Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p05360 Brassica napus
A06p01790 Brassica napus
A07p17330 Brassica napus
A07p22130 Brassica napus
Aa31LG1G5360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3888 Anthoceros agrestis
Actinidia21523 Actinidia chinensis
Ah.12g062950 Amaranthus hybridus
AL5G22950 Arabidopsis lyrata
AL5G35520 Arabidopsis lyrata
Aqoxy2G00340 Aquilegia oxysepala
Aqoxy3G03071 Aquilegia oxysepala
Aqoxy4G01641 Aquilegia oxysepala
Aqoxy5G02061 Aquilegia oxysepala
Aqoxy90s003 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.28N5NC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HRMJ8R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVGJ4H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J24RTT Arachis hypogaea
AT3G54470 Arabidopsis thaliana
ATR0789G118 Amborella trichopoda
Atru.chr12.1029 Acer truncatum
Atru.chr12.1386 Acer truncatum
Atru.chr12.1389 Acer truncatum
AUR62001997 Chenopodium quinoa
AUR62003805 Chenopodium quinoa
AUR62003806 Chenopodium quinoa
AUR62026849 Chenopodium quinoa
AUR62037200 Chenopodium quinoa
BcaB01g04040 Brassica carinata
BcaB02g07736 Brassica carinata
BcaB02g08443 Brassica carinata
BcaB05g24115 Brassica carinata
BcaC02g09067 Brassica carinata
BcaC02g12603 Brassica carinata
BcaC03g15881 Brassica carinata
BcaC03g17911 Brassica carinata
BcaC05g27724 Brassica carinata
BcaC07g37637 Brassica carinata
BcaC08g43728 Brassica carinata
BcaC08g44683 Brassica carinata
BolC2t09647H Brassica oleracea
BolC4t25379H Brassica oleracea
BolC5t32459H Brassica oleracea
BolC6t37247H Brassica oleracea
BolC6t37404H Brassica oleracea
BolC8t48010H Brassica oleracea
BolC8t52206H Brassica oleracea
BraA04t16236Z Brassica rapa
BraA07t29896Z Brassica rapa
BraA10t44669Z Brassica rapa
C04p38050 Brassica napus
C05p37050 Brassica napus
C06p22180 Brassica napus
C09p44450 Brassica napus
CAN.G745.39 Capsicum annuum
CAN.G919.25 Capsicum annuum
CANSAT80G2392 Cannabis sativa
CARHR164370 Cardamine hirsuta
Carub.0005s2109 Capsella rubella
Ca_02713_v3 Cicer arietinum L.
Ca_10473_v3 Cicer arietinum L.
Ca_18881_v3 Cicer arietinum L.
Ca_23514_v3 Cicer arietinum L.
Ca_28375_v3 Cicer arietinum L.
Ca_30130_v3 Cicer arietinum L.
CBR_g41363 Chara braunii
Cc02_g26670 Coffea canephora
CDE08G1532 Ceratophyllum demersum
CDE09G0923 Ceratophyllum demersum
Cfa021657 Carpinus fangiana
Ciclev10001014m.g Citrus clementina
Ciclev10004916m.g Citrus clementina
CiPaw.14G006800 Carya illinoinensis
ClCG01G007740 Citrullus lanatus
COL.COLO4_09453 Corchorus olitorius
Cpa.g.sc223.10 Carica papaya
Cpa.g.sc223.9 Carica papaya
Cre01.g048950 Chlamydomonas reinhardtii
CsaV3_5G024820 Cucumis sativus L.
CSS0010475 Camellia sinensis var. sinensis
CSS0011806 Camellia sinensis var. sinensis
DCAR_006596 Daucus carota
Dinv32034 Davidia involucrata
Duzib213G0398 Durio zibethinus
Duzib268G1229 Durio zibethinus
ECA232G0145 Erigeron canadensis
ECA248G3712 Erigeron canadensis
EL10Ac2g02822 Beta vulgaris
Eucgr.G03242 Eucalyptus grandis
FAN01G2682 Fragaria x ananassa
FAN03G0414 Fragaria x ananassa
FAN06G3951 Fragaria x ananassa
FAN10G3499 Fragaria x ananassa
FvH4_7g02810 Fragaria vesca
Glyma.11G154200 Glycine max
Glyma.13G198700 Glycine max
Glyma.15G237000 Glycine max
Glyma.17G012702 Glycine max
Glyma.20G015500 Glycine max
Gohir.A04G028000 Gossypium hirsutum
Gohir.A13G144600 Gossypium hirsutum
Gohir.D05G360100 Gossypium hirsutum
Gohir.D13G149300 Gossypium hirsutum
Gorai.009G432600 Gossypium raimondii
Gorai.013G167000 Gossypium raimondii
GSVIVG01000650001 Vitis vinifera
GSVIVG01000654001 Vitis vinifera
HanXRQChr01g0008251 Helianthus annuus
HanXRQChr13g0406671 Helianthus annuus
Haze_03071 Corylus avellana
Haze_03625 Corylus avellana
Hma1.2p1_0384F.1_g141010 Hydrangea macrophylla
HPP92_003227 Vanilla planifolia
HPP92_003228 Vanilla planifolia
HPP92_003231 Vanilla planifolia
HPP92_003235 Vanilla planifolia
Hund13345 Selenicereus undatus
Hund15723 Selenicereus undatus
Lalb_Chr03g0032831 Lupinus albus
Lalb_Chr04g0264051 Lupinus albus
Lalb_Chr14g0366121 Lupinus albus
Lj3g0002083 Lotus japonicus
Lj3g0024329 Lotus japonicus
Lj7A581T52 Lonicera japonica
Lsat_1_v5_gn_5_157360 Lactuca sativa
Manes.11G004200 Manihot esculenta
Mapoly0052s0107 Marchantia polymorpha
MCO07G762 Micromonas commoda
MD09G1262400 Malus domestica
MD17G1257300 Malus domestica
MD17G1257400 Malus domestica
Medtr1g025060 Medicago truncatula
Medtr3g017580 Medicago truncatula
Medtr8g038390 Medicago truncatula
MELO3C005122.2 Cucumis melo
Migut.B01220 Erythranthe guttata
Migut.N01834 Erythranthe guttata
Migut.O00503 Erythranthe guttata
MSTRG.16992 Avicennia marina
MSTRG.20521 Avicennia marina
Nitab4.5_0000893g0050 Nicotiana tabacum
Nitab4.5_0001135g0170 Nicotiana tabacum
Nn7g36634 Nelumbo nucifera
Oeu002655.1 Olea europaea
Oeu003925.2 Olea europaea
Oeu056551.1 Olea europaea
Os01g0951200 Oryza sativa ssp. japonica
Os01g0951400 Oryza sativa ssp. japonica
Peaxi162Scf00010g03311 Petunia axillaris
Peaxi162Scf01010g00217 Petunia axillaris
PGR031G0586 Punica granatum
PGSC0003DMG400019620 Solanum tuberosum
Phvul.005G029300 Phaseolus vulgaris
Phvul.011G207800 Phaseolus vulgaris
Potri.001G026300 Populus trichocarpa
Potri.003G198501 Populus trichocarpa
Potri.T125906 Populus trichocarpa
Pp3c13_16830 Physcomitrium patens
Pp3c3_16990 Physcomitrium patens
PRCOL_00000883 Prasinoderma coloniale
Prupe.2G032600 Prunus persica
Psat0s1718g0040 Pisum sativum
Psat5g219440 Pisum sativum
PSO339G4798 Papaver somniferum
PSO384G1532 Papaver somniferum
QL04p014524 Quercus lobata
QL04p014886 Quercus lobata
QL04p014894 Quercus lobata
RcHm_v2.0_Chr1g0323241 Rosa chinensis
RcHm_v2.0_Chr4g0435201 Rosa chinensis
RcHm_v2.0_Chr5g0023651 Rosa chinensis
Rhsim01G0123800 Rhododendron simsii
Sabra01G0019400 Salix brachista
Sabra03G0147800 Salix brachista
SalBow5G0323 Salvia bowleyana
SalBow5G1158 Salvia bowleyana
SalBow5G1921 Salvia bowleyana
SalBow5G3827 Salvia bowleyana
SalBow5G4173 Salvia bowleyana
SalBow5G4847 Salvia bowleyana
Sc11g0006540 Simmondsia chinensis
Sed0011268 Sechium edule
Sed0013182 Sechium edule
SEGI_05174 Sequoiadendron giganteum
SEGI_18734 Sequoiadendron giganteum
SEGI_29745 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33627 Striga asiatica
SGA_v2.0_scaffold232G43508 Striga asiatica
SMO181G0021 Selaginella moellendorffii
SMO250G0007 Selaginella moellendorffii
SMO259G0031 Selaginella moellendorffii
Solyc11g068830.2 Solanum lycopersicum
Sopen11g027550 Solanum pennellii
Sp5g07950 Schrenkiella parvula
TAR369G1042 Trochodendron aralioides
THA.LOC104824191 Tarenaya hassleriana
Thecc.07G075400 Theobroma cacao
Thhalv10010334m.g Eutrema salsugineum
TPR.G17794 Trifolium pratense
TPR.G36892 Trifolium pratense
TWI38G0920 Tripterygium wilfordii
unitig_26.g9606 Utricularia gibba
vmacro12692 Vaccinium macrocarpon
VMungo1080G0024 Vigna mungo
VMungo1127G0513 Vigna mungo
VMungo1215G0810 Vigna mungo
VMungo1309G2010 Vigna mungo
Zm00001eb058560 Zea mays
Zm00001eb140930 Zea mays
Zm00001eb140940 Zea mays
Zm00001eb175910 Zea mays
Zm00001eb425780 Zea mays

User provided reference genes

Program Settings