Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14060 Brassica napus
Aa31LG9G1030 Aethionema arabicum
Aa31LG9G1040 Aethionema arabicum
Aa31LG9G750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2899 Anthoceros agrestis
Actinidia34779 Actinidia chinensis
Actinidia38907 Actinidia chinensis
AL7G48530 Arabidopsis lyrata
Aqoxy2G04188 Aquilegia oxysepala
Aqoxy4G00232 Aquilegia oxysepala
Aqoxy6G03074 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7W7N8S Arachis hypogaea
AT5G41020 Arabidopsis thaliana
ATR0751G201 Amborella trichopoda
Atru.chr3.3571 Acer truncatum
Atru.chr3.3572 Acer truncatum
Atru.chr3.3573 Acer truncatum
Atru.chr3.3574 Acer truncatum
Atru.chr3.3575 Acer truncatum
AUR62027593 Chenopodium quinoa
AUR62030249 Chenopodium quinoa
BcaB06g26361 Brassica carinata
BcaB06g27583 Brassica carinata
BcaB06g27584 Brassica carinata
BcaC02g08984 Brassica carinata
BcaC05g28060 Brassica carinata
BcaC09g51256 Brassica carinata
BcaC09g51258 Brassica carinata
BcaNung03841 Brassica carinata
BcaNung03843 Brassica carinata
BolC1t01455H Brassica oleracea
BolC4t26400H Brassica oleracea
BolC5t32818H Brassica oleracea
BraA04t17067Z Brassica rapa
C01p15060 Brassica napus
C04p48090 Brassica napus
C05p40730 Brassica napus
CAN.G3121.3 Capsicum annuum
CAN.G861.12 Capsicum annuum
CAN.G861.14 Capsicum annuum
CANSAT54G0322 Cannabis sativa
CARHR213350 Cardamine hirsuta
Carub.0007s3447 Capsella rubella
Ca_14134_v3 Cicer arietinum L.
Cc11_g08560 Coffea canephora
CDE11G0705 Ceratophyllum demersum
Cfa013261 Carpinus fangiana
Ciclev10014556m.g Citrus clementina
Ciclev10030284m.g Citrus clementina
CiPaw.11G100100 Carya illinoinensis
CiPaw.15G124500 Carya illinoinensis
ClCG05G001940 Citrullus lanatus
COL.COLO4_18286 Corchorus olitorius
Cpa.g.sc65.22 Carica papaya
Cre14.g632176 Chlamydomonas reinhardtii
CsaV3_3G009340 Cucumis sativus L.
CSS0012061 Camellia sinensis var. sinensis
DCAR_004337 Daucus carota
DCAR_008318 Daucus carota
DCAR_024215 Daucus carota
DCAR_024216 Daucus carota
Dinv29349 Davidia involucrata
Duzib168G1098 Durio zibethinus
ECA233G3624 Erigeron canadensis
ECA236G3716 Erigeron canadensis
EL10Ac1g02277 Beta vulgaris
EL10Ac6g13885 Beta vulgaris
EL10As2g23156 Beta vulgaris
Eucgr.H02511 Eucalyptus grandis
Eucgr.H02514 Eucalyptus grandis
FAN11G0613 Fragaria x ananassa
FAN16G3289 Fragaria x ananassa
FAN21G3495 Fragaria x ananassa
FAN25G2249 Fragaria x ananassa
FvH4_3g31460 Fragaria vesca
Glyma.13G128500 Glycine max
Glyma.17G227850 Glycine max
Gohir.A13G231900 Gossypium hirsutum
Gohir.D13G237500 Gossypium hirsutum
Gorai.013G268300 Gossypium raimondii
HanXRQChr10g0309901 Helianthus annuus
HanXRQChr11g0328481 Helianthus annuus
Haze_21721 Corylus avellana
Haze_25499 Corylus avellana
Hma1.2p1_0892F.1_g233410 Hydrangea macrophylla
HPP92_007494 Vanilla planifolia
Hund25131 Selenicereus undatus
Lalb_Chr01g0022221 Lupinus albus
Lj1g0005602 Lotus japonicus
Lj1P198T22 Lonicera japonica
Lj3g0014709 Lotus japonicus
Lj4C665T1 Lonicera japonica
Lj4C675G2 Lonicera japonica
LjContig00081g0004985 Lotus japonicus
Lsat_1_v5_gn_7_104201 Lactuca sativa
Manes.04G016500 Manihot esculenta
Manes.11G149200 Manihot esculenta
Mapoly0057s0043 Marchantia polymorpha
Mapoly0091s0012 Marchantia polymorpha
Mapoly0158s0003 Marchantia polymorpha
MBI05_g27786_MAGBIO Magnolia biondii
MCO03G213 Micromonas commoda
MD04G1037700 Malus domestica
Medtr1g076600 Medicago truncatula
Medtr7g029435 Medicago truncatula
Medtr8g077990 Medicago truncatula
MELO3C006154.2 Cucumis melo
Migut.D01937 Erythranthe guttata
Migut.D01938 Erythranthe guttata
MSTRG.4371 Avicennia marina
Nitab4.5_0000185g0040 Nicotiana tabacum
Nitab4.5_0000185g0060 Nicotiana tabacum
Nitab4.5_0000712g0010 Nicotiana tabacum
Nitab4.5_0000712g0020 Nicotiana tabacum
Nitab4.5_0000712g0040 Nicotiana tabacum
Nitab4.5_0003367g0010 Nicotiana tabacum
Nitab4.5_0004170g0030 Nicotiana tabacum
Nn7g37196 Nelumbo nucifera
Oeu020912.1 Olea europaea
Oeu046322.1 Olea europaea
Oeu050248.1 Olea europaea
Os06g0303700 Oryza sativa ssp. japonica
Peaxi162Scf00029g00131 Petunia axillaris
Peaxi162Scf00102g00105 Petunia axillaris
Peaxi162Scf00102g00926 Petunia axillaris
Peaxi162Scf00102g01054 Petunia axillaris
Peaxi162Scf00102g01055 Petunia axillaris
Peaxi162Scf00102g01056 Petunia axillaris
Peaxi162Scf00102g01057 Petunia axillaris
Peaxi162Scf00102g01058 Petunia axillaris
Peaxi162Scf00413g00068 Petunia axillaris
Peaxi162Scf01390g00030 Petunia axillaris
Peaxi162Scf25743g00012 Petunia axillaris
Peaxi162Scf25743g00022 Petunia axillaris
Peaxi162Scf25743g00024 Petunia axillaris
Peaxi162Scf25743g00025 Petunia axillaris
Peaxi162Scf25743g00028 Petunia axillaris
Peaxi162Scf25743g00029 Petunia axillaris
Peaxi162Scf25743g00030 Petunia axillaris
Peaxi162Scf41047g00002 Petunia axillaris
PGR083G2356 Punica granatum
PGSC0003DMG400011852 Solanum tuberosum
PGSC0003DMG400012469 Solanum tuberosum
PGSC0003DMG400015272 Solanum tuberosum
PGSC0003DMG400015274 Solanum tuberosum
Phvul.007G154900 Phaseolus vulgaris
Potri.003G168900 Populus trichocarpa
Potri.015G095000 Populus trichocarpa
Pp3c4_2120 Physcomitrium patens
PRCOL_00005270 Prasinoderma coloniale
Prupe.6G106700 Prunus persica
Prupe.6G210800 Prunus persica
Psat1g024480 Pisum sativum
Psat4g091440 Pisum sativum
PSO170G2126 Papaver somniferum
PSO210G0114 Papaver somniferum
PSO210G1119 Papaver somniferum
PSO210G1662 Papaver somniferum
PSO210G1979 Papaver somniferum
PSO210G2437 Papaver somniferum
PSO210G2801 Papaver somniferum
PSO210G4537 Papaver somniferum
PSO210G4587 Papaver somniferum
PSO210G4767 Papaver somniferum
PSO210G6382 Papaver somniferum
PSO357G0514 Papaver somniferum
PSO357G0671 Papaver somniferum
PSO675G0459 Papaver somniferum
PSO675G7906 Papaver somniferum
QL05p019413 Quercus lobata
QL09p047318 Quercus lobata
RcHm_v2.0_Chr5g0058161 Rosa chinensis
RcHm_v2.0_Chr7g0222751 Rosa chinensis
RcHm_v2.0_Chr7g0222761 Rosa chinensis
RcHm_v2.0_Chr7g0227601 Rosa chinensis
Rhsim09G0130800 Rhododendron simsii
Sabra03G0123800 Salix brachista
SalBow6G4532 Salvia bowleyana
Sc24g0002070 Simmondsia chinensis
Sed0005911 Sechium edule
Sed0019703 Sechium edule
SEGI_00837 Sequoiadendron giganteum
SEGI_14072 Sequoiadendron giganteum
SEGI_39348 Sequoiadendron giganteum
SEGI_41560 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31828 Striga asiatica
SGA_v2.0_scaffold124G33628 Striga asiatica
SHI08388 Sapria himalayana
SMO200G0149 Selaginella moellendorffii
Solyc03g019800.4 Solanum lycopersicum
Solyc08g007280.2 Solanum lycopersicum
Solyc08g007300.3 Solanum lycopersicum
Solyc08g066190.2 Solanum lycopersicum
Sopen03g029820 Solanum pennellii
Sopen08g003240 Solanum pennellii
Sopen08g019870 Solanum pennellii
Sp7g00890 Schrenkiella parvula
TAR626G0419 Trochodendron aralioides
THA.LOC104815051 Tarenaya hassleriana
THA.LOC104815151 Tarenaya hassleriana
THA.LOC104816721 Tarenaya hassleriana
Thecc.09G346500 Theobroma cacao
Thhalv10027663m.g Eutrema salsugineum
TPR.G12782 Trifolium pratense
TPR.G12921 Trifolium pratense
TPR.G16275 Trifolium pratense
TPR.G20272 Trifolium pratense
TWI18G1003 Tripterygium wilfordii
TWI31G0331 Tripterygium wilfordii
TWI31G0413 Tripterygium wilfordii
unitig_52.g17692 Utricularia gibba
vmacro10400 Vaccinium macrocarpon
Zm00001eb172100 Zea mays

User provided reference genes

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