Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p23070 Brassica napus
A09p12220 Brassica napus
Aa31LG6G15020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2221 Anthoceros agrestis
Actinidia02392 Actinidia chinensis
Actinidia06514 Actinidia chinensis
Actinidia06515 Actinidia chinensis
Actinidia25308 Actinidia chinensis
Actinidia30717 Actinidia chinensis
Actinidia37382 Actinidia chinensis
Actinidia37399 Actinidia chinensis
Ah.01g007410 Amaranthus hybridus
Ah.01g023960 Amaranthus hybridus
Ah.02g123570 Amaranthus hybridus
Ah.03g139960 Amaranthus hybridus
AL7G12570 Arabidopsis lyrata
Aqoxy5G01385 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.88QBIW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CWW4UK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ND4N8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QT15T4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6BZ3D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4FDPH Arachis hypogaea
AT4G38062 Arabidopsis thaliana
ATR0767G239 Amborella trichopoda
Atru.chr3.1246 Acer truncatum
Atru.chr6.1256 Acer truncatum
Atru.chr6.1263 Acer truncatum
Atru.chr6.1264 Acer truncatum
Atru.chr6.1265 Acer truncatum
AUR62003664 Chenopodium quinoa
AUR62012886 Chenopodium quinoa
AUR62017973 Chenopodium quinoa
AUR62027110 Chenopodium quinoa
BcaB03g12309 Brassica carinata
BcaB03g12311 Brassica carinata
BcaB03g12312 Brassica carinata
BcaB03g12313 Brassica carinata
BcaC01g00350 Brassica carinata
BolC3t20120H Brassica oleracea
BraA08t34266Z Brassica rapa
C03p33030 Brassica napus
C03p78760 Brassica napus
CAN.G1344.16 Capsicum annuum
CANSAT01G3047 Cannabis sativa
CANSAT54G2948 Cannabis sativa
CARHR246480 Cardamine hirsuta
Carub.0007s0215 Capsella rubella
Ca_00164_v3 Cicer arietinum L.
Ca_22609_v3 Cicer arietinum L.
Ca_22705_v3 Cicer arietinum L.
Cc07_g14090 Coffea canephora
CDE01G0670 Ceratophyllum demersum
Cfa005735 Carpinus fangiana
Cfa006881 Carpinus fangiana
Ciclev10024755m.g Citrus clementina
CiPaw.05G029500 Carya illinoinensis
CiPaw.08G140100 Carya illinoinensis
ClCG01G018360 Citrullus lanatus
CsaV3_6G044990 Cucumis sativus L.
CSS0015283 Camellia sinensis var. sinensis
CSS0015843 Camellia sinensis var. sinensis
CSS0047518 Camellia sinensis var. sinensis
DCAR_014184 Daucus carota
DCAR_021912 Daucus carota
Dinv13601 Davidia involucrata
Dinv16002 Davidia involucrata
Dinv20194 Davidia involucrata
Dinv24148 Davidia involucrata
Dinv29065 Davidia involucrata
Dinv36931 Davidia involucrata
Duzib147G1583 Durio zibethinus
Duzib187G1957 Durio zibethinus
Duzib264G0048 Durio zibethinus
Duzib264G0489 Durio zibethinus
Duzib264G0817 Durio zibethinus
Duzib264G0894 Durio zibethinus
ECA234G2607 Erigeron canadensis
ECA238G4297 Erigeron canadensis
EL10Ac6g15204 Beta vulgaris
EL10Ac9g22072 Beta vulgaris
Eucgr.I00559 Eucalyptus grandis
FAN19G3065 Fragaria x ananassa
FAN23G2642 Fragaria x ananassa
FAN23G2850 Fragaria x ananassa
FAN24G0742 Fragaria x ananassa
FAN26G1555 Fragaria x ananassa
FAN28G2653 Fragaria x ananassa
FvH4_1g19631 Fragaria vesca
FvH4_2g11711 Fragaria vesca
Glyma.01G023100 Glycine max
Glyma.08G279600 Glycine max
Glyma.09G199166 Glycine max
Glyma.09G199232 Glycine max
Glyma.13G256600 Glycine max
Glyma.15G058300 Glycine max
Glyma.17G184550 Glycine max
Glyma.18G147000 Glycine max
Gohir.A02G144501 Gossypium hirsutum
Gohir.A11G050500 Gossypium hirsutum
Gohir.A11G207000 Gossypium hirsutum
Gohir.D03G036033 Gossypium hirsutum
Gohir.D11G053800 Gossypium hirsutum
Gohir.D11G216300 Gossypium hirsutum
Gorai.003G037800 Gossypium raimondii
Gorai.007G058900 Gossypium raimondii
Gorai.007G232500 Gossypium raimondii
GSVIVG01005928001 Vitis vinifera
HanXRQChr10g0289971 Helianthus annuus
HanXRQChr11g0346961 Helianthus annuus
Haze_03871 Corylus avellana
Haze_10522 Corylus avellana
Hma1.2p1_1093F.1_g256220 Hydrangea macrophylla
HPP92_014211 Vanilla planifolia
HPP92_026470 Vanilla planifolia
Lalb_Chr05g0216371 Lupinus albus
Lalb_Chr05g0228511 Lupinus albus
Lalb_Chr20g0122921 Lupinus albus
Lj2g0008675 Lotus japonicus
Lj2P534T19 Lonicera japonica
Lj2P534T21 Lonicera japonica
Lj4g0006883 Lotus japonicus
Lj5C230T2 Lonicera japonica
Lj6g0024173 Lotus japonicus
Lsat_1_v5_gn_2_70360 Lactuca sativa
Lsat_1_v5_gn_5_109820 Lactuca sativa
Manes.10G098500 Manihot esculenta
Manes.13G086134 Manihot esculenta
Manes.13G100000 Manihot esculenta
Mapoly0094s0016 Marchantia polymorpha
MBI16_g12462_MAGBIO Magnolia biondii
MD01G1039400 Malus domestica
MD05G1047500 Malus domestica
MD10G1054400 Malus domestica
Medtr2g009620 Medicago truncatula
Medtr5g032080 Medicago truncatula
Medtr8g471150 Medicago truncatula
MELO3C007714.2 Cucumis melo
Migut.B00551 Erythranthe guttata
Migut.K00798 Erythranthe guttata
MSTRG.15688 Avicennia marina
MSTRG.20280 Avicennia marina
Nitab4.5_0002017g0020 Nicotiana tabacum
Nitab4.5_0004153g0070 Nicotiana tabacum
Nitab4.5_0007624g0010 Nicotiana tabacum
Nitab4.5_0008998g0020 Nicotiana tabacum
Nn5g29883 Nelumbo nucifera
Oeu063542.1 Olea europaea
Os03g0691500 Oryza sativa ssp. japonica
Peaxi162Scf00003g00329 Petunia axillaris
Peaxi162Scf00191g00034 Petunia axillaris
PGR031G3296 Punica granatum
PGSC0003DMG400016132 Solanum tuberosum
PGSC0003DMG400037454 Solanum tuberosum
Phvul.002G147100 Phaseolus vulgaris
Phvul.003G289000 Phaseolus vulgaris
Phvul.006G201900 Phaseolus vulgaris
Potri.001G415800 Populus trichocarpa
Potri.005G076400 Populus trichocarpa
Potri.011G131500 Populus trichocarpa
Pp3c14_17140 Physcomitrium patens
Prupe.6G201700 Prunus persica
Prupe.8G069900 Prunus persica
Psat1g214080 Pisum sativum
Psat4g119640 Pisum sativum
PSO063G1758 Papaver somniferum
PSO170G5608 Papaver somniferum
PSO210G4022 Papaver somniferum
PSO782G1877 Papaver somniferum
QL01p016133 Quercus lobata
QL06p035789 Quercus lobata
QL11p025213 Quercus lobata
QL11p025224 Quercus lobata
RcHm_v2.0_Chr2g0111201 Rosa chinensis
RcHm_v2.0_Chr6g0271001 Rosa chinensis
Rhsim10G0172900 Rhododendron simsii
Rhsim11G0139800 Rhododendron simsii
Rhsim11G0140200 Rhododendron simsii
Sabra11G0118600 Salix brachista
Sabra16G0282500 Salix brachista
Sc03g0000330 Simmondsia chinensis
Sc08g0003910 Simmondsia chinensis
Sed0023170 Sechium edule
Sed0023722 Sechium edule
SEGI_05807 Sequoiadendron giganteum
SEGI_22356 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32126 Striga asiatica
SGA_v2.0_scaffold83G26376 Striga asiatica
Solyc10g047540.3 Solanum lycopersicum
Solyc11g010620.3 Solanum lycopersicum
Sopen10g017840 Solanum pennellii
Sopen11g005420 Solanum pennellii
Sp7g35710 Schrenkiella parvula
TAR381G0021 Trochodendron aralioides
TAR625G0274 Trochodendron aralioides
TAR636G1409 Trochodendron aralioides
THA.LOC104807671 Tarenaya hassleriana
Thecc.01G090500 Theobroma cacao
Thhalv10027141m.g Eutrema salsugineum
TPR.G14606 Trifolium pratense
TPR.G29979 Trifolium pratense
TPR.G39012 Trifolium pratense
TPR.G9507 Trifolium pratense
TWI53G1641 Tripterygium wilfordii
TWI77G0115 Tripterygium wilfordii
unitig_32.g10709 Utricularia gibba
vmacro13008 Vaccinium macrocarpon
VMungo0251G1378 Vigna mungo
VMungo0299G0001 Vigna mungo
VMungo1215G0193 Vigna mungo
VMungo1215G1834 Vigna mungo
Zm00001eb053540 Zea mays
Zm00001eb217110 Zea mays
Zm00001eb374340 Zea mays

User provided reference genes

Program Settings