Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23930 Brassica napus
Aa31LG2G2030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2455 Anthoceros agrestis
Actinidia03821 Actinidia chinensis
Actinidia03822 Actinidia chinensis
Actinidia06816 Actinidia chinensis
Actinidia06817 Actinidia chinensis
Actinidia06818 Actinidia chinensis
Actinidia06819 Actinidia chinensis
Actinidia06820 Actinidia chinensis
Actinidia06821 Actinidia chinensis
Actinidia11721 Actinidia chinensis
Actinidia11722 Actinidia chinensis
Actinidia11723 Actinidia chinensis
Actinidia23236 Actinidia chinensis
Actinidia26096 Actinidia chinensis
Actinidia26097 Actinidia chinensis
Actinidia26098 Actinidia chinensis
Ah.02g118650 Amaranthus hybridus
Ah.02g118790 Amaranthus hybridus
AL2G19160 Arabidopsis lyrata
AL2G19220 Arabidopsis lyrata
Aqoxy5G00090 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9XF1RW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6B23X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZPSV32 Arachis hypogaea
AT1G64790 Arabidopsis thaliana
ATR0787G173 Amborella trichopoda
ATR0787G183 Amborella trichopoda
Atru.chr2.1127 Acer truncatum
AUR62000638 Chenopodium quinoa
AUR62006993 Chenopodium quinoa
BcaB05g23590 Brassica carinata
BcaC03g16020 Brassica carinata
BolC2t09791H Brassica oleracea
BraA02t07385Z Brassica rapa
C02p37720 Brassica napus
CAN.G131.15 Capsicum annuum
CAN.G131.16 Capsicum annuum
CANSAT54G2238 Cannabis sativa
CARHR056140 Cardamine hirsuta
CARHR056150 Cardamine hirsuta
CARHR293160 Cardamine hirsuta
Carub.0012s0016 Capsella rubella
Ca_09471_v3 Cicer arietinum L.
CBR_g28040 Chara braunii
Cc09_g03080 Coffea canephora
CDE09G0101 Ceratophyllum demersum
CDE09G0882 Ceratophyllum demersum
Ciclev10018428m.g Citrus clementina
CiPaw.07G075200 Carya illinoinensis
CiPaw.07G075300 Carya illinoinensis
ClCG11G010250 Citrullus lanatus
COL.COLO4_37867 Corchorus olitorius
Cpa.g.sc51.21 Carica papaya
Cpa.g.sc51.22 Carica papaya
Cre01.g015600 Chlamydomonas reinhardtii
CsaV3_2G010070 Cucumis sativus L.
CSS0034895 Camellia sinensis var. sinensis
CSS0037513 Camellia sinensis var. sinensis
CSS0043374 Camellia sinensis var. sinensis
DCAR_015795 Daucus carota
DCAR_025592 Daucus carota
DCAR_029994 Daucus carota
DCAR_029995 Daucus carota
DCAR_032356 Daucus carota
Dinv06951 Davidia involucrata
Duzib177G0185 Durio zibethinus
ECA232G1705 Erigeron canadensis
EL10Ac4g09775 Beta vulgaris
Eucgr.H04206 Eucalyptus grandis
FAN02G3021 Fragaria x ananassa
FAN04G0390 Fragaria x ananassa
FAN05G0534 Fragaria x ananassa
FAN05G3617 Fragaria x ananassa
FAN09G1546 Fragaria x ananassa
FAN14G4461 Fragaria x ananassa
FAN14G5315 Fragaria x ananassa
FAN27G0630 Fragaria x ananassa
FvH4_6g01410 Fragaria vesca
Glyma.03G252300 Glycine max
Glyma.19G249900 Glycine max
Gohir.A11G243500 Gossypium hirsutum
Gohir.D11G253200 Gossypium hirsutum
Gorai.007G272000 Gossypium raimondii
GSVIVG01026340001 Vitis vinifera
HanXRQChr05g0145131 Helianthus annuus
Haze_04475 Corylus avellana
Haze_04476 Corylus avellana
Hma1.2p1_0123F.1_g058180 Hydrangea macrophylla
Hma1.2p1_0123F.1_g058190 Hydrangea macrophylla
HPP92_001295 Vanilla planifolia
Hund07170 Selenicereus undatus
Hund17244 Selenicereus undatus
Hund28419 Selenicereus undatus
Hund28421 Selenicereus undatus
Lalb_Chr04g0261971 Lupinus albus
Lj1g0024446 Lotus japonicus
Lj2A47G46 Lonicera japonica
Lj2A47G48 Lonicera japonica
Lj2C47T5 Lonicera japonica
Lsat_1_v5_gn_1_12580 Lactuca sativa
Lsat_1_v5_gn_2_111060 Lactuca sativa
Lsat_1_v5_gn_2_9720 Lactuca sativa
Lsat_1_v5_gn_3_136501 Lactuca sativa
Lsat_1_v5_gn_3_37160 Lactuca sativa
Lsat_1_v5_gn_3_51581 Lactuca sativa
Lsat_1_v5_gn_5_100381 Lactuca sativa
Lsat_1_v5_gn_5_158860 Lactuca sativa
Lsat_1_v5_gn_5_4141 Lactuca sativa
Lsat_1_v5_gn_6_66841 Lactuca sativa
Lsat_1_v5_gn_7_36381 Lactuca sativa
Lsat_1_v5_gn_7_43461 Lactuca sativa
Lsat_1_v5_gn_8_118300 Lactuca sativa
Lsat_1_v5_gn_8_52980 Lactuca sativa
Lsat_1_v5_gn_8_84401 Lactuca sativa
Lsat_1_v5_gn_8_87461 Lactuca sativa
Lsat_1_v5_gn_9_45981 Lactuca sativa
Manes.08G142350 Manihot esculenta
Manes.09G146200 Manihot esculenta
Mapoly0135s0025 Marchantia polymorpha
MBI07_g08903_MAGBIO Magnolia biondii
MCO11G232 Micromonas commoda
MD04G1165900 Malus domestica
MD04G1233800 Malus domestica
MD04G1233900 Malus domestica
MD04G1234000 Malus domestica
MD04G1234100 Malus domestica
MD04G1234200 Malus domestica
MD08G1086100 Malus domestica
MD12G1252000 Malus domestica
Medtr7g116425 Medicago truncatula
MELO3C008660.2 Cucumis melo
Migut.F02049 Erythranthe guttata
Nitab4.5_0000841g0120 Nicotiana tabacum
Nitab4.5_0001498g0050 Nicotiana tabacum
Nitab4.5_0002063g0040 Nicotiana tabacum
Nitab4.5_0018351g0010 Nicotiana tabacum
Nitab4.5_0019712g0010 Nicotiana tabacum
Nitab4.5_0019712g0020 Nicotiana tabacum
Nn1g03055 Nelumbo nucifera
Oeu055042.1 Olea europaea
Os02g0538400 Oryza sativa ssp. japonica
Os03g0721200 Oryza sativa ssp. japonica
Peaxi162Scf00071g00269 Petunia axillaris
Peaxi162Scf00071g02610 Petunia axillaris
PGR004G2196 Punica granatum
Phvul.006G107000 Phaseolus vulgaris
Potri.019G024200 Populus trichocarpa
Pp3c22_8910 Physcomitrium patens
PRCOL_00002743 Prasinoderma coloniale
Prupe.6G353600 Prunus persica
Psat0s4268g0040 Pisum sativum
Psat2g117360 Pisum sativum
Psat2g117480 Pisum sativum
Psat2g117520 Pisum sativum
Psat7g226920 Pisum sativum
PSO104G0170 Papaver somniferum
PSO764G0333 Papaver somniferum
PSO832G2952 Papaver somniferum
QL03p032673 Quercus lobata
QL03p032698 Quercus lobata
RcHm_v2.0_Chr3g0449041 Rosa chinensis
RcHm_v2.0_Chr5g0043171 Rosa chinensis
RcHm_v2.0_Chr6g0282721 Rosa chinensis
Rhsim05G0170000 Rhododendron simsii
Sabra19G0034100 Salix brachista
SalBow1G0653 Salvia bowleyana
SalBow1G3637 Salvia bowleyana
SalBow1G5750 Salvia bowleyana
Sc09g0001810 Simmondsia chinensis
Sed0015322 Sechium edule
SEGI_04281 Sequoiadendron giganteum
SEGI_05359 Sequoiadendron giganteum
SEGI_06305 Sequoiadendron giganteum
SEGI_07325 Sequoiadendron giganteum
SEGI_09842 Sequoiadendron giganteum
SEGI_11076 Sequoiadendron giganteum
SEGI_13873 Sequoiadendron giganteum
SEGI_16883 Sequoiadendron giganteum
SEGI_16908 Sequoiadendron giganteum
SEGI_23671 Sequoiadendron giganteum
SEGI_25764 Sequoiadendron giganteum
SEGI_30748 Sequoiadendron giganteum
SEGI_35396 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21472 Striga asiatica
SHI15636 Sapria himalayana
SHI15643 Sapria himalayana
SHI15645 Sapria himalayana
SMO353G0297 Selaginella moellendorffii
SMO356G0295 Selaginella moellendorffii
Solyc04g050510.3 Solanum lycopersicum
Solyc04g050520.3 Solanum lycopersicum
Sopen04g021290 Solanum pennellii
SpUn0003_0310 Schrenkiella parvula
TAR365G0326 Trochodendron aralioides
TAR636G0188 Trochodendron aralioides
TAR636G2059 Trochodendron aralioides
THA.LOC104821587 Tarenaya hassleriana
Thecc.05G265800 Theobroma cacao
Thhalv10022486m.g Eutrema salsugineum
TPR.G4710 Trifolium pratense
TWI60G0900 Tripterygium wilfordii
TWI60G1601 Tripterygium wilfordii
unitig_37.g12281 Utricularia gibba
unitig_37.g12282 Utricularia gibba
vmacro19973 Vaccinium macrocarpon
vmacro19974 Vaccinium macrocarpon
VMungo0540G1922 Vigna mungo
VMungo1309G0440 Vigna mungo
Zm00001eb055550 Zea mays
Zm00001eb208170 Zea mays
Zm00001eb208180 Zea mays
Zm00001eb208190 Zea mays

User provided reference genes

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