Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43210 Brassica napus
A03p41430 Brassica napus
A05p29210 Brassica napus
Aa31LG1G17670 Aethionema arabicum
Aa31LG8G6720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.823 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.725 Anthoceros agrestis
Actinidia00273 Actinidia chinensis
Actinidia11777 Actinidia chinensis
Actinidia23999 Actinidia chinensis
Ah.01g022260 Amaranthus hybridus
AL3G33480 Arabidopsis lyrata
AL8G41520 Arabidopsis lyrata
Aqoxy2G03569 Aquilegia oxysepala
Aqoxy6G00766 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LSHZ39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RNL651 Arachis hypogaea
AT3G19920 Arabidopsis thaliana
AT5G64230 Arabidopsis thaliana
ATR0618G210 Amborella trichopoda
ATR0782G211 Amborella trichopoda
Atru.chr6.1150 Acer truncatum
AUR62010145 Chenopodium quinoa
AUR62013140 Chenopodium quinoa
AUR62017718 Chenopodium quinoa
AUR62032961 Chenopodium quinoa
BcaB04g19064 Brassica carinata
BcaB06g26061 Brassica carinata
BcaB07g29729 Brassica carinata
BcaC01g03600 Brassica carinata
BcaC03g18250 Brassica carinata
BcaC05g28394 Brassica carinata
BolC2t12392H Brassica oleracea
BolC3t17360H Brassica oleracea
BolC5t33198H Brassica oleracea
BraA02t09241Z Brassica rapa
BraA03t13296Z Brassica rapa
BraA05t21805Z Brassica rapa
C02p63230 Brassica napus
C03p50720 Brassica napus
C05p44710 Brassica napus
CAN.G39.11 Capsicum annuum
CAN.G523.62 Capsicum annuum
CANSAT11G2405 Cannabis sativa
CANSAT78G1325 Cannabis sativa
CARHR095450 Cardamine hirsuta
CARHR278150 Cardamine hirsuta
Carub.0003s1982 Capsella rubella
Carub.0008s2502 Capsella rubella
Ca_00138_v3 Cicer arietinum L.
Cc02_g21430 Coffea canephora
Cc02_g21440 Coffea canephora
CDE04G3736 Ceratophyllum demersum
CDE05G0173 Ceratophyllum demersum
CDE07G0192 Ceratophyllum demersum
CDE10G0983 Ceratophyllum demersum
CDE10G1232 Ceratophyllum demersum
Cfa005639 Carpinus fangiana
Cfa008757 Carpinus fangiana
Ciclev10028678m.g Citrus clementina
Ciclev10033897m.g Citrus clementina
CiPaw.05G170600 Carya illinoinensis
CiPaw.06G153900 Carya illinoinensis
ClCG02G014090 Citrullus lanatus
ClCG10G009290 Citrullus lanatus
COL.COLO4_07841 Corchorus olitorius
Cpa.g.sc42.41 Carica papaya
Cpa.g.sc60.71 Carica papaya
CsaV3_4G009470 Cucumis sativus L.
CsaV3_5G006080 Cucumis sativus L.
CSS0010678 Camellia sinensis var. sinensis
CSS0024199 Camellia sinensis var. sinensis
CSS0040108 Camellia sinensis var. sinensis
CSS0041143 Camellia sinensis var. sinensis
DCAR_001783 Daucus carota
DCAR_002591 Daucus carota
Dinv09027 Davidia involucrata
Dinv11729 Davidia involucrata
Dinv24184 Davidia involucrata
Duzib052G0305 Durio zibethinus
Duzib052G0939 Durio zibethinus
Duzib052G1105 Durio zibethinus
Duzib248G0291 Durio zibethinus
Duzib248G0974 Durio zibethinus
Duzib248G1357 Durio zibethinus
ECA234G4108 Erigeron canadensis
EL10Ac9g21489 Beta vulgaris
EL10Ac9g22971 Beta vulgaris
Eucgr.I02660 Eucalyptus grandis
Eucgr.J00876 Eucalyptus grandis
FAN15G1525 Fragaria x ananassa
FAN20G0359 Fragaria x ananassa
FAN24G2911 Fragaria x ananassa
FvH4_2g10990 Fragaria vesca
FvH4_2g10991 Fragaria vesca
Gohir.A03G165600 Gossypium hirsutum
Gohir.A03G174500 Gossypium hirsutum
Gohir.A04G113900 Gossypium hirsutum
Gohir.A04G114000 Gossypium hirsutum
Gohir.A04G114100 Gossypium hirsutum
Gohir.D02G188800 Gossypium hirsutum
Gohir.D02G197700 Gossypium hirsutum
Gohir.D04G155300 Gossypium hirsutum
Gohir.D04G155400 Gossypium hirsutum
Gohir.D04G155500 Gossypium hirsutum
Gorai.005G211600 Gossypium raimondii
Gorai.005G221000 Gossypium raimondii
Gorai.012G142400 Gossypium raimondii
Gorai.012G142500 Gossypium raimondii
GSVIVG01026180001 Vitis vinifera
GSVIVG01038798001 Vitis vinifera
HanXRQChr16g0514781 Helianthus annuus
Haze_10624 Corylus avellana
Haze_10625 Corylus avellana
Haze_11772 Corylus avellana
Hma1.2p1_0522F.1_g171700 Hydrangea macrophylla
Hma1.2p1_0704F.1_g206600 Hydrangea macrophylla
Hma1.2p1_0933F.1_g238280 Hydrangea macrophylla
Hma1.2p1_0933F.1_g238290 Hydrangea macrophylla
Hma1.2p1_2428F.1_g321980 Hydrangea macrophylla
Hma1.2p1_2428F.1_g321990 Hydrangea macrophylla
HPP92_004284 Vanilla planifolia
Hund00068 Selenicereus undatus
Lalb_Chr05g0217551 Lupinus albus
Lalb_Chr18g0060541 Lupinus albus
Lj3A848T51 Lonicera japonica
Lj5A238G39 Lonicera japonica
Lj6g0009269 Lotus japonicus
Lj6P262T10 Lonicera japonica
Lsat_1_v5_gn_5_107980 Lactuca sativa
Manes.04G066200 Manihot esculenta
Manes.10G105600 Manihot esculenta
Manes.11G102800 Manihot esculenta
Mapoly0081s0028 Marchantia polymorpha
Mapoly0126s0015 Marchantia polymorpha
MBI02_g35751_MAGBIO Magnolia biondii
MBI03_g13820_MAGBIO Magnolia biondii
MD05G1044100 Malus domestica
MD10G1051300 Malus domestica
Medtr2g008960 Medicago truncatula
MELO3C011751.2 Cucumis melo
MELO3C024809.2 Cucumis melo
Migut.B00603 Erythranthe guttata
MSTRG.16588 Avicennia marina
MSTRG.20294 Avicennia marina
Nitab4.5_0000133g0020 Nicotiana tabacum
Nitab4.5_0000863g0230 Nicotiana tabacum
Nitab4.5_0001156g0020 Nicotiana tabacum
Nitab4.5_0001619g0080 Nicotiana tabacum
Nn1g05380 Nelumbo nucifera
Nn2g12615 Nelumbo nucifera
Nn4g22295 Nelumbo nucifera
Nn5g28478 Nelumbo nucifera
Oeu018199.1 Olea europaea
Oeu036918.1 Olea europaea
Os02g0754600 Oryza sativa ssp. japonica
Peaxi162Scf00001g00006 Petunia axillaris
Peaxi162Scf00334g00029 Petunia axillaris
PGR044G1643 Punica granatum
PGR142G0499 Punica granatum
PGR142G4360 Punica granatum
PGSC0003DMG400012580 Solanum tuberosum
PGSC0003DMG400026828 Solanum tuberosum
Potri.007G073600 Populus trichocarpa
Potri.017G053200 Populus trichocarpa
Pp3c17_11300 Physcomitrium patens
Pp3c17_11302 Physcomitrium patens
Pp3c2_10560 Physcomitrium patens
Prupe.8G059500 Prunus persica
Psat1g216080 Pisum sativum
PSO017G6973 Papaver somniferum
PSO478G1210 Papaver somniferum
PSO541G0753 Papaver somniferum
PSO781G0069 Papaver somniferum
QL03p046280 Quercus lobata
QL11p021359 Quercus lobata
RcHm_v2.0_Chr6g0269191 Rosa chinensis
Rhsim09G0070500 Rhododendron simsii
Rhsim09G0070600 Rhododendron simsii
Rhsim11G0137000 Rhododendron simsii
Sabra17G0040400 Salix brachista
Sabra17G0045200 Salix brachista
Sed0013803 Sechium edule
Sed0017399 Sechium edule
Sed0019111 Sechium edule
SEGI_10884 Sequoiadendron giganteum
SEGI_16820 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41088 Striga asiatica
SGA_v2.0_scaffold83G26305 Striga asiatica
SHI31064 Sapria himalayana
SMO147G0238 Selaginella moellendorffii
SMO199G0128 Selaginella moellendorffii
SMO361G0052 Selaginella moellendorffii
Solyc01g105290.3 Solanum lycopersicum
Solyc02g014670.2 Solanum lycopersicum
Sopen01g047790 Solanum pennellii
Sopen02g002620 Solanum pennellii
Sp2g27290 Schrenkiella parvula
Sp3g17940 Schrenkiella parvula
TAR376G0889 Trochodendron aralioides
TAR628G0778 Trochodendron aralioides
THA.LOC104799930 Tarenaya hassleriana
THA.LOC104815236 Tarenaya hassleriana
Thecc.02G136500 Theobroma cacao
Thecc.02G137400 Theobroma cacao
Thhalv10004757m.g Eutrema salsugineum
Thhalv10022300m.g Eutrema salsugineum
TPR.G20350 Trifolium pratense
TPR.G25231 Trifolium pratense
TWI23G1307 Tripterygium wilfordii
TWI59G0056 Tripterygium wilfordii
TWI74G0952 Tripterygium wilfordii
vmacro01828 Vaccinium macrocarpon

User provided reference genes

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