Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p44530 Brassica napus
A03p48030 Brassica napus
A07p17510 Brassica napus
A09p09990 Brassica napus
A09p44030 Brassica napus
Aa31LG1G14970 Aethionema arabicum
Aa31LG4G19020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1624 Anthoceros agrestis
Actinidia19199 Actinidia chinensis
Actinidia35629 Actinidia chinensis
Ah.03g141130 Amaranthus hybridus
AL5G31280 Arabidopsis lyrata
AL8G45090 Arabidopsis lyrata
Aqoxy1G03993 Aquilegia oxysepala
Aqoxy1G03994 Aquilegia oxysepala
Aqoxy1G03996 Aquilegia oxysepala
Aqoxy1G03997 Aquilegia oxysepala
Aqoxy4G01844 Aquilegia oxysepala
Aqoxy6G01164 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.005S9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IPKV79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SCCL3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5PEZY Arachis hypogaea
AT3G50920 Arabidopsis thaliana
AT5G66450 Arabidopsis thaliana
ATR0568G217 Amborella trichopoda
Atru.chr3.630 Acer truncatum
AUR62004087 Chenopodium quinoa
AUR62004088 Chenopodium quinoa
AUR62007599 Chenopodium quinoa
AUR62007600 Chenopodium quinoa
BcaB02g10029 Brassica carinata
BcaB07g29666 Brassica carinata
BcaC03g15121 Brassica carinata
BcaC03g18414 Brassica carinata
BcaC03g18420 Brassica carinata
BcaC04g23127 Brassica carinata
BcaC06g33065 Brassica carinata
BcaC06g33068 Brassica carinata
BcaC06g33333 Brassica carinata
BcaC06g33334 Brassica carinata
BcaC06g34705 Brassica carinata
BcaC07g39560 Brassica carinata
BcaC09g50308 Brassica carinata
BcaC09g50309 Brassica carinata
BcaNung05718 Brassica carinata
BolC7t45122H Brassica oleracea
BolC8t49872H Brassica oleracea
BolC8t50231H Brassica oleracea
BraA03t13911Z Brassica rapa
BraA07t29471Z Brassica rapa
BraA09t39861Z Brassica rapa
C01p26790 Brassica napus
C02p49610 Brassica napus
C02p64930 Brassica napus
C07p25440 Brassica napus
C07p46040 Brassica napus
C07p46050 Brassica napus
C08p26130 Brassica napus
C08p26140 Brassica napus
C09p11850 Brassica napus
CAN.G358.47 Capsicum annuum
CAN.G358.48 Capsicum annuum
CAN.G53.3 Capsicum annuum
CAN.G53.4 Capsicum annuum
CANSAT01G2043 Cannabis sativa
CARHR160490 Cardamine hirsuta
CARHR281300 Cardamine hirsuta
Carub.0005s1731 Capsella rubella
Carub.0008s2807 Capsella rubella
Ca_22297_v3 Cicer arietinum L.
Ca_22327_v3 Cicer arietinum L.
Cc07_g09870 Coffea canephora
CDE06G2543 Ceratophyllum demersum
CDE11G1071 Ceratophyllum demersum
Cfa004341 Carpinus fangiana
Ciclev10026261m.g Citrus clementina
CiPaw.01G044800 Carya illinoinensis
CiPaw.01G045100 Carya illinoinensis
CiPaw.01G045400 Carya illinoinensis
CiPaw.01G045600 Carya illinoinensis
CiPaw.02G020200 Carya illinoinensis
ClCG01G019760 Citrullus lanatus
COL.COLO4_22036 Corchorus olitorius
Cpa.g.c32372 Carica papaya
Cre06.g295250 Chlamydomonas reinhardtii
CsaV3_6G046460 Cucumis sativus L.
CSS0016259 Camellia sinensis var. sinensis
CSS0035857 Camellia sinensis var. sinensis
DCAR_021484 Daucus carota
DCAR_025959 Daucus carota
Dinv13496 Davidia involucrata
Dinv40014 Davidia involucrata
Duzib187G1304 Durio zibethinus
Duzib264G0171 Durio zibethinus
EL10As8g23913 Beta vulgaris
Eucgr.H03322 Eucalyptus grandis
Eucgr.H03331 Eucalyptus grandis
FAN19G1139 Fragaria x ananassa
FAN23G2566 Fragaria x ananassa
FAN26G2828 Fragaria x ananassa
FAN28G2032 Fragaria x ananassa
FvH4_1g12790 Fragaria vesca
Glyma.01G171800 Glycine max
Glyma.11G071400 Glycine max
Gohir.A12G063500 Gossypium hirsutum
Gohir.D12G063300 Gossypium hirsutum
Gorai.008G066600 Gossypium raimondii
GSVIVG01018921001 Vitis vinifera
HanXRQChr14g0440521 Helianthus annuus
HanXRQChr16g0530661 Helianthus annuus
HanXRQChr16g0530671 Helianthus annuus
Haze_15060 Corylus avellana
Hma1.2p1_1297F.1_g274090 Hydrangea macrophylla
HPP92_013478 Vanilla planifolia
Hund13998 Selenicereus undatus
Lalb_Chr05g0212641 Lupinus albus
Lalb_Chr09g0322171 Lupinus albus
Lj2C456G10 Lonicera japonica
Lj2g0003092 Lotus japonicus
Lj4A205T21 Lonicera japonica
Lj4g0005388 Lotus japonicus
Lsat_1_v5_gn_2_77541 Lactuca sativa
Lsat_1_v5_gn_3_75940 Lactuca sativa
Manes.01G138300 Manihot esculenta
Manes.02G096600 Manihot esculenta
Mapoly0008s0040 Marchantia polymorpha
MCO15G090 Micromonas commoda
MD02G1143500 Malus domestica
MD15G1256700 Malus domestica
Medtr8g077115 Medicago truncatula
Medtr8g077120 Medicago truncatula
MELO3C007843.2 Cucumis melo
Migut.H02525 Erythranthe guttata
MSTRG.2483 Avicennia marina
Nitab4.5_0000136g0260 Nicotiana tabacum
Nitab4.5_0001617g0030 Nicotiana tabacum
Nitab4.5_0008397g0010 Nicotiana tabacum
Nn1g04916 Nelumbo nucifera
Nn1g04919 Nelumbo nucifera
Nn1g04920 Nelumbo nucifera
Oeu012901.1 Olea europaea
Oeu027431.1 Olea europaea
Oeu027432.1 Olea europaea
Os02g0704500 Oryza sativa ssp. japonica
Peaxi162Scf00008g03417 Petunia axillaris
Peaxi162Scf00366g00815 Petunia axillaris
Peaxi162Scf00366g00819 Petunia axillaris
PGR102G0163 Punica granatum
PGSC0003DMG400015511 Solanum tuberosum
PGSC0003DMG401003606 Solanum tuberosum
PGSC0003DMG402003606 Solanum tuberosum
Phvul.002G033600 Phaseolus vulgaris
Potri.005G120400 Populus trichocarpa
Potri.007G021600 Populus trichocarpa
PRCOL_00003536 Prasinoderma coloniale
Prupe.7G158200 Prunus persica
Psat4g094920 Pisum sativum
Psat4g094960 Pisum sativum
Psat7g022240 Pisum sativum
PSO339G2437 Papaver somniferum
PSO541G0707 Papaver somniferum
PSO541G4762 Papaver somniferum
PSO541G6245 Papaver somniferum
PSO675G6275 Papaver somniferum
PSO675G7033 Papaver somniferum
PSO675G8035 Papaver somniferum
QL06p047123 Quercus lobata
RcHm_v2.0_Chr2g0100911 Rosa chinensis
RcHm_v2.0_Chr2g0100921 Rosa chinensis
RcHm_v2.0_Chr2g0100931 Rosa chinensis
Rhsim08G0119800 Rhododendron simsii
Sabra05G0099200 Salix brachista
Sabra07G0018700 Salix brachista
SalBow1G1618 Salvia bowleyana
SalBow1G1785 Salvia bowleyana
SalBow1G2527 Salvia bowleyana
SalBow1G7215 Salvia bowleyana
SalBow1G7918 Salvia bowleyana
SalBow8G0597 Salvia bowleyana
SalBow8G4131 Salvia bowleyana
Sc03g0003130 Simmondsia chinensis
Sed0003710 Sechium edule
Sed0014839 Sechium edule
SEGI_19312 Sequoiadendron giganteum
SEGI_21712 Sequoiadendron giganteum
SEGI_25520 Sequoiadendron giganteum
SEGI_39357 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06312 Striga asiatica
SMO367G0089 Selaginella moellendorffii
Solyc02g062570.4 Solanum lycopersicum
Solyc02g062580.3 Solanum lycopersicum
Solyc02g084970.4 Solanum lycopersicum
Sopen00g011620 Solanum pennellii
Sopen02g013590 Solanum pennellii
Sopen02g013600 Solanum pennellii
Sopen02g029640 Solanum pennellii
Sp2g30280 Schrenkiella parvula
Sp5g11310 Schrenkiella parvula
TAR381G0836 Trochodendron aralioides
TAR628G0922 Trochodendron aralioides
THA.LOC104819202 Tarenaya hassleriana
THA.LOC104826672 Tarenaya hassleriana
Thecc.01G030700 Theobroma cacao
Thecc.01G031300 Theobroma cacao
Thhalv10004725m.g Eutrema salsugineum
Thhalv10010693m.g Eutrema salsugineum
TPR.G24094 Trifolium pratense
TPR.G24118 Trifolium pratense
TPR.G39284 Trifolium pratense
TWI09G0554 Tripterygium wilfordii
TWI09G1569 Tripterygium wilfordii
unitig_736.g22638 Utricularia gibba
vmacro17810 Vaccinium macrocarpon
vmacro19036 Vaccinium macrocarpon
VMungo1215G0425 Vigna mungo
Zm00001eb188310 Zea mays
Zm00001eb252000 Zea mays

User provided reference genes

Program Settings