Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01780 Brassica napus
A04p33400 Brassica napus
A05p04750 Brassica napus
A07p25000 Brassica napus
A09p52480 Brassica napus
Aa31LG10G14340 Aethionema arabicum
Aa31LG1G26150 Aethionema arabicum
Actinidia05791 Actinidia chinensis
Actinidia30956 Actinidia chinensis
Actinidia33295 Actinidia chinensis
Ah.05g177570 Amaranthus hybridus
AL4G43640 Arabidopsis lyrata
AL5G42410 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.92G265 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RVTT15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9U8W4 Arachis hypogaea
AT2G44600 Arabidopsis thaliana
AT3G60200 Arabidopsis thaliana
ATR0665G229 Amborella trichopoda
Atru.chr5.38 Acer truncatum
Atru.chr5.68 Acer truncatum
AUR62013800 Chenopodium quinoa
AUR62023357 Chenopodium quinoa
BcaB02g07428 Brassica carinata
BcaB02g08186 Brassica carinata
BcaB02g08836 Brassica carinata
BcaB06g29388 Brassica carinata
BcaB06g29389 Brassica carinata
BcaC02g07102 Brassica carinata
BcaC02g10119 Brassica carinata
BcaC02g12291 Brassica carinata
BcaC07g40415 Brassica carinata
BcaC07g40516 Brassica carinata
BcaC07g40517 Brassica carinata
BcaC07g40522 Brassica carinata
BcaC08g45026 Brassica carinata
BcaC08g45035 Brassica carinata
BolC4t22186H Brassica oleracea
BolC4t24815H Brassica oleracea
BolC4t28614H Brassica oleracea
BolC6t37821H Brassica oleracea
BolC8t51117H Brassica oleracea
BraA04t15902Z Brassica rapa
BraA04t18801Z Brassica rapa
BraA05t19451Z Brassica rapa
BraA07t30140Z Brassica rapa
BraA09t40678Z Brassica rapa
C04p05560 Brassica napus
C04p32500 Brassica napus
C04p71110 Brassica napus
C06p26570 Brassica napus
C08p35230 Brassica napus
CAN.G756.11 Capsicum annuum
CANSAT25G0028 Cannabis sativa
CARHR139820 Cardamine hirsuta
CARHR170520 Cardamine hirsuta
Carub.0004s2715 Capsella rubella
Carub.0005s2693 Capsella rubella
Carub.0005s2694 Capsella rubella
Ca_08022_v3 Cicer arietinum L.
Ca_23143_v3 Cicer arietinum L.
Cc02_g25690 Coffea canephora
CDE02G0869 Ceratophyllum demersum
CDE02G2076 Ceratophyllum demersum
CDE11G0290 Ceratophyllum demersum
CDE12G0434 Ceratophyllum demersum
Cfa011019 Carpinus fangiana
Ciclev10021280m.g Citrus clementina
CiPaw.13G021700 Carya illinoinensis
CiPaw.14G016300 Carya illinoinensis
ClCG06G000800 Citrullus lanatus
COL.COLO4_12347 Corchorus olitorius
CsaV3_3G010380 Cucumis sativus L.
CsaV3_6G006600 Cucumis sativus L.
DCAR_015777 Daucus carota
DCAR_025021 Daucus carota
DCAR_029522 Daucus carota
Dinv43584 Davidia involucrata
Dinv44017 Davidia involucrata
Duzib133G0015 Durio zibethinus
Duzib138G0449 Durio zibethinus
Duzib268G0279 Durio zibethinus
ECA234G0702 Erigeron canadensis
ECA236G2684 Erigeron canadensis
ECA248G0129 Erigeron canadensis
EL10Ac1g00705 Beta vulgaris
Eucgr.D01170 Eucalyptus grandis
Eucgr.E01708 Eucalyptus grandis
FAN01G1315 Fragaria x ananassa
FAN03G3421 Fragaria x ananassa
FAN06G1121 Fragaria x ananassa
FAN10G1238 Fragaria x ananassa
FAN10G4096 Fragaria x ananassa
FvH4_7g08720 Fragaria vesca
Glyma.03G103001 Glycine max
Glyma.07G120800 Glycine max
Glyma.09G247300 Glycine max
Glyma.18G245700 Glycine max
Gohir.A08G055900 Gossypium hirsutum
Gohir.A08G141000 Gossypium hirsutum
Gohir.A11G073800 Gossypium hirsutum
Gohir.A12G099500 Gossypium hirsutum
Gohir.D08G065200 Gossypium hirsutum
Gohir.D08G162100 Gossypium hirsutum
Gohir.D11G078500 Gossypium hirsutum
Gohir.D12G102500 Gossypium hirsutum
Gorai.004G067500 Gossypium raimondii
Gorai.004G168400 Gossypium raimondii
Gorai.007G084000 Gossypium raimondii
Gorai.008G111700 Gossypium raimondii
HanXRQChr01g0017501 Helianthus annuus
HanXRQChr04g0113081 Helianthus annuus
HanXRQChr06g0168251 Helianthus annuus
HanXRQChr11g0344041 Helianthus annuus
HanXRQChr17g0550401 Helianthus annuus
Haze_02907 Corylus avellana
Hma1.2p1_0021F.1_g014275 Hydrangea macrophylla
Hma1.2p1_0021F.1_g014290 Hydrangea macrophylla
HPP92_022061 Vanilla planifolia
HPP92_025455 Vanilla planifolia
Hund17130 Selenicereus undatus
Lalb_Chr03g0040811 Lupinus albus
Lalb_Chr12g0210321 Lupinus albus
Lalb_Chr19g0126271 Lupinus albus
Lj1g0019973 Lotus japonicus
Lj3g0018708 Lotus japonicus
Lj7C552T25 Lonicera japonica
Lj9P549T18 Lonicera japonica
Lsat_1_v5_gn_0_5020 Lactuca sativa
Lsat_1_v5_gn_4_38621 Lactuca sativa
Lsat_1_v5_gn_7_11660 Lactuca sativa
Manes.05G059100 Manihot esculenta
MBI04_g03333_MAGBIO Magnolia biondii
MD07G1088100 Malus domestica
Medtr1g087340 Medicago truncatula
MELO3C006262.2 Cucumis melo
MELO3C022461.2 Cucumis melo
Migut.B01481 Erythranthe guttata
Migut.N01712 Erythranthe guttata
Migut.O00568 Erythranthe guttata
MSTRG.17102 Avicennia marina
MSTRG.20661 Avicennia marina
MSTRG.28131 Avicennia marina
Nitab4.5_0000204g0050 Nicotiana tabacum
Nitab4.5_0004088g0100 Nicotiana tabacum
Nitab4.5_0006873g0020 Nicotiana tabacum
Nitab4.5_0016340g0010 Nicotiana tabacum
Nn1g00622 Nelumbo nucifera
Nn3g16835 Nelumbo nucifera
Nn6g33672 Nelumbo nucifera
Oeu024385.1 Olea europaea
Oeu034770.1 Olea europaea
Oeu037407.1 Olea europaea
Os02g0689500 Oryza sativa ssp. japonica
Os04g0588000 Oryza sativa ssp. japonica
Os10g0567600 Oryza sativa ssp. japonica
Peaxi162Scf00745g00012 Petunia axillaris
PGR004G1173 Punica granatum
PGR042G2698 Punica granatum
PGSC0003DMG400001684 Solanum tuberosum
Phvul.008G051200 Phaseolus vulgaris
Phvul.010G041200 Phaseolus vulgaris
Potri.002G135400 Populus trichocarpa
Potri.014G043800 Populus trichocarpa
Prupe.2G114900 Prunus persica
Psat3g101600 Pisum sativum
Psat4g219160 Pisum sativum
PSO339G5444 Papaver somniferum
PSO648G0113 Papaver somniferum
QL04p025941 Quercus lobata
QL04p026933 Quercus lobata
Rhsim01G0144500 Rhododendron simsii
Rhsim07G0039500 Rhododendron simsii
Sabra02G0105200 Salix brachista
Sabra14G0031700 Salix brachista
SalBow1G1338 Salvia bowleyana
SalBow4G0872 Salvia bowleyana
SalBow5G4877 Salvia bowleyana
Sc18g0003760 Simmondsia chinensis
Sc23g0004510 Simmondsia chinensis
Sed0008398 Sechium edule
Sed0018587 Sechium edule
Sed0022506 Sechium edule
SGA_v2.0_scaffold77G25250 Striga asiatica
SGA_v2.0_scaffold95G28726 Striga asiatica
Solyc01g088530.2 Solanum lycopersicum
Sopen01g035390 Solanum pennellii
Sp4g26690 Schrenkiella parvula
Sp5g03010 Schrenkiella parvula
TAR374G0545 Trochodendron aralioides
TAR375G0380 Trochodendron aralioides
THA.LOC104803082 Tarenaya hassleriana
THA.LOC104817174 Tarenaya hassleriana
THA.LOC104827680 Tarenaya hassleriana
Thecc.01G403000 Theobroma cacao
Thhalv10001551m.g Eutrema salsugineum
Thhalv10006502m.g Eutrema salsugineum
TPR.G27403 Trifolium pratense
TPR.G6017 Trifolium pratense
TWI23G1002 Tripterygium wilfordii
TWI59G0953 Tripterygium wilfordii
unitig_0.g1329 Utricularia gibba
unitig_0.g2752 Utricularia gibba
unitig_26.g8864 Utricularia gibba
unitig_61.g26423 Utricularia gibba
unitig_748.g7124 Utricularia gibba
unitig_750.g28400 Utricularia gibba
unitig_76.g29073 Utricularia gibba
VMungo0331G1717 Vigna mungo
VMungo1383G2278 Vigna mungo
Zm00001eb024120 Zea mays
Zm00001eb072580 Zea mays
Zm00001eb187670 Zea mays
Zm00001eb251070 Zea mays
Zm00001eb390650 Zea mays

User provided reference genes

Program Settings