Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p28720 Brassica napus
A01p28730 Brassica napus
A03p31370 Brassica napus
A03p31390 Brassica napus
A03p31940 Brassica napus
A03p66180 Brassica napus
A08p11060 Brassica napus
A09p01380 Brassica napus
Aa31LG5G790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.216 Anthoceros agrestis
Actinidia10086 Actinidia chinensis
AL1G66340 Arabidopsis lyrata
AL1G66400 Arabidopsis lyrata
AL6G51520 Arabidopsis lyrata
AL6G51550 Arabidopsis lyrata
AL6G51580 Arabidopsis lyrata
AL6G52160 Arabidopsis lyrata
Aqoxy3G00722 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AA9XFA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3X9WH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3CQ76 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YLJW1T Arachis hypogaea
AT1G56550 Arabidopsis thaliana
AT4G01220 Arabidopsis thaliana
AT4G01750 Arabidopsis thaliana
AT4G01770 Arabidopsis thaliana
ATR1127G059 Amborella trichopoda
Atru.chr1.469 Acer truncatum
Atru.chr3.1617 Acer truncatum
Atru.chr4.1400 Acer truncatum
Atru.chr4.1409 Acer truncatum
Atru.chr5.604 Acer truncatum
AUR62004427 Chenopodium quinoa
AUR62022632 Chenopodium quinoa
BcaB01g02101 Brassica carinata
BcaB01g02325 Brassica carinata
BcaB01g02394 Brassica carinata
BcaB01g02399 Brassica carinata
BcaB01g02400 Brassica carinata
BcaB04g18209 Brassica carinata
BcaB04g20219 Brassica carinata
BcaB04g20220 Brassica carinata
BcaC01g06790 Brassica carinata
BcaC01g06791 Brassica carinata
BcaC01g06852 Brassica carinata
BcaC02g10646 Brassica carinata
BcaC04g24064 Brassica carinata
BcaC04g24133 Brassica carinata
BcaC06g31790 Brassica carinata
BcaC07g37810 Brassica carinata
BcaNung06369 Brassica carinata
BcaNung06370 Brassica carinata
BcaNung06371 Brassica carinata
BolC1t03595H Brassica oleracea
BolC1t03596H Brassica oleracea
BolC3t16109H Brassica oleracea
BolC3t16111H Brassica oleracea
BolC3t16168H Brassica oleracea
BolC4t24187H Brassica oleracea
BolC8t48199H Brassica oleracea
BolC9t53009H Brassica oleracea
BolC9t53082H Brassica oleracea
BraA01t03030Z Brassica rapa
BraA01t03031Z Brassica rapa
BraA03t12317Z Brassica rapa
BraA03t12320Z Brassica rapa
BraA03t12366Z Brassica rapa
BraA03t15670Z Brassica rapa
BraA08t33098Z Brassica rapa
BraA09t35802Z Brassica rapa
C01p36370 Brassica napus
C01p36380 Brassica napus
C03p38280 Brassica napus
C03p38300 Brassica napus
C03p38960 Brassica napus
C04p26170 Brassica napus
C09p00750 Brassica napus
C09p01480 Brassica napus
CAN.G78.142 Capsicum annuum
CANSAT56G0435 Cannabis sativa
CARHR249080 Cardamine hirsuta
CARHR249890 Cardamine hirsuta
CARHR249940 Cardamine hirsuta
Carub.0002s0746 Capsella rubella
Carub.0006s3545 Capsella rubella
Carub.0006s3626 Capsella rubella
Ca_18235_v3 Cicer arietinum L.
CBR_g20042 Chara braunii
CBR_g22362 Chara braunii
CBR_g37491 Chara braunii
CBR_g48626 Chara braunii
CBR_g52600 Chara braunii
CBR_g54219 Chara braunii
Cc02_g38750 Coffea canephora
CDE03G0330 Ceratophyllum demersum
CDE03G0450 Ceratophyllum demersum
CDE04G0051 Ceratophyllum demersum
Ciclev10020808m.g Citrus clementina
CiPaw.01G069500 Carya illinoinensis
CiPaw.02G037100 Carya illinoinensis
ClCG06G003330 Citrullus lanatus
COL.COLO4_06364 Corchorus olitorius
Cpa.g.sc184.13 Carica papaya
CsaV3_6G000950 Cucumis sativus L.
CSS0026017 Camellia sinensis var. sinensis
CSS0034848 Camellia sinensis var. sinensis
DCAR_025233 Daucus carota
Dinv43878 Davidia involucrata
Duzib133G0604 Durio zibethinus
Duzib138G0843 Durio zibethinus
ECA236G3657 Erigeron canadensis
EL10Ac1g00337 Beta vulgaris
Eucgr.E00084 Eucalyptus grandis
FAN08G1910 Fragaria x ananassa
FAN13G0201 Fragaria x ananassa
FAN18G0584 Fragaria x ananassa
FvH4_5g17520 Fragaria vesca
Glyma.08G088500 Glycine max
Gohir.A08G127033 Gossypium hirsutum
Gohir.A08G127100 Gossypium hirsutum
Gohir.A11G093250 Gossypium hirsutum
Gohir.D08G148500 Gossypium hirsutum
Gorai.004G154200 Gossypium raimondii
Gorai.007G104400 Gossypium raimondii
GSVIVG01016220001 Vitis vinifera
GSVIVG01027019001 Vitis vinifera
HanXRQChr04g0120881 Helianthus annuus
Haze_15587 Corylus avellana
Haze_15593 Corylus avellana
Hma1.2p1_0322F.1_g125030 Hydrangea macrophylla
Hund16681 Selenicereus undatus
Hund27235 Selenicereus undatus
Lalb_Chr07g0188261 Lupinus albus
Lalb_Chr12g0209121 Lupinus albus
Lalb_Chr12g0209131 Lupinus albus
Lalb_Chr13g0293481 Lupinus albus
Lj4g0022863 Lotus japonicus
Lj9A594G57 Lonicera japonica
Lsat_1_v5_gn_7_2560 Lactuca sativa
Manes.01G251100 Manihot esculenta
Manes.04G035034 Manihot esculenta
Manes.05G027900 Manihot esculenta
MBI06_g38100_MAGBIO Magnolia biondii
MBI07_g26935_MAGBIO Magnolia biondii
MD01G1073300 Malus domestica
MD07G1129400 Malus domestica
MD07G1129500 Malus domestica
Medtr4g094738 Medicago truncatula
MELO3C021174.2 Cucumis melo
Migut.N01577 Erythranthe guttata
MSTRG.4827 Avicennia marina
Nitab4.5_0000305g0370 Nicotiana tabacum
Nitab4.5_0004748g0050 Nicotiana tabacum
Nn7g37326 Nelumbo nucifera
Oeu004916.1 Olea europaea
Oeu010637.2 Olea europaea
Os05g0386900 Oryza sativa ssp. japonica
Peaxi162Scf01254g00024 Petunia axillaris
PGR031G1043 Punica granatum
PGSC0003DMG400000077 Solanum tuberosum
Phvul.002G188500 Phaseolus vulgaris
Potri.002G166000 Populus trichocarpa
Potri.014G092400 Populus trichocarpa
Pp3c18_10930 Physcomitrium patens
Prupe.2G179700 Prunus persica
Psat7g088200 Pisum sativum
PSO135G0627 Papaver somniferum
PSO384G2082 Papaver somniferum
PSO541G4802 Papaver somniferum
PSO675G4679 Papaver somniferum
QL06p037830 Quercus lobata
RcHm_v2.0_Chr7g0178141 Rosa chinensis
Rhsim10G0140800 Rhododendron simsii
Sabra02G0145600 Salix brachista
SalBow5G3651 Salvia bowleyana
Sc01g0003120 Simmondsia chinensis
Sed0007611 Sechium edule
Sed0019683 Sechium edule
SEGI_29403 Sequoiadendron giganteum
SEGI_34630 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05701 Striga asiatica
SGA_v2.0_scaffold43G16385 Striga asiatica
SHI13338 Sapria himalayana
SMO340G0074 Selaginella moellendorffii
Solyc01g095290.4 Solanum lycopersicum
Sopen01g039080 Solanum pennellii
Sp2g03670 Schrenkiella parvula
Sp2g03680 Schrenkiella parvula
Sp6g00900 Schrenkiella parvula
Sp6g01780 Schrenkiella parvula
Sp6g01790 Schrenkiella parvula
Sp6g06480 Schrenkiella parvula
TAR374G1459 Trochodendron aralioides
TAR629G0966 Trochodendron aralioides
THA.LOC104801389 Tarenaya hassleriana
Thecc.01G350100 Theobroma cacao
Thhalv10015591m.g Eutrema salsugineum
Thhalv10024021m.g Eutrema salsugineum
Thhalv10024115m.g Eutrema salsugineum
Thhalv10028748m.g Eutrema salsugineum
Thhalv10028872m.g Eutrema salsugineum
Thhalv10029467m.g Eutrema salsugineum
TPR.G23818 Trifolium pratense
TWI14G1168 Tripterygium wilfordii
unitig_21.g20128 Utricularia gibba
unitig_52.g17706 Utricularia gibba
unitig_52.g17708 Utricularia gibba
unitig_744.g24578 Utricularia gibba
unitig_8.g3402 Utricularia gibba
vmacro13215 Vaccinium macrocarpon
VMungo0251G1394 Vigna mungo
Zm00001eb287010 Zea mays

User provided reference genes

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