Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29950 Brassica napus
A03p28500 Brassica napus
A03p66720 Brassica napus
A08p23320 Brassica napus
Aa31LG2G9450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2895 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5276 Anthoceros agrestis
Actinidia01918 Actinidia chinensis
Actinidia05601 Actinidia chinensis
Actinidia11797 Actinidia chinensis
Actinidia39437 Actinidia chinensis
Ah.09g235890 Amaranthus hybridus
Ah.14g089110 Amaranthus hybridus
AL1G22090 Arabidopsis lyrata
AL2G15200 Arabidopsis lyrata
AL4G10480 Arabidopsis lyrata
Aqoxy1G01215 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7YHY0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DE500R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7ZFGF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YPH606 Arachis hypogaea
AT1G11110 Arabidopsis thaliana
AT1G61150 Arabidopsis thaliana
AT4G09300 Arabidopsis thaliana
ATR0693G300 Amborella trichopoda
Atru.chr10.1967 Acer truncatum
AUR62014760 Chenopodium quinoa
AUR62016939 Chenopodium quinoa
BcaB01g02796 Brassica carinata
BcaB04g20319 Brassica carinata
BcaC01g04725 Brassica carinata
BcaC02g10587 Brassica carinata
BcaC06g31837 Brassica carinata
BcaC09g49330 Brassica carinata
BolC1t03747H Brassica oleracea
BolC3t15754H Brassica oleracea
BolC4t24250H Brassica oleracea
BraA01t02811Z Brassica rapa
BraA01t02813Z Brassica rapa
BraA01t03125Z Brassica rapa
BraA05t19638Z Brassica rapa
BraA09t40740Z Brassica rapa
C01p37860 Brassica napus
C03p34450 Brassica napus
C04p27190 Brassica napus
CAN.G1398.5 Capsicum annuum
CAN.G289.31 Capsicum annuum
CANSAT35G0749 Cannabis sativa
CARHR011300 Cardamine hirsuta
CARHR051520 Cardamine hirsuta
Carub.0001s1067 Capsella rubella
Carub.0002s0401 Capsella rubella
Ca_00301_v3 Cicer arietinum L.
CBR_g3123 Chara braunii
Cc02_g12740 Coffea canephora
CDE05G3229 Ceratophyllum demersum
CDE11G1254 Ceratophyllum demersum
Cfa000388 Carpinus fangiana
Ciclev10016453m.g Citrus clementina
CiPaw.09G053600 Carya illinoinensis
CiPaw.10G045200 Carya illinoinensis
ClCG03G005670 Citrullus lanatus
COL.COLO4_09459 Corchorus olitorius
COL.COLO4_31533 Corchorus olitorius
Cre01.g029050 Chlamydomonas reinhardtii
CsaV3_1G011930 Cucumis sativus L.
CSS0015381 Camellia sinensis var. sinensis
DCAR_008058 Daucus carota
DCAR_028120 Daucus carota
Dinv39785 Davidia involucrata
Dinv40522 Davidia involucrata
Duzib160G0311 Durio zibethinus
Duzib192G1061 Durio zibethinus
Duzib235G0426 Durio zibethinus
ECA236G3980 Erigeron canadensis
EL10Ac8g20293 Beta vulgaris
Eucgr.E03361 Eucalyptus grandis
Eucgr.L02006 Eucalyptus grandis
FAN05G0739 Fragaria x ananassa
FAN09G3466 Fragaria x ananassa
FAN11G0405 Fragaria x ananassa
FAN14G4449 Fragaria x ananassa
FAN16G1046 Fragaria x ananassa
FAN21G3415 Fragaria x ananassa
FAN25G1011 Fragaria x ananassa
FvH4_3g04570 Fragaria vesca
FvH4_6g14210 Fragaria vesca
Glyma.13G243700 Glycine max
Glyma.15G070000 Glycine max
Gohir.A05G163100 Gossypium hirsutum
Gohir.A06G209600 Gossypium hirsutum
Gohir.A09G071500 Gossypium hirsutum
Gohir.A10G023000 Gossypium hirsutum
Gohir.D05G165900 Gossypium hirsutum
Gohir.D06G211400 Gossypium hirsutum
Gohir.D09G071300 Gossypium hirsutum
Gohir.D10G023800 Gossypium hirsutum
Gorai.006G086200 Gossypium raimondii
Gorai.009G171100 Gossypium raimondii
Gorai.010G254800 Gossypium raimondii
Gorai.011G024900 Gossypium raimondii
GSVIVG01006337001 Vitis vinifera
GSVIVG01006948001 Vitis vinifera
HanXRQChr04g0124041 Helianthus annuus
HanXRQChr09g0263961 Helianthus annuus
HanXRQChr17g0551441 Helianthus annuus
Haze_06537 Corylus avellana
Haze_06538 Corylus avellana
Hma1.2p1_0191F.1_g083360 Hydrangea macrophylla
Hma1.2p1_0835F.1_g225890 Hydrangea macrophylla
HPP92_004200 Vanilla planifolia
Hund23664 Selenicereus undatus
Lalb_Chr09g0327501 Lupinus albus
Lalb_Chr15g0089941 Lupinus albus
Lalb_Chr16g0383471 Lupinus albus
Lj2A283G69 Lonicera japonica
Lj4g0003707 Lotus japonicus
Lj4g0013515 Lotus japonicus
Lj6g0000484 Lotus japonicus
Lsat_1_v5_gn_1_105560 Lactuca sativa
Lsat_1_v5_gn_3_45641 Lactuca sativa
Lsat_1_v5_gn_7_19480 Lactuca sativa
Lsat_1_v5_gn_8_122720 Lactuca sativa
Lsat_1_v5_gn_8_122840 Lactuca sativa
Lsat_1_v5_gn_9_82520 Lactuca sativa
Manes.16G023600 Manihot esculenta
Manes.17G041500 Manihot esculenta
Mapoly0028s0043 Marchantia polymorpha
Mapoly0056s0045 Marchantia polymorpha
MCO03G350 Micromonas commoda
MD05G1322300 Malus domestica
MD10G1300300 Malus domestica
Medtr2g012810 Medicago truncatula
MELO3C002570.2 Cucumis melo
Migut.C00144 Erythranthe guttata
Migut.H01503 Erythranthe guttata
Migut.K00911 Erythranthe guttata
Migut.M01166 Erythranthe guttata
MSTRG.13189 Avicennia marina
MSTRG.14689 Avicennia marina
MSTRG.15901 Avicennia marina
MSTRG.7318 Avicennia marina
Nitab4.5_0001820g0100 Nicotiana tabacum
Nitab4.5_0001833g0040 Nicotiana tabacum
Nitab4.5_0007319g0040 Nicotiana tabacum
Nitab4.5_0009161g0010 Nicotiana tabacum
Nn1g03964 Nelumbo nucifera
Nn1g06685 Nelumbo nucifera
Oeu005070.1 Olea europaea
Oeu026005.1 Olea europaea
Oeu038239.1 Olea europaea
Os03g0235100 Oryza sativa ssp. japonica
Peaxi162Scf00031g00823 Petunia axillaris
Peaxi162Scf00137g00312 Petunia axillaris
PGR042G2462 Punica granatum
PGSC0003DMG400005209 Solanum tuberosum
PGSC0003DMG400022428 Solanum tuberosum
Phvul.006G189300 Phaseolus vulgaris
Potri.004G037600 Populus trichocarpa
Potri.011G046200 Populus trichocarpa
Pp3c10_21900 Physcomitrium patens
Pp3c23_14140 Physcomitrium patens
Pp3c24_60 Physcomitrium patens
PRCOL_00006222 Prasinoderma coloniale
Prupe.4G040500 Prunus persica
Psat1g206920 Pisum sativum
Psat2g072720 Pisum sativum
Psat2g072800 Pisum sativum
Psat6g091360 Pisum sativum
Psat6g175160 Pisum sativum
PSO210G5949 Papaver somniferum
PSO675G0818 Papaver somniferum
PSO832G0753 Papaver somniferum
QL05p037787 Quercus lobata
RcHm_v2.0_Chr5g0007491 Rosa chinensis
RcHm_v2.0_Chr5g0007511 Rosa chinensis
Rhsim02G0122100 Rhododendron simsii
Sabra04G0022800 Salix brachista
Sabra11G0032000 Salix brachista
SalBow7G0249 Salvia bowleyana
SalBow8G2983 Salvia bowleyana
SalBow8G4154 Salvia bowleyana
Sc05g0007930 Simmondsia chinensis
Sed0008882 Sechium edule
Sed0024235 Sechium edule
SEGI_29306 Sequoiadendron giganteum
SEGI_29981 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37656 Striga asiatica
SGA_v2.0_scaffold49G18285 Striga asiatica
SHI02105 Sapria himalayana
SMO364G0008 Selaginella moellendorffii
Solyc02g078700.3 Solanum lycopersicum
Solyc03g006580.3 Solanum lycopersicum
Sopen02g023550 Solanum pennellii
Sopen03g002580 Solanum pennellii
Sp2g03320 Schrenkiella parvula
SpUn0101_0020 Schrenkiella parvula
TAR624G0795 Trochodendron aralioides
TAR627G0927 Trochodendron aralioides
TAR629G2552 Trochodendron aralioides
THA.LOC104809559 Tarenaya hassleriana
THA.LOC104819139 Tarenaya hassleriana
Thecc.06G194400 Theobroma cacao
Thhalv10023660m.g Eutrema salsugineum
TPR.G36799 Trifolium pratense
TWI38G0522 Tripterygium wilfordii
TWI38G1717 Tripterygium wilfordii
TWI63G1607 Tripterygium wilfordii
unitig_22.g6744 Utricularia gibba
unitig_8.g3359 Utricularia gibba
vmacro05896 Vaccinium macrocarpon
vmacro15881 Vaccinium macrocarpon
VMungo0540G1555 Vigna mungo
Zm00001eb009960 Zea mays
Zm00001eb399240 Zea mays

User provided reference genes

Program Settings