275 Punica granatum
PGSC0003DMG400012199 Solanum tuberosum
Phvul.002G290904 Phaseolus vulgaris
Phvul.002G290908 Phaseolus vulgaris
Potri.001G101975 Populus trichocarpa
Potri.001G102051 Populus trichocarpa
Potri.001G102126 Populus trichocarpa
Potri.003G129500 Populus trichocarpa
Pp3c15_1150 Physcomitrium patens
Pp3c26_1330 Physcomitrium patens
Pp3c9_1240 Physcomitrium patens
PRCOL_00005594 Prasinoderma coloniale
Prupe.5G103000 Prunus persica
Prupe.5G103100 Prunus persica
Psat7g031800 Pisum sativum
PSO063G5587 Papaver somniferum
PSO149G0001 Papaver somniferum
PSO210G5645 Papaver somniferum
PSO210G5648 Papaver somniferum
PSO832G0897 Papaver somniferum
QL12p032548 Quercus lobata
RcHm_v2.0_Chr7g0197201 Rosa chinensis
Rhsim02G0233100 Rhododendron simsii
Rhsim07G0057800 Rhododendron simsii
RhsimUnG0058500 Rhododendron simsii
RhsimUnG0160000 Rhododendron simsii
Sabra01G0077100 Salix brachista
Sabra01G0077200 Salix brachista
SalBow1G0073 Salvia bowleyana
SalBow1G5596 Salvia bowleyana
Sc01g0005530 Simmondsia chinensis
Sc01g0005540 Simmondsia chinensis
Sc01g0009690 Simmondsia chinensis
Sed0003481 Sechium edule
Sed0014492 Sechium edule
SGA_v2.0_scaffold173G39167 Striga asiatica
SHI07163 Sapria himalayana
SMO119G0190 Selaginella moellendorffii
SMO119G0209 Selaginella moellendorffii
SMO119G0357 Selaginella moellendorffii
SMO169G0195 Selaginella moellendorffii
SMO351G0363 Selaginella moellendorffii
SMO351G0618 Selaginella moellendorffii
Solyc08g081250.4 Solanum lycopersicum
Sopen08g029560 Solanum pennellii
Sp2g00910 Schrenkiella parvula
TAR629G1189 Trochodendron aralioides
TAR636G0433 Trochodendron aralioides
THA.LOC104809378 Tarenaya hassleriana
THA.LOC104815066 Tarenaya hassleriana
THA.LOC104817937 Tarenaya hassleriana
Thecc.03G281500 Theobroma cacao
Thhalv10023233m.g Eutrema salsugineum
TPR.G10990 Trifolium pratense
TPR.G12767 Trifolium pratense
TPR.G28250 Trifolium pratense
TWI60G0271 Tripterygium wilfordii
TWI81G0748 Tripterygium wilfordii
unitig_61.g26270 Utricularia gibba
vmacro11386 Vaccinium macrocarpon
VMungo0251G1424 Vigna mungo
Zm00001eb038870 Zea mays
Zm00001eb070300 Zea mays
Zm00001eb326750 Zea mays

User provided reference genes

Program Settings