Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44830 Brassica napus
Aa31sc200G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3413 Anthoceros agrestis
Actinidia14047 Actinidia chinensis
Actinidia21927 Actinidia chinensis
Ah.04g160920 Amaranthus hybridus
Ah.14g079060 Amaranthus hybridus
AL3G44850 Arabidopsis lyrata
Aqoxy1G01020 Aquilegia oxysepala
Aqoxy2G01983 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26KJHP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7FS8F8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HMEG3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J75SAY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YHH5WM Arachis hypogaea
AT2G11890 Arabidopsis thaliana
ATR0767G135 Amborella trichopoda
Atru.chr1.2859 Acer truncatum
Atru.chr7.2008 Acer truncatum
AUR62011220 Chenopodium quinoa
AUR62020013 Chenopodium quinoa
BcaB08g34520 Brassica carinata
BcaC01g03134 Brassica carinata
BolC3t17852H Brassica oleracea
BraA03t13620Z Brassica rapa
C03p55720 Brassica napus
CAN.G1490.17 Capsicum annuum
CAN.G206.67 Capsicum annuum
CAN.G467.5 Capsicum annuum
CAN.G467.6 Capsicum annuum
CARHR105000 Cardamine hirsuta
Carub.0003s2773 Capsella rubella
Ca_21639_v3 Cicer arietinum L.
CBR_g17084 Chara braunii
Cc04_g04630 Coffea canephora
Cc06_g07700 Coffea canephora
CDE03G0335 Ceratophyllum demersum
CDE06G2050 Ceratophyllum demersum
Cfa002267 Carpinus fangiana
Cfa002271 Carpinus fangiana
Cfa020708 Carpinus fangiana
Ciclev10009554m.g Citrus clementina
Ciclev10026249m.g Citrus clementina
CiPaw.02G158400 Carya illinoinensis
CiPaw.04G177300 Carya illinoinensis
ClCG07G012270 Citrullus lanatus
ClCG11G003480 Citrullus lanatus
COL.COLO4_07789 Corchorus olitorius
COL.COLO4_11859 Corchorus olitorius
Cpa.g.sc10.145 Carica papaya
Cpa.g.sc277.1 Carica papaya
Cpa.g.sc46.62 Carica papaya
Cre16.g662200 Chlamydomonas reinhardtii
CsaV3_2G003350 Cucumis sativus L.
CsaV3_4G001880 Cucumis sativus L.
CSS0004906 Camellia sinensis var. sinensis
CSS0024693 Camellia sinensis var. sinensis
CSS0048070 Camellia sinensis var. sinensis
DCAR_025526 Daucus carota
Dinv36451 Davidia involucrata
Dinv41448 Davidia involucrata
Duzib187G0063 Durio zibethinus
ECA240G3048 Erigeron canadensis
ECA246G4796 Erigeron canadensis
EL10Ac8g18759 Beta vulgaris
Eucgr.C00486 Eucalyptus grandis
Eucgr.J03086 Eucalyptus grandis
Eucgr.L03509 Eucalyptus grandis
FAN01G1371 Fragaria x ananassa
FAN02G2913 Fragaria x ananassa
FAN03G3335 Fragaria x ananassa
FAN05G1248 Fragaria x ananassa
FAN06G3482 Fragaria x ananassa
FAN10G1765 Fragaria x ananassa
FAN14G0577 Fragaria x ananassa
FvH4_6g29260 Fragaria vesca
FvH4_7g01830 Fragaria vesca
Glyma.13G163200 Glycine max
Glyma.17G107700 Glycine max
Glyma.18G285400 Glycine max
Gohir.A06G052100 Gossypium hirsutum
Gohir.A06G184000 Gossypium hirsutum
Gohir.D06G051100 Gossypium hirsutum
Gohir.D06G191000 Gossypium hirsutum
Gorai.010G059300 Gossypium raimondii
Gorai.010G224100 Gossypium raimondii
GSVIVG01012853001 Vitis vinifera
GSVIVG01017455001 Vitis vinifera
HanXRQChr09g0242651 Helianthus annuus
HanXRQChr12g0384591 Helianthus annuus
Haze_16594 Corylus avellana
Haze_25451 Corylus avellana
Hma1.2p1_0182F.1_g080220 Hydrangea macrophylla
Hund01535 Selenicereus undatus
Lalb_Chr12g0198381 Lupinus albus
Lj4g0026790 Lotus japonicus
Lj7P438T32 Lonicera japonica
Lj9P497T63 Lonicera japonica
Lsat_1_v5_gn_5_8881 Lactuca sativa
Lsat_1_v5_gn_7_45881 Lactuca sativa
Manes.04G109100 Manihot esculenta
Manes.06G044501 Manihot esculenta
Manes.14G119000 Manihot esculenta
Mapoly0145s0021 Marchantia polymorpha
MBI14_g43134_MAGBIO Magnolia biondii
MD02G1018700 Malus domestica
MD04G1160400 Malus domestica
MD15G1162700 Malus domestica
MD17G1216500 Malus domestica
Medtr0182s0050 Medicago truncatula
Medtr1g115240 Medicago truncatula
Medtr4g116130 Medicago truncatula
Medtr4g116140 Medicago truncatula
MELO3C004481.2 Cucumis melo
MELO3C017846.2 Cucumis melo
Migut.D01086 Erythranthe guttata
Migut.I00302 Erythranthe guttata
Migut.J01245 Erythranthe guttata
MSTRG.6073 Avicennia marina
MSTRG.9418 Avicennia marina
Nitab4.5_0000142g0500 Nicotiana tabacum
Nitab4.5_0000373g0180 Nicotiana tabacum
Nitab4.5_0000704g0130 Nicotiana tabacum
Nitab4.5_0006185g0070 Nicotiana tabacum
Nitab4.5_0007621g0030 Nicotiana tabacum
Nn2g12183 Nelumbo nucifera
Nn8g39641 Nelumbo nucifera
Oeu000532.1 Olea europaea
Oeu018797.1 Olea europaea
Oeu051711.1 Olea europaea
Oeu055937.1 Olea europaea
Os01g0530341 Oryza sativa ssp. japonica
Os01g0854651 Oryza sativa ssp. japonica
Os08g0299200 Oryza sativa ssp. japonica
PGR031G1444 Punica granatum
PGR102G2301 Punica granatum
PGSC0003DMG401028528 Solanum tuberosum
Phvul.003G172100 Phaseolus vulgaris
Phvul.008G016200 Phaseolus vulgaris
Potri.003G198200 Populus trichocarpa
Potri.006G062000 Populus trichocarpa
Potri.018G121300 Populus trichocarpa
Potri.T125606 Populus trichocarpa
Pp3c10_25820 Physcomitrium patens
Pp3c20_23450 Physcomitrium patens
Prupe.3G092500 Prunus persica
Prupe.7G252100 Prunus persica
Psat1g004240 Pisum sativum
Psat1g105080 Pisum sativum
Psat1g105120 Pisum sativum
Psat4g035080 Pisum sativum
Psat4g190400 Pisum sativum
Psat4g221560 Pisum sativum
PSO017G5725 Papaver somniferum
PSO170G4195 Papaver somniferum
QL02p090697 Quercus lobata
QL05p032502 Quercus lobata
QL05p033572 Quercus lobata
QL05p033586 Quercus lobata
RcHm_v2.0_Chr2g0087111 Rosa chinensis
RcHm_v2.0_Chr2g0134431 Rosa chinensis
RcHm_v2.0_Chr7g0219721 Rosa chinensis
Rhsim01G0054900 Rhododendron simsii
Rhsim08G0210300 Rhododendron simsii
Sabra03G0147600 Salix brachista
Sabra06G0044600 Salix brachista
Sabra18G0100000 Salix brachista
Sabra18G0101800 Salix brachista
SalBow6G6201 Salvia bowleyana
SalBow6G6717 Salvia bowleyana
SalBow7G0139 Salvia bowleyana
SalBow7G1699 Salvia bowleyana
Sc08g0006060 Simmondsia chinensis
Sc12g0008820 Simmondsia chinensis
Sed0010340 Sechium edule
Sed0018089 Sechium edule
SEGI_03219 Sequoiadendron giganteum
SGA_v2.0_scaffold117G32338 Striga asiatica
SGA_v2.0_scaffold21G09608 Striga asiatica
SGA_v2.0_scaffold339G49252 Striga asiatica
SHI03214 Sapria himalayana
SMO172G0026 Selaginella moellendorffii
Solyc06g068290.1 Solanum lycopersicum
Solyc07g007510.4 Solanum lycopersicum
Sopen06g025560 Solanum pennellii
SpUN0284_0010 Schrenkiella parvula
TAR383G1048 Trochodendron aralioides
TAR626G1384 Trochodendron aralioides
TAR673G0001 Trochodendron aralioides
THA.LOC104808954 Tarenaya hassleriana
Thecc.06G032400 Theobroma cacao
Thecc.09G137100 Theobroma cacao
Thhalv10002332m.g Eutrema salsugineum
TPR.G7983 Trifolium pratense
TPR.G7999 Trifolium pratense
TWI34G0275 Tripterygium wilfordii
TWI75G1296 Tripterygium wilfordii
unitig_0.g538 Utricularia gibba
unitig_62.g23778 Utricularia gibba
vmacro07750 Vaccinium macrocarpon
vmacro07751 Vaccinium macrocarpon
vmacro19023 Vaccinium macrocarpon
VMungo0331G1258 Vigna mungo
VMungo0464G1740 Vigna mungo
VMungo0464G2012 Vigna mungo
VMungo1080G0341 Vigna mungo
VMungo1127G2121 Vigna mungo
VMungo1215G2750 Vigna mungo
VMungo1215G2950 Vigna mungo
VMungo1383G2173 Vigna mungo
Zm00001eb225080 Zea mays

User provided reference genes

Program Settings