Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p09730 Brassica napus
Aa31LG1G15400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1937 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1290 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1301 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1302 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1303 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1304 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1305 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1306 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1307 Anthoceros agrestis
Actinidia12061 Actinidia chinensis
Actinidia21804 Actinidia chinensis
Ah.02g124010 Amaranthus hybridus
Ah.02g128440 Amaranthus hybridus
Ah.02g128500 Amaranthus hybridus
AL8G44560 Arabidopsis lyrata
Aqoxy6G01414 Aquilegia oxysepala
Aqoxy7G00984 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4YD75G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8YD36W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5EU5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4D6S9 Arachis hypogaea
AT5G66840 Arabidopsis thaliana
ATR0681G266 Amborella trichopoda
ATR1133G034 Amborella trichopoda
ATR1133G040 Amborella trichopoda
Atru.chr1.4091 Acer truncatum
Atru.chr3.400 Acer truncatum
AUR62001440 Chenopodium quinoa
AUR62001955 Chenopodium quinoa
AUR62003852 Chenopodium quinoa
AUR62009925 Chenopodium quinoa
AUR62041920 Chenopodium quinoa
BcaB04g18751 Brassica carinata
BcaB04g20095 Brassica carinata
BcaC04g23165 Brassica carinata
BolC5t34589H Brassica oleracea
BolC9t54039H Brassica oleracea
BraA09t36620Z Brassica rapa
C09p11500 Brassica napus
CAN.G1743.6 Capsicum annuum
CAN.G744.10 Capsicum annuum
CAN.G836.63 Capsicum annuum
CANSAT01G0954 Cannabis sativa
CANSAT56G4392 Cannabis sativa
CARHR280830 Cardamine hirsuta
Carub.0008s2765 Capsella rubella
Ca_04807_v3 Cicer arietinum L.
Ca_24785_v3 Cicer arietinum L.
CBR_g12773 Chara braunii
CBR_g40083 Chara braunii
CBR_g51457 Chara braunii
Cc04_g01010 Coffea canephora
CDE05G1488 Ceratophyllum demersum
CDE11G0511 Ceratophyllum demersum
Ciclev10025568m.g Citrus clementina
Ciclev10025604m.g Citrus clementina
Ciclev10025792m.g Citrus clementina
Ciclev10027460m.g Citrus clementina
CiPaw.01G215300 Carya illinoinensis
ClCG02G013230 Citrullus lanatus
ClCG05G001240 Citrullus lanatus
ClCG09G001160 Citrullus lanatus
COL.COLO4_30808 Corchorus olitorius
COL.COLO4_37416 Corchorus olitorius
Cpa.g.sc25.152 Carica papaya
Cpa.g.sc25.154 Carica papaya
Cpa.g.sc6.382 Carica papaya
CsaV3_2G017280 Cucumis sativus L.
CsaV3_7G034230 Cucumis sativus L.
CSS0002964 Camellia sinensis var. sinensis
CSS0029766 Camellia sinensis var. sinensis
CSS0037213 Camellia sinensis var. sinensis
DCAR_010908 Daucus carota
DCAR_016105 Daucus carota
Dinv20407 Davidia involucrata
Dinv39877 Davidia involucrata
Duzib147G1352 Durio zibethinus
Duzib235G1234 Durio zibethinus
ECA232G3349 Erigeron canadensis
ECA232G3972 Erigeron canadensis
EL10Ac7g16447 Beta vulgaris
Eucgr.F02474 Eucalyptus grandis
FAN05G5623 Fragaria x ananassa
FAN09G1984 Fragaria x ananassa
FAN14G2660 Fragaria x ananassa
FAN23G2712 Fragaria x ananassa
FAN26G1358 Fragaria x ananassa
FAN26G2175 Fragaria x ananassa
FAN28G0557 Fragaria x ananassa
FvH4_1g15670 Fragaria vesca
FvH4_6g35210 Fragaria vesca
Glyma.01G184400 Glycine max
Glyma.07G042250 Glycine max
Glyma.11G057900 Glycine max
Glyma.16G010500 Glycine max
Gohir.A10G056300 Gossypium hirsutum
Gohir.A12G070100 Gossypium hirsutum
Gohir.D10G058200 Gossypium hirsutum
Gohir.D12G088700 Gossypium hirsutum
Gorai.008G074400 Gossypium raimondii
Gorai.011G062300 Gossypium raimondii
GSVIVG01006577001 Vitis vinifera
GSVIVG01016711001 Vitis vinifera
HanXRQChr14g0430641 Helianthus annuus
HanXRQChr14g0430661 Helianthus annuus
HanXRQChr15g0497171 Helianthus annuus
Haze_15430 Corylus avellana
Hma1.2p1_1415F.1_g281980 Hydrangea macrophylla
HPP92_004082 Vanilla planifolia
HPP92_004108 Vanilla planifolia
HPP92_026312 Vanilla planifolia
Hund13569 Selenicereus undatus
Lalb_Chr03g0041291 Lupinus albus
Lalb_Chr09g0323011 Lupinus albus
Lj2g0011618 Lotus japonicus
Lj3g0012768 Lotus japonicus
Lsat_1_v5_gn_4_167040 Lactuca sativa
Lsat_1_v5_gn_4_91360 Lactuca sativa
Manes.11G016000 Manihot esculenta
Manes.12G101900 Manihot esculenta
Mapoly0087s0059 Marchantia polymorpha
Mapoly0135s0035 Marchantia polymorpha
MD02G1168400 Malus domestica
MD09G1177700 Malus domestica
Medtr5g017820 Medicago truncatula
Medtr8g022220 Medicago truncatula
Medtr8g022240 Medicago truncatula
MELO3C020931.2 Cucumis melo
MELO3C024332.2 Cucumis melo
MELO3C027697.2 Cucumis melo
MELO3C029140.2 Cucumis melo
Migut.H00456 Erythranthe guttata
Migut.I01108 Erythranthe guttata
MSTRG.10930 Avicennia marina
Nitab4.5_0000083g0220 Nicotiana tabacum
Nitab4.5_0000278g0230 Nicotiana tabacum
Nitab4.5_0000310g0210 Nicotiana tabacum
Nitab4.5_0000440g0180 Nicotiana tabacum
Nitab4.5_0002792g0040 Nicotiana tabacum
Nitab4.5_0003137g0050 Nicotiana tabacum
Nitab4.5_0027818g0010 Nicotiana tabacum
Nn5g30189 Nelumbo nucifera
Nn6g35659 Nelumbo nucifera
Oeu005588.1 Olea europaea
Oeu012001.1 Olea europaea
Oeu012014.1 Olea europaea
Oeu021839.1 Olea europaea
Oeu024900.1 Olea europaea
Oeu061272.1 Olea europaea
Os07g0619700 Oryza sativa ssp. japonica
Os10g0391300 Oryza sativa ssp. japonica
Peaxi162Scf00207g01552 Petunia axillaris
Peaxi162Scf00916g00223 Petunia axillaris
PGR049G0005 Punica granatum
PGR049G0006 Punica granatum
PGR119G0325 Punica granatum
PGR119G0701 Punica granatum
PGR119G2494 Punica granatum
PGSC0003DMG400010058 Solanum tuberosum
PGSC0003DMG401004894 Solanum tuberosum
Phvul.002G020700 Phaseolus vulgaris
Phvul.010G125800 Phaseolus vulgaris
Potri.003G069700 Populus trichocarpa
Potri.005G136000 Populus trichocarpa
Pp3c24_14400 Physcomitrium patens
Prupe.3G037000 Prunus persica
Prupe.7G136600 Prunus persica
Psat2g165360 Pisum sativum
Psat4g166960 Pisum sativum
PSO104G0149 Papaver somniferum
PSO104G0224 Papaver somniferum
PSO210G4116 Papaver somniferum
PSO384G2166 Papaver somniferum
PSO421G0423 Papaver somniferum
PSO421G0455 Papaver somniferum
PSO541G2734 Papaver somniferum
PSO675G6917 Papaver somniferum
QL05p003308 Quercus lobata
QL06p042372 Quercus lobata
RcHm_v2.0_Chr2g0104981 Rosa chinensis
RcHm_v2.0_Chr2g0146551 Rosa chinensis
RcHm_v2.0_Chr6g0283061 Rosa chinensis
Rhsim08G0241500 Rhododendron simsii
Rhsim10G0119900 Rhododendron simsii
Sabra03G0041000 Salix brachista
Sabra05G0108800 Salix brachista
Sc15g0000640 Simmondsia chinensis
Sed0019220 Sechium edule
Sed0022478 Sechium edule
SEGI_15010 Sequoiadendron giganteum
SEGI_36428 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07260 Striga asiatica
SGA_v2.0_scaffold71G23884 Striga asiatica
Solyc02g090530.4 Solanum lycopersicum
Solyc06g063020.4 Solanum lycopersicum
Sopen02g035190 Solanum pennellii
Sopen06g022470 Solanum pennellii
Sp2g29820 Schrenkiella parvula
TAR381G1689 Trochodendron aralioides
TAR624G0191 Trochodendron aralioides
THA.LOC104827019 Tarenaya hassleriana
Thecc.01G052100 Theobroma cacao
Thecc.06G125300 Theobroma cacao
Thhalv10004096m.g Eutrema salsugineum
TPR.G16663 Trifolium pratense
TPR.G16675 Trifolium pratense
TPR.G31100 Trifolium pratense
TWI23G0931 Tripterygium wilfordii
TWI73G1278 Tripterygium wilfordii
vmacro05325 Vaccinium macrocarpon
vmacro15059 Vaccinium macrocarpon
vmacro15060 Vaccinium macrocarpon
VMungo0331G1342 Vigna mungo
VMungo0540G0607 Vigna mungo
VMungo1215G1060 Vigna mungo
Zm00001eb109490 Zea mays

User provided reference genes

Program Settings