Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p13000 Brassica napus
A08p13010 Brassica napus
A08p13070 Brassica napus
A08p13120 Brassica napus
Aa31LG6G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.388 Anthoceros agrestis
Actinidia01823 Actinidia chinensis
Actinidia02141 Actinidia chinensis
Actinidia10833 Actinidia chinensis
Actinidia14419 Actinidia chinensis
Actinidia14420 Actinidia chinensis
Actinidia27472 Actinidia chinensis
Actinidia27473 Actinidia chinensis
Actinidia28207 Actinidia chinensis
Actinidia28422 Actinidia chinensis
Actinidia31518 Actinidia chinensis
Actinidia31519 Actinidia chinensis
Actinidia31521 Actinidia chinensis
Ah.12g053640 Amaranthus hybridus
AL7G37390 Arabidopsis lyrata
Aqoxy7G00802 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.YK7683 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZLH3PG Arachis hypogaea
AT4G17330 Arabidopsis thaliana
ATR0317G002 Amborella trichopoda
Atru.chr9.1295 Acer truncatum
AUR62007092 Chenopodium quinoa
AUR62019955 Chenopodium quinoa
BcaC06g33544 Brassica carinata
BcaC07g38055 Brassica carinata
BcaC07g38056 Brassica carinata
BcaC07g38057 Brassica carinata
BcaC07g38061 Brassica carinata
BcaC07g38062 Brassica carinata
BcaNung00101 Brassica carinata
BolC8t48450H Brassica oleracea
BolC8t48451H Brassica oleracea
BolC8t48452H Brassica oleracea
BolC8t48453H Brassica oleracea
BolC8t48454H Brassica oleracea
BolC8t48461H Brassica oleracea
BolC8t48462H Brassica oleracea
BraA08t33284Z Brassica rapa
BraA08t33285Z Brassica rapa
BraA08t33288Z Brassica rapa
BraA08t33289Z Brassica rapa
CAN.G1058.41 Capsicum annuum
CANSAT21G0191 Cannabis sativa
CARHR223940 Cardamine hirsuta
Carub.0007s2408 Capsella rubella
Ca_21973_v3 Cicer arietinum L.
Ca_24583_v3 Cicer arietinum L.
Cc04_g13450 Coffea canephora
Cc08_g12310 Coffea canephora
CDE02G1173 Ceratophyllum demersum
CDE04G1375 Ceratophyllum demersum
Ciclev10018443m.g Citrus clementina
CiPaw.11G080100 Carya illinoinensis
CiPaw.11G080200 Carya illinoinensis
CiPaw.12G051500 Carya illinoinensis
ClCG10G002580 Citrullus lanatus
COL.COLO4_17037 Corchorus olitorius
COL.COLO4_37160 Corchorus olitorius
COL.COLO4_37161 Corchorus olitorius
Cpa.g.sc29.172 Carica papaya
Cpa.g.sc29.173 Carica papaya
Cre08.g386000 Chlamydomonas reinhardtii
CsaV3_3G002610 Cucumis sativus L.
CSS0026981 Camellia sinensis var. sinensis
CSS0046148 Camellia sinensis var. sinensis
CSS0047611 Camellia sinensis var. sinensis
DCAR_004959 Daucus carota
DCAR_006836 Daucus carota
DCAR_008496 Daucus carota
DCAR_027770 Daucus carota
Dinv21645 Davidia involucrata
Dinv39155 Davidia involucrata
Duzib068G0714 Durio zibethinus
Duzib205G1689 Durio zibethinus
ECA233G3821 Erigeron canadensis
ECA240G2052 Erigeron canadensis
ECA240G3943 Erigeron canadensis
EL10Ac5g12387 Beta vulgaris
Eucgr.D02089 Eucalyptus grandis
FAN04G0074 Fragaria x ananassa
FAN08G3437 Fragaria x ananassa
FAN13G0222 Fragaria x ananassa
FAN18G0989 Fragaria x ananassa
FvH4_5g19090 Fragaria vesca
Glyma.01G208600 Glycine max
Glyma.05G060300 Glycine max
Glyma.11G033600 Glycine max
Gohir.A08G169600 Gossypium hirsutum
Gohir.A11G027000 Gossypium hirsutum
Gohir.A12G216300 Gossypium hirsutum
Gohir.A12G216333 Gossypium hirsutum
Gohir.A12G216366 Gossypium hirsutum
Gohir.D08G187900 Gossypium hirsutum
Gohir.D11G026200 Gossypium hirsutum
Gohir.D12G218900 Gossypium hirsutum
Gorai.004G197800 Gossypium raimondii
Gorai.007G028500 Gossypium raimondii
Gorai.008G234500 Gossypium raimondii
GSVIVG01001959001 Vitis vinifera
GSVIVG01004716001 Vitis vinifera
GSVIVG01006991001 Vitis vinifera
GSVIVG01010774001 Vitis vinifera
GSVIVG01010786001 Vitis vinifera
HanXRQChr03g0087821 Helianthus annuus
HanXRQChr16g0510701 Helianthus annuus
HanXRQChr17g0549311 Helianthus annuus
Haze_07903 Corylus avellana
Hma1.2p1_0316F.1_g123020 Hydrangea macrophylla
HPP92_022418 Vanilla planifolia
HPP92_022419 Vanilla planifolia
Hund11601 Selenicereus undatus
Hund14553 Selenicereus undatus
Lalb_Chr05g0214411 Lupinus albus
Lalb_Chr05g0221221 Lupinus albus
Lalb_Chr09g0330011 Lupinus albus
Lj2C219G10 Lonicera japonica
Lj2g0024874 Lotus japonicus
Lj4g0011011 Lotus japonicus
Lj8A264T56 Lonicera japonica
Lsat_1_v5_gn_6_90740 Lactuca sativa
Lsat_1_v5_gn_9_68780 Lactuca sativa
Manes.01G081400 Manihot esculenta
Manes.02G040600 Manihot esculenta
Mapoly0052s0086 Marchantia polymorpha
Mapoly0091s0090 Marchantia polymorpha
MBI04_g09516_MAGBIO Magnolia biondii
MD04G1062800 Malus domestica
MD06G1057100 Malus domestica
Medtr4g100800 Medicago truncatula
Medtr5g012780 Medicago truncatula
MELO3C013931.2 Cucumis melo
Migut.A01111 Erythranthe guttata
MSTRG.12108 Avicennia marina
MSTRG.25519 Avicennia marina
Nitab4.5_0001381g0110 Nicotiana tabacum
Nitab4.5_0002289g0020 Nicotiana tabacum
Nn1g00964 Nelumbo nucifera
Nn6g33922 Nelumbo nucifera
Oeu019602.2 Olea europaea
Oeu020432.4 Olea europaea
Os10g0559600 Oryza sativa ssp. japonica
Os10g0559700 Oryza sativa ssp. japonica
Peaxi162Scf00209g00005 Petunia axillaris
PGR042G4011 Punica granatum
PGSC0003DMG400004819 Solanum tuberosum
Phvul.002G057800 Phaseolus vulgaris
Phvul.003G221300 Phaseolus vulgaris
Potri.001G157300 Populus trichocarpa
Potri.003G077600 Populus trichocarpa
Pp3c20_13300 Physcomitrium patens
Pp3c20_13303 Physcomitrium patens
Pp3c20_5200 Physcomitrium patens
Pp3c23_3470 Physcomitrium patens
Prupe.5G068000 Prunus persica
Psat2g028120 Pisum sativum
Psat2g028160 Pisum sativum
Psat2g031000 Pisum sativum
Psat2g177640 Pisum sativum
Psat4g072560 Pisum sativum
Psat4g076880 Pisum sativum
Psat4g091200 Pisum sativum
Psat4g091400 Pisum sativum
Psat6g227520 Pisum sativum
PSO017G2158 Papaver somniferum
PSO017G3860 Papaver somniferum
PSO170G6315 Papaver somniferum
PSO478G1324 Papaver somniferum
QL12p011773 Quercus lobata
QL12p011944 Quercus lobata
RcHm_v2.0_Chr7g0203541 Rosa chinensis
Sabra01G0134100 Salix brachista
Sabra03G0047900 Salix brachista
SalBow6G4258 Salvia bowleyana
Sc07g0009290 Simmondsia chinensis
Sc22g0000930 Simmondsia chinensis
Sed0019628 Sechium edule
SEGI_09106 Sequoiadendron giganteum
SEGI_11834 Sequoiadendron giganteum
SEGI_18879 Sequoiadendron giganteum
SEGI_19130 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30161 Striga asiatica
SGA_v2.0_scaffold199G41175 Striga asiatica
SHI20296 Sapria himalayana
SHI20297 Sapria himalayana
SMO141G0126 Selaginella moellendorffii
SMO201G0160 Selaginella moellendorffii
Solyc08g078530.4 Solanum lycopersicum
Sopen08g027010 Solanum pennellii
Sp7g16850 Schrenkiella parvula
TAR374G0926 Trochodendron aralioides
TAR375G1127 Trochodendron aralioides
TAR629G2174 Trochodendron aralioides
TAR629G2689 Trochodendron aralioides
TAR636G0976 Trochodendron aralioides
THA.LOC104806728 Tarenaya hassleriana
Thecc.03G249800 Theobroma cacao
Thhalv10024186m.g Eutrema salsugineum
TPR.G18122 Trifolium pratense
TPR.G37647 Trifolium pratense
TPR.G40719 Trifolium pratense
TWI15G0894 Tripterygium wilfordii
TWI81G0497 Tripterygium wilfordii
unitig_21.g20317 Utricularia gibba
unitig_744.g24473 Utricularia gibba
vmacro00195 Vaccinium macrocarpon
vmacro10681 Vaccinium macrocarpon
vmacro14077 Vaccinium macrocarpon
vmacro22443 Vaccinium macrocarpon
VMungo0251G2467 Vigna mungo
VMungo0251G3034 Vigna mungo
VMungo1215G1426 Vigna mungo
Zm00001eb023270 Zea mays
Zm00001eb391270 Zea mays

User provided reference genes

Program Settings