Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G13020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2291 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2802 Anthoceros agrestis
Actinidia01883 Actinidia chinensis
Actinidia05633 Actinidia chinensis
Actinidia35450 Actinidia chinensis
Actinidia37095 Actinidia chinensis
Ah.01g004570 Amaranthus hybridus
AL6G33640 Arabidopsis lyrata
Aqoxy2G01378 Aquilegia oxysepala
Aqoxy2G01381 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1H33IB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7SQ1BH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BKN5FL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JM151Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3RF3D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N15JJB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RX4SH7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6NIDZ Arachis hypogaea
AT5G22620 Arabidopsis thaliana
ATR0730G181 Amborella trichopoda
ATR0820G288 Amborella trichopoda
Atru.BG.121.p Acer truncatum
Atru.chr10.1885 Acer truncatum
Atru.chr3.3368 Acer truncatum
AUR62014820 Chenopodium quinoa
AUR62017015 Chenopodium quinoa
AUR62023927 Chenopodium quinoa
AUR62038312 Chenopodium quinoa
BcaB05g22717 Brassica carinata
BcaC03g13898 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00540 Brassica napus
BolC2t07176H Brassica oleracea
BraA02t05669Z Brassica rapa
C02p11040 Brassica napus
CAN.G1164.29 Capsicum annuum
CAN.G919.9 Capsicum annuum
CANSAT54G2969 Cannabis sativa
CARHR190960 Cardamine hirsuta
Carub.0006s2034 Capsella rubella
Ca_19376_v3 Cicer arietinum L.
CBR_g223 Chara braunii
CBR_g51943 Chara braunii
Cc01_g09760 Coffea canephora
Cc02_g13340 Coffea canephora
CDE06G0630 Ceratophyllum demersum
CDE08G1127 Ceratophyllum demersum
CDE09G1252 Ceratophyllum demersum
Cfa010078 Carpinus fangiana
Cfa023367 Carpinus fangiana
Ciclev10017672m.g Citrus clementina
Ciclev10028226m.g Citrus clementina
CiPaw.09G059700 Carya illinoinensis
CiPaw.13G140700 Carya illinoinensis
ClCG02G021940 Citrullus lanatus
ClCG03G006040 Citrullus lanatus
COL.COLO4_00022 Corchorus olitorius
COL.COLO4_19304 Corchorus olitorius
COL.COLO4_31477 Corchorus olitorius
Cpa.g.sc27.42 Carica papaya
Cpa.g.sc47.68 Carica papaya
Cpa.g.sc47.69 Carica papaya
Cre05.g232550 Chlamydomonas reinhardtii
CsaV3_1G012290 Cucumis sativus L.
CsaV3_6G014770 Cucumis sativus L.
CSS0026325 Camellia sinensis var. sinensis
CSS0042724 Camellia sinensis var. sinensis
DCAR_012167 Daucus carota
Dinv29429 Davidia involucrata
Duzib160G0318 Durio zibethinus
Duzib168G2119 Durio zibethinus
Duzib235G0833 Durio zibethinus
ECA234G1300 Erigeron canadensis
ECA248G1096 Erigeron canadensis
EL10Ac3g05977 Beta vulgaris
EL10Ac4g08797 Beta vulgaris
EL10Ac4g09060 Beta vulgaris
EL10Ac5g11576 Beta vulgaris
EL10Ac8g20381 Beta vulgaris
EL10Ac9g21089 Beta vulgaris
Eucgr.E03312 Eucalyptus grandis
Eucgr.J00431 Eucalyptus grandis
FAN11G0876 Fragaria x ananassa
FAN21G2169 Fragaria x ananassa
FAN25G0027 Fragaria x ananassa
FvH4_3g24210 Fragaria vesca
Glyma.11G188800 Glycine max
Glyma.12G085900 Glycine max
Glyma.13G239400 Glycine max
Glyma.15G073900 Glycine max
Gohir.A08G003700 Gossypium hirsutum
Gohir.A10G025700 Gossypium hirsutum
Gohir.D08G014000 Gossypium hirsutum
Gohir.D10G026400 Gossypium hirsutum
Gorai.004G008300 Gossypium raimondii
Gorai.011G027700 Gossypium raimondii
GSVIVG01005201001 Vitis vinifera
GSVIVG01031393001 Vitis vinifera
HanXRQChr01g0016761 Helianthus annuus
HanXRQChr16g0517701 Helianthus annuus
Haze_06399 Corylus avellana
Haze_06418 Corylus avellana
Haze_06420 Corylus avellana
Haze_23444 Corylus avellana
Hma1.2p1_0097F.1_g047990 Hydrangea macrophylla
Hma1.2p1_0097F.1_g048010 Hydrangea macrophylla
Hma1.2p1_0097F.1_g048020 Hydrangea macrophylla
HPP92_009049 Vanilla planifolia
HPP92_023828 Vanilla planifolia
HPP92_023894 Vanilla planifolia
Hund00771 Selenicereus undatus
Hund21224 Selenicereus undatus
Lalb_Chr01g0004771 Lupinus albus
Lj1A1206T65 Lonicera japonica
Lj1A222T57 Lonicera japonica
Lj1C222T3 Lonicera japonica
Lj3g0000356 Lotus japonicus
Lj6g0005134 Lotus japonicus
Lsat_1_v5_gn_1_62161 Lactuca sativa
Lsat_1_v5_gn_2_75321 Lactuca sativa
Lsat_1_v5_gn_4_52961 Lactuca sativa
Lsat_1_v5_gn_4_53020 Lactuca sativa
Lsat_1_v5_gn_6_93560 Lactuca sativa
Manes.11G157700 Manihot esculenta
Manes.16G027300 Manihot esculenta
Mapoly0014s0161 Marchantia polymorpha
MBI07_g12789_MAGBIO Magnolia biondii
MBI07_g32648_MAGBIO Magnolia biondii
MBI17_g11652_MAGBIO Magnolia biondii
MCO15G571 Micromonas commoda
MD11G1158000 Malus domestica
Medtr2g013570 Medicago truncatula
Medtr4g055260 Medicago truncatula
Medtr6g007350 Medicago truncatula
Medtr7g446330 Medicago truncatula
MELO3C002601.2 Cucumis melo
MELO3C021448.2 Cucumis melo
Migut.D02339 Erythranthe guttata
Migut.D02358 Erythranthe guttata
MSTRG.7332 Avicennia marina
Nitab4.5_0003082g0060 Nicotiana tabacum
Nitab4.5_0003432g0030 Nicotiana tabacum
Nitab4.5_0008695g0010 Nicotiana tabacum
Nitab4.5_0010762g0010 Nicotiana tabacum
Nn1g06560 Nelumbo nucifera
Nn4g23245 Nelumbo nucifera
Nn6g35036 Nelumbo nucifera
Oeu010656.1 Olea europaea
Oeu057907.2 Olea europaea
Os01g0237100 Oryza sativa ssp. japonica
Os11g0150100 Oryza sativa ssp. japonica
Peaxi162Scf00114g00117 Petunia axillaris
Peaxi162Scf00661g00523 Petunia axillaris
PGR042G3534 Punica granatum
PGR119G0956 Punica granatum
PGSC0003DMG400007149 Solanum tuberosum
PGSC0003DMG400029722 Solanum tuberosum
Phvul.006G185700 Phaseolus vulgaris
Phvul.011G090600 Phaseolus vulgaris
Potri.004G187700 Populus trichocarpa
Potri.011G052200 Populus trichocarpa
Pp3c12_710 Physcomitrium patens
Pp3c25_8910 Physcomitrium patens
PRCOL_00005717 Prasinoderma coloniale
Prupe.4G046900 Prunus persica
Prupe.6G119800 Prunus persica
Psat0ss2518g0360 Pisum sativum
Psat7g143120 Pisum sativum
PSO339G3172 Papaver somniferum
PSO384G2827 Papaver somniferum
QL01p013617 Quercus lobata
QL05p040239 Quercus lobata
RcHm_v2.0_Chr5g0043311 Rosa chinensis
Rhsim01G0207700 Rhododendron simsii
Rhsim13G0177900 Rhododendron simsii
Sabra04G0126600 Salix brachista
Sabra11G0035900 Salix brachista
SalBow6G4264 Salvia bowleyana
SalBow8G0734 Salvia bowleyana
SalBow8G4396 Salvia bowleyana
Sc05g0007690 Simmondsia chinensis
Sc21g0004730 Simmondsia chinensis
Sed0005848 Sechium edule
Sed0013439 Sechium edule
SEGI_02723 Sequoiadendron giganteum
SEGI_03852 Sequoiadendron giganteum
SEGI_06008 Sequoiadendron giganteum
SEGI_21285 Sequoiadendron giganteum
SEGI_28307 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11620 Striga asiatica
SMO134G0118 Selaginella moellendorffii
SMO367G1083 Selaginella moellendorffii
Solyc02g078240.4 Solanum lycopersicum
Solyc06g074510.4 Solanum lycopersicum
Sopen02g023100 Solanum pennellii
Sopen06g030990 Solanum pennellii
Sp6g22720 Schrenkiella parvula
TAR629G3039 Trochodendron aralioides
TAR633G1921 Trochodendron aralioides
THA.LOC104799537 Tarenaya hassleriana
THA.LOC104804986 Tarenaya hassleriana
Thecc.06G188100 Theobroma cacao
Thecc.09G291000 Theobroma cacao
Thhalv10013362m.g Eutrema salsugineum
TPR.G15587 Trifolium pratense
TPR.G16530 Trifolium pratense
TWI31G0687 Tripterygium wilfordii
TWI38G2293 Tripterygium wilfordii
unitig_747.g21955 Utricularia gibba
vmacro03867 Vaccinium macrocarpon
vmacro14358 Vaccinium macrocarpon
VMungo0540G1610 Vigna mungo
VMungo1127G1861 Vigna mungo
Zm00001eb196880 Zea mays
Zm00001eb339410 Zea mays

User provided reference genes

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