Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p68130 Brassica napus
A10p02430 Brassica napus
Aa31LG1G9100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2239 Anthoceros agrestis
Actinidia26630 Actinidia chinensis
Actinidia28940 Actinidia chinensis
Actinidia28941 Actinidia chinensis
Ah.15g091330 Amaranthus hybridus
Ah.15g091340 Amaranthus hybridus
AL1G13510 Arabidopsis lyrata
AL4G33010 Arabidopsis lyrata
Aqoxy1G01021 Aquilegia oxysepala
Aqoxy1G01022 Aquilegia oxysepala
Aqoxy1G02976 Aquilegia oxysepala
Aqoxy3G01485 Aquilegia oxysepala
Aqoxy3G01613 Aquilegia oxysepala
Aqoxy3G02412 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P92TZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WY8M22 Arachis hypogaea
AT1G03910 Arabidopsis thaliana
AT2G36815 Arabidopsis thaliana
ATR0724G050 Amborella trichopoda
Atru.chr10.1911 Acer truncatum
Atru.chr10.2404 Acer truncatum
Atru.chr10.2405 Acer truncatum
Atru.chr8.1695 Acer truncatum
AUR62007182 Chenopodium quinoa
AUR62007183 Chenopodium quinoa
AUR62009153 Chenopodium quinoa
AUR62018820 Chenopodium quinoa
AUR62022073 Chenopodium quinoa
AUR62022074 Chenopodium quinoa
AUR62040188 Chenopodium quinoa
AUR62042696 Chenopodium quinoa
BcaC05g24486 Brassica carinata
BcaC07g42222 Brassica carinata
BcaNung00709 Brassica carinata
BcaNung06144 Brassica carinata
BolC5t29003H Brassica oleracea
BolC7t46608H Brassica oleracea
BolC8t52784H Brassica oleracea
BraA09t42148Z Brassica rapa
C05p02250 Brassica napus
C07p61860 Brassica napus
C08p52570 Brassica napus
CAN.G1459.3 Capsicum annuum
CAN.G1459.4 Capsicum annuum
CAN.G738.3 Capsicum annuum
CANSAT80G1311 Cannabis sativa
CARHR003240 Cardamine hirsuta
CARHR003250 Cardamine hirsuta
CARHR131200 Cardamine hirsuta
CARHR131220 Cardamine hirsuta
CARHR131270 Cardamine hirsuta
Carub.0001s0306 Capsella rubella
Carub.0004s1866 Capsella rubella
Ca_08942_v3 Cicer arietinum L.
CBR_g4119 Chara braunii
Cc00_g14960 Coffea canephora
Cc00_g14970 Coffea canephora
Cc04_g07780 Coffea canephora
Cc07_g17880 Coffea canephora
Cc10_g12700 Coffea canephora
CDE04G1328 Ceratophyllum demersum
CDE07G1466 Ceratophyllum demersum
Cfa016494 Carpinus fangiana
Cfa022090 Carpinus fangiana
Ciclev10011207m.g Citrus clementina
Ciclev10013400m.g Citrus clementina
CiPaw.10G002600 Carya illinoinensis
ClCG10G019590 Citrullus lanatus
COL.COLO4_17620 Corchorus olitorius
COL.COLO4_22264 Corchorus olitorius
COL.COLO4_36480 Corchorus olitorius
Cpa.g.sc5.120 Carica papaya
Cre09.g398650 Chlamydomonas reinhardtii
CsaV3_3G036590 Cucumis sativus L.
CSS0014862 Camellia sinensis var. sinensis
CSS0043785 Camellia sinensis var. sinensis
DCAR_020795 Daucus carota
Dinv35839 Davidia involucrata
Duzib093G1992 Durio zibethinus
ECA232G4074 Erigeron canadensis
ECA232G4802 Erigeron canadensis
ECA238G2918 Erigeron canadensis
EL10Ac3g06890 Beta vulgaris
EL10Ac7g16722 Beta vulgaris
Eucgr.D02277 Eucalyptus grandis
Eucgr.K02416 Eucalyptus grandis
FAN02G2003 Fragaria x ananassa
FAN05G3544 Fragaria x ananassa
FAN05G3981 Fragaria x ananassa
FAN05G5009 Fragaria x ananassa
FAN09G3561 Fragaria x ananassa
FAN14G2907 Fragaria x ananassa
FAN19G0600 Fragaria x ananassa
FAN19G3088 Fragaria x ananassa
FAN23G0551 Fragaria x ananassa
FAN23G2272 Fragaria x ananassa
FAN26G0867 Fragaria x ananassa
FAN26G2184 Fragaria x ananassa
FAN26G3432 Fragaria x ananassa
FAN28G1035 Fragaria x ananassa
FvH4_1g06450 Fragaria vesca
FvH4_6g17312 Fragaria vesca
Glyma.03G188600 Glycine max
Glyma.13G148300 Glycine max
Glyma.19G188800 Glycine max
Gohir.A04G067800 Gossypium hirsutum
Gohir.D04G106400 Gossypium hirsutum
Gorai.009G410400 Gossypium raimondii
GSVIVG01033725001 Vitis vinifera
HanXRQChr11g0325191 Helianthus annuus
Haze_19497 Corylus avellana
Hma1.2p1_0033F.1_g020920 Hydrangea macrophylla
Hma1.2p1_0033F.1_g020940 Hydrangea macrophylla
Hma1.2p1_0564F.1_g179130 Hydrangea macrophylla
Hma1.2p1_2596F.1_g325110 Hydrangea macrophylla
Hma1.2p1_2996F.1_g331470 Hydrangea macrophylla
HPP92_017793 Vanilla planifolia
Hund04098 Selenicereus undatus
Lalb_Chr21g0315291 Lupinus albus
Lalb_Chr25g0288761 Lupinus albus
Lj1g0005916 Lotus japonicus
Lj1P1240T21 Lonicera japonica
Lj2g0005784 Lotus japonicus
Lj3C1008T14 Lonicera japonica
Lj8P306T56 Lonicera japonica
Lsat_1_v5_gn_2_23140 Lactuca sativa
Manes.08G017200 Manihot esculenta
Mapoly0001s0156 Marchantia polymorpha
MD12G1102100 Malus domestica
MD12G1102200 Malus domestica
MD14G1096200 Malus domestica
Medtr0130s0060 Medicago truncatula
Medtr1g061860 Medicago truncatula
Medtr7g102700 Medicago truncatula
MELO3C009413.2 Cucumis melo
Migut.G00710 Erythranthe guttata
MSTRG.21603 Avicennia marina
Nitab4.5_0000883g0030 Nicotiana tabacum
Nitab4.5_0000883g0040 Nicotiana tabacum
Nitab4.5_0000883g0050 Nicotiana tabacum
Nitab4.5_0002027g0020 Nicotiana tabacum
Nitab4.5_0007768g0010 Nicotiana tabacum
Nitab4.5_0007768g0040 Nicotiana tabacum
Nitab4.5_0007768g0050 Nicotiana tabacum
Oeu005667.1 Olea europaea
Oeu026917.1 Olea europaea
Oeu027192.1 Olea europaea
Os03g0800100 Oryza sativa ssp. japonica
Os04g0558200 Oryza sativa ssp. japonica
Peaxi162Scf00732g00028 Petunia axillaris
Peaxi162Scf01089g10011 Petunia axillaris
PGR083G2067 Punica granatum
PGR142G4079 Punica granatum
PGSC0003DMG400040194 Solanum tuberosum
Phvul.001G184000 Phaseolus vulgaris
Potri.001G242900 Populus trichocarpa
Potri.006G118700 Populus trichocarpa
Pp3c27_420 Physcomitrium patens
PRCOL_00002534 Prasinoderma coloniale
Prupe.7G122300 Prunus persica
Psat3g037760 Pisum sativum
Psat6g078080 Pisum sativum
PSO210G0575 Papaver somniferum
PSO339G0841 Papaver somniferum
QL07p041296 Quercus lobata
QL10p005646 Quercus lobata
QL10p008780 Quercus lobata
RcHm_v2.0_Chr2g0092191 Rosa chinensis
RcHm_v2.0_Chr3g0471451 Rosa chinensis
RcHm_v2.0_Chr3g0471601 Rosa chinensis
RcHm_v2.0_Chr5g0072821 Rosa chinensis
Rhsim03G0079100 Rhododendron simsii
Rhsim03G0085500 Rhododendron simsii
Sabra06G0093300 Salix brachista
SalBow8G1467 Salvia bowleyana
SalBow8G3947 Salvia bowleyana
Sc01g0003900 Simmondsia chinensis
Sed0027110 Sechium edule
SEGI_06196 Sequoiadendron giganteum
SEGI_13117 Sequoiadendron giganteum
SEGI_24622 Sequoiadendron giganteum
SEGI_26849 Sequoiadendron giganteum
SEGI_27063 Sequoiadendron giganteum
SEGI_34935 Sequoiadendron giganteum
SGA_v2.0_scaffold312G48279 Striga asiatica
SHI27742 Sapria himalayana
SMO169G0108 Selaginella moellendorffii
SMO301G0016 Selaginella moellendorffii
SMO364G0478 Selaginella moellendorffii
SMO364G0524 Selaginella moellendorffii
Solyc10g085410.3 Solanum lycopersicum
Sopen10g034860 Solanum pennellii
Sp1g02770 Schrenkiella parvula
Sp4g05130 Schrenkiella parvula
TAR623G0013 Trochodendron aralioides
TAR636G1269 Trochodendron aralioides
THA.LOC104816364 Tarenaya hassleriana
Thecc.05G076300 Theobroma cacao
Thecc.06G013600 Theobroma cacao
Thecc.08G192100 Theobroma cacao
Thhalv10006994m.g Eutrema salsugineum
TPR.G27088 Trifolium pratense
TPR.G31678 Trifolium pratense
unitig_578.g16659 Utricularia gibba
vmacro07353 Vaccinium macrocarpon
VMungo0251G2561 Vigna mungo
VMungo0720G2588 Vigna mungo
VMungo1383G0302 Vigna mungo
Zm00001eb017020 Zea mays
Zm00001eb032700 Zea mays
Zm00001eb061170 Zea mays
Zm00001eb345920 Zea mays
Zm00001eb382350 Zea mays

User provided reference genes

Program Settings