Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47620 Brassica napus
Aa31LG2G21670 Aethionema arabicum
Aa31LG5G3370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4900 Anthoceros agrestis
Actinidia12276 Actinidia chinensis
Actinidia17447 Actinidia chinensis
Actinidia30111 Actinidia chinensis
Ah.08g213770 Amaranthus hybridus
Ah.15g091560 Amaranthus hybridus
AL7G23810 Arabidopsis lyrata
AL8G16220 Arabidopsis lyrata
Aqoxy5G00087 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5QC4GP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5ZSF1B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B239PN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C1DUQD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8W1EX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E3U1P5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4ZHWF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TFSL1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UB37AI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZCX39R Arachis hypogaea
AT4G28706 Arabidopsis thaliana
AT5G43910 Arabidopsis thaliana
ATR0088G044 Amborella trichopoda
Atru.chr5.1956 Acer truncatum
AUR62008831 Chenopodium quinoa
AUR62008832 Chenopodium quinoa
AUR62025409 Chenopodium quinoa
BcaC06g31670 Brassica carinata
BolC7t43177H Brassica oleracea
BraA06t27630Z Brassica rapa
C03p82370 Brassica napus
C07p26480 Brassica napus
CAN.G1178.12 Capsicum annuum
CAN.G1178.13 Capsicum annuum
CANSAT01G1040 Cannabis sativa
CANSAT01G2940 Cannabis sativa
CARHR179510 Cardamine hirsuta
CARHR179520 Cardamine hirsuta
CARHR236490 Cardamine hirsuta
Carub.0007s1194 Capsella rubella
Carub.0008s0468 Capsella rubella
Ca_08762_v3 Cicer arietinum L.
Ca_09633_v3 Cicer arietinum L.
Ca_30216_v3 Cicer arietinum L.
CBR_g19222 Chara braunii
Cc01_g17560 Coffea canephora
Cc01_g17570 Coffea canephora
Cc01_g17600 Coffea canephora
Cc01_g17610 Coffea canephora
CDE05G0580 Ceratophyllum demersum
CDE05G2850 Ceratophyllum demersum
Cfa002504 Carpinus fangiana
Ciclev10020430m.g Citrus clementina
CiPaw.03G272800 Carya illinoinensis
CiPaw.04G191600 Carya illinoinensis
CiPaw.04G191700 Carya illinoinensis
ClCG07G001530 Citrullus lanatus
ClCG07G001550 Citrullus lanatus
COL.COLO4_24810 Corchorus olitorius
Cpa.g.sc87.66 Carica papaya
Cpa.g.sc87.67 Carica papaya
Cre01.g045640 Chlamydomonas reinhardtii
CsaV3_3G028560 Cucumis sativus L.
CSS0000958 Camellia sinensis var. sinensis
CSS0034606 Camellia sinensis var. sinensis
CSS0038579 Camellia sinensis var. sinensis
CSS0039508 Camellia sinensis var. sinensis
DCAR_004696 Daucus carota
Dinv43046 Davidia involucrata
Duzib138G1039 Durio zibethinus
ECA247G2482 Erigeron canadensis
ECA248G2748 Erigeron canadensis
EL10Ac7g17735 Beta vulgaris
Eucgr.H00836 Eucalyptus grandis
Eucgr.H00837 Eucalyptus grandis
Eucgr.H00838 Eucalyptus grandis
Eucgr.H00844 Eucalyptus grandis
Eucgr.H00845 Eucalyptus grandis
Eucgr.H00846 Eucalyptus grandis
Eucgr.K03579 Eucalyptus grandis
Eucgr.L01052 Eucalyptus grandis
Eucgr.L01053 Eucalyptus grandis
Eucgr.L03567 Eucalyptus grandis
FAN15G1218 Fragaria x ananassa
FAN24G0301 Fragaria x ananassa
FvH4_2g20180 Fragaria vesca
Glyma.03G169300 Glycine max
Glyma.03G169400 Glycine max
Glyma.10G041400 Glycine max
Glyma.10G041500 Glycine max
Glyma.13G128300 Glycine max
Glyma.19G170600 Glycine max
Gohir.A07G203100 Gossypium hirsutum
Gohir.A08G046100 Gossypium hirsutum
Gohir.D07G209300 Gossypium hirsutum
Gohir.D08G056600 Gossypium hirsutum
Gorai.001G236300 Gossypium raimondii
Gorai.004G057700 Gossypium raimondii
GSVIVG01028465001 Vitis vinifera
HanXRQChr01g0014831 Helianthus annuus
HanXRQChr10g0280301 Helianthus annuus
Haze_24728 Corylus avellana
Hma1.2p1_2051F.1_g312650 Hydrangea macrophylla
HPP92_025819 Vanilla planifolia
Hund05507 Selenicereus undatus
Hund05508 Selenicereus undatus
Hund18330 Selenicereus undatus
Lalb_Chr02g0152831 Lupinus albus
Lalb_Chr02g0152861 Lupinus albus
Lalb_Chr02g0152871 Lupinus albus
Lalb_Chr06g0170821 Lupinus albus
Lalb_Chr06g0170851 Lupinus albus
Lalb_Chr25g0289811 Lupinus albus
Lj1g0002088 Lotus japonicus
Lj2C1140G2 Lonicera japonica
Lj2g0008856 Lotus japonicus
Lj5g0003408 Lotus japonicus
Lj5g0007325 Lotus japonicus
Lsat_1_v5_gn_5_180041 Lactuca sativa
Lsat_1_v5_gn_9_11840 Lactuca sativa
Manes.12G039500 Manihot esculenta
Mapoly0004s0194 Marchantia polymorpha
MCO09G811 Micromonas commoda
MD05G1185300 Malus domestica
MD10G1173100 Malus domestica
MD10G1173200 Malus domestica
MD10G1173500 Malus domestica
Medtr1g069320 Medicago truncatula
Medtr1g069325 Medicago truncatula
Medtr7g099270 Medicago truncatula
Medtr7g099280 Medicago truncatula
MELO3C012819.2 Cucumis melo
Migut.D00492 Erythranthe guttata
Migut.N02238 Erythranthe guttata
Nitab4.5_0000385g0120 Nicotiana tabacum
Nitab4.5_0000392g0040 Nicotiana tabacum
Nitab4.5_0001381g0020 Nicotiana tabacum
Nitab4.5_0001590g0020 Nicotiana tabacum
Nitab4.5_0003050g0010 Nicotiana tabacum
Nitab4.5_0007181g0010 Nicotiana tabacum
Nn1g03053 Nelumbo nucifera
Nn1g03058 Nelumbo nucifera
Os08g0566400 Oryza sativa ssp. japonica
Os10g0465900 Oryza sativa ssp. japonica
Peaxi162Scf00043g01711 Petunia axillaris
Peaxi162Scf00214g00026 Petunia axillaris
Peaxi162Scf01083g00112 Petunia axillaris
PGR044G1760 Punica granatum
PGR083G0944 Punica granatum
PGR083G1209 Punica granatum
PGR083G1329 Punica granatum
PGR083G1413 Punica granatum
PGR083G1634 Punica granatum
PGR083G2794 Punica granatum
PGSC0003DMG400004774 Solanum tuberosum
PGSC0003DMG400009744 Solanum tuberosum
PGSC0003DMG401025696 Solanum tuberosum
PGSC0003DMG402025696 Solanum tuberosum
Phvul.001G167800 Phaseolus vulgaris
Phvul.007G154700 Phaseolus vulgaris
Phvul.007G154800 Phaseolus vulgaris
Potri.002G254500 Populus trichocarpa
Pp3c16_16280 Physcomitrium patens
PRCOL_00002073 Prasinoderma coloniale
Prupe.8G212100 Prunus persica
Psat3g050480 Pisum sativum
Psat3g051960 Pisum sativum
Psat4g116800 Pisum sativum
Psat6g063880 Pisum sativum
Psat6g063920 Pisum sativum
PSO063G6030 Papaver somniferum
PSO764G0139 Papaver somniferum
PSO832G0562 Papaver somniferum
QL09p042915 Quercus lobata
RcHm_v2.0_Chr6g0285941 Rosa chinensis
Rhsim01G0259300 Rhododendron simsii
Rhsim06G0095600 Rhododendron simsii
Sc02g0004250 Simmondsia chinensis
Sc17g0002250 Simmondsia chinensis
Sed0003992 Sechium edule
SEGI_15443 Sequoiadendron giganteum
SEGI_17647 Sequoiadendron giganteum
SEGI_31401 Sequoiadendron giganteum
SEGI_36493 Sequoiadendron giganteum
SEGI_37964 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13038 Striga asiatica
Solyc08g078370.4 Solanum lycopersicum
Solyc09g064240.3 Solanum lycopersicum
Sopen08g026860 Solanum pennellii
Sopen09g025450 Solanum pennellii
Sp7g26690 Schrenkiella parvula
TAR365G0417 Trochodendron aralioides
THA.LOC104804033 Tarenaya hassleriana
THA.LOC104826056 Tarenaya hassleriana
Thecc.01G246600 Theobroma cacao
Thhalv10003370m.g Eutrema salsugineum
Thhalv10025355m.g Eutrema salsugineum
TPR.G10853 Trifolium pratense
TPR.G229 Trifolium pratense
TPR.G26517 Trifolium pratense
TPR.G30860 Trifolium pratense
TPR.G30862 Trifolium pratense
TWI12G1380 Tripterygium wilfordii
unitig_26.g9791 Utricularia gibba
vmacro14785 Vaccinium macrocarpon
VMungo0720G1232 Vigna mungo
VMungo0720G1759 Vigna mungo
VMungo1383G0903 Vigna mungo
VMungo1383G3625 Vigna mungo
Zm00001eb034820 Zea mays

User provided reference genes

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