Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18130 Brassica napus
A04p09900 Brassica napus
A09p32320 Brassica napus
Aa31LG5G17560 Aethionema arabicum
Aa31LG5G4220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2028 Anthoceros agrestis
Actinidia11210 Actinidia chinensis
Actinidia32508 Actinidia chinensis
Ah.14g086720 Amaranthus hybridus
AL4G27690 Arabidopsis lyrata
AL7G44570 Arabidopsis lyrata
Aqoxy7G03817 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0B2HSD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2E7M4N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CFF83F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D87ERS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HIPE1N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JTAW3T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U40R6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VG7JT5 Arachis hypogaea
AT2G32295 Arabidopsis thaliana
AT5G35730 Arabidopsis thaliana
ATR0787G213 Amborella trichopoda
Atru.chr5.388 Acer truncatum
Atru.chr6.3141 Acer truncatum
AUR62027561 Chenopodium quinoa
AUR62035796 Chenopodium quinoa
BcaB01g03986 Brassica carinata
BcaB06g26976 Brassica carinata
BcaC01g01866 Brassica carinata
BcaC01g05910 Brassica carinata
BcaC02g09490 Brassica carinata
BolC3t14499H Brassica oleracea
BolC4t25916H Brassica oleracea
BolC4t27622H Brassica oleracea
BolC5t32375H Brassica oleracea
BolC8t51600H Brassica oleracea
BolC9t57445H Brassica oleracea
BolC9t58292H Brassica oleracea
BolC9t58293H Brassica oleracea
BraA02t06351Z Brassica rapa
BraA03t11072Z Brassica rapa
BraA03t13076Z Brassica rapa
BraA04t16653Z Brassica rapa
C02p21320 Brassica napus
C03p21160 Brassica napus
C04p43380 Brassica napus
C04p61380 Brassica napus
C08p40320 Brassica napus
C08p43710 Brassica napus
C09p54190 Brassica napus
CAN.G1126.28 Capsicum annuum
CAN.G655.3 Capsicum annuum
CAN.G655.4 Capsicum annuum
CANSAT64G2088 Cannabis sativa
CARHR126140 Cardamine hirsuta
CARHR216920 Cardamine hirsuta
Carub.0004s1367 Capsella rubella
Carub.0007s3147 Capsella rubella
Ca_01575_v3 Cicer arietinum L.
Ca_01576_v3 Cicer arietinum L.
Cc10_g03200 Coffea canephora
CDE02G0387 Ceratophyllum demersum
CDE09G0481 Ceratophyllum demersum
Cfa014440 Carpinus fangiana
Ciclev10015128m.g Citrus clementina
Ciclev10020261m.g Citrus clementina
CiPaw.03G163200 Carya illinoinensis
CiPaw.04G118000 Carya illinoinensis
ClCG04G004390 Citrullus lanatus
COL.COLO4_12634 Corchorus olitorius
COL.COLO4_12992 Corchorus olitorius
Cpa.g.sc8.238 Carica papaya
Cre01.g026400 Chlamydomonas reinhardtii
CsaV3_4G029720 Cucumis sativus L.
CSS0004570 Camellia sinensis var. sinensis
CSS0047433 Camellia sinensis var. sinensis
DCAR_009427 Daucus carota
DCAR_009428 Daucus carota
DCAR_020205 Daucus carota
Dinv15027 Davidia involucrata
Dinv15028 Davidia involucrata
Dinv39684 Davidia involucrata
Duzib132G0891 Durio zibethinus
Duzib133G1508 Durio zibethinus
Duzib138G0678 Durio zibethinus
ECA233G5037 Erigeron canadensis
EL10Ac8g19786 Beta vulgaris
Eucgr.K00863 Eucalyptus grandis
FAN02G1637 Fragaria x ananassa
FAN05G0260 Fragaria x ananassa
FAN07G0373 Fragaria x ananassa
FAN08G1693 Fragaria x ananassa
FAN09G4236 Fragaria x ananassa
FAN12G2421 Fragaria x ananassa
FAN14G4002 Fragaria x ananassa
FvH4_4g13681 Fragaria vesca
FvH4_4g13682 Fragaria vesca
FvH4_6g43560 Fragaria vesca
Glyma.09G263700 Glycine max
Glyma.11G206000 Glycine max
Glyma.12G196001 Glycine max
Glyma.13G306500 Glycine max
Glyma.18G228400 Glycine max
Gohir.A01G013400 Gossypium hirsutum
Gohir.A11G084600 Gossypium hirsutum
Gohir.A12G103350 Gossypium hirsutum
Gohir.D01G014700 Gossypium hirsutum
Gohir.D11G088700 Gossypium hirsutum
Gohir.D12G106800 Gossypium hirsutum
Gorai.002G016400 Gossypium raimondii
Gorai.007G094800 Gossypium raimondii
Gorai.008G116200 Gossypium raimondii
GSVIVG01030627001 Vitis vinifera
HanXRQChr10g0279151 Helianthus annuus
HanXRQChr17g0560951 Helianthus annuus
Haze_12901 Corylus avellana
Hma1.2p1_0613F.1_g189210 Hydrangea macrophylla
HPP92_010507 Vanilla planifolia
Hund21479 Selenicereus undatus
Lalb_Chr01g0005541 Lupinus albus
Lalb_Chr01g0005551 Lupinus albus
Lalb_Chr01g0021071 Lupinus albus
Lalb_Chr24g0393061 Lupinus albus
Lj1g0004776 Lotus japonicus
Lj3g0011099 Lotus japonicus
Lj8A37T39 Lonicera japonica
Lj8C37T5 Lonicera japonica
Lsat_1_v5_gn_8_129381 Lactuca sativa
Manes.13G073300 Manihot esculenta
Mapoly0008s0085 Marchantia polymorpha
Mapoly0060s0006 Marchantia polymorpha
MBI11_g02542_MAGBIO Magnolia biondii
MBI11_g02543_MAGBIO Magnolia biondii
MBI13_g32436_MAGBIO Magnolia biondii
MCO07G031 Micromonas commoda
MD09G1104800 Malus domestica
MD17G1092500 Malus domestica
Medtr2g088870 Medicago truncatula
Medtr7g076560 Medicago truncatula
MELO3C019066.2 Cucumis melo
Migut.C00698 Erythranthe guttata
MSTRG.25153 Avicennia marina
Nitab4.5_0000110g0420 Nicotiana tabacum
Nitab4.5_0003246g0110 Nicotiana tabacum
Nn4g22018 Nelumbo nucifera
Nn6g34282 Nelumbo nucifera
Nn7g38434 Nelumbo nucifera
Oeu016738.1 Olea europaea
Os12g0595000 Oryza sativa ssp. japonica
Peaxi162Scf00057g00421 Petunia axillaris
PGR042G2833 Punica granatum
PGSC0003DMG400031494 Solanum tuberosum
PGSC0003DMG402027860 Solanum tuberosum
Phvul.005G113400 Phaseolus vulgaris
Phvul.008G069800 Phaseolus vulgaris
Potri.007G121400 Populus trichocarpa
Potri.017G039000 Populus trichocarpa
Pp3c15_24780 Physcomitrium patens
Pp3c9_25080 Physcomitrium patens
Prupe.2G153500 Prunus persica
Prupe.3G220700 Prunus persica
Psat3g112160 Pisum sativum
Psat5g265400 Pisum sativum
PSO017G4371 Papaver somniferum
PSO170G4486 Papaver somniferum
PSO478G0397 Papaver somniferum
PSO478G0754 Papaver somniferum
PSO478G2450 Papaver somniferum
PSO478G2847 Papaver somniferum
PSO478G2953 Papaver somniferum
PSO478G4699 Papaver somniferum
PSO478G4750 Papaver somniferum
PSO478G5260 Papaver somniferum
PSO541G4219 Papaver somniferum
PSO782G4462 Papaver somniferum
PSO782G4988 Papaver somniferum
QL08p033861 Quercus lobata
RcHm_v2.0_Chr1g0326611 Rosa chinensis
RcHm_v2.0_Chr1g0352051 Rosa chinensis
RcHm_v2.0_Chr2g0127371 Rosa chinensis
RcHm_v2.0_Chr2g0160141 Rosa chinensis
Rhsim07G0131000 Rhododendron simsii
Sabra17G0026100 Salix brachista
SalBow6G6965 Salvia bowleyana
SalBow7G2186 Salvia bowleyana
Sc21g0001670 Simmondsia chinensis
Sed0002741 Sechium edule
SEGI_08676 Sequoiadendron giganteum
SEGI_18577 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10245 Striga asiatica
SGA_v2.0_scaffold48G18065 Striga asiatica
SHI10274 Sapria himalayana
SHI10275 Sapria himalayana
SMO367G1117 Selaginella moellendorffii
Solyc04g080050.4 Solanum lycopersicum
Solyc07g022830.3 Solanum lycopersicum
Sopen04g033640 Solanum pennellii
Sopen07g012160 Solanum pennellii
Sp4g14700 Schrenkiella parvula
Sp7g06520 Schrenkiella parvula
TAR365G0865 Trochodendron aralioides
THA.LOC104800980 Tarenaya hassleriana
THA.LOC104802010 Tarenaya hassleriana
THA.LOC104827598 Tarenaya hassleriana
Thecc.01G369700 Theobroma cacao
Thecc.02G162600 Theobroma cacao
Thhalv10004243m.g Eutrema salsugineum
Thhalv10016614m.g Eutrema salsugineum
TPR.G4191 Trifolium pratense
TWI18G1074 Tripterygium wilfordii
TWI75G1854 Tripterygium wilfordii
vmacro14192 Vaccinium macrocarpon
VMungo0251G3441 Vigna mungo
VMungo1080G0481 Vigna mungo
VMungo1383G1713 Vigna mungo
Zm00001eb030710 Zea mays
Zm00001eb135290 Zea mays

User provided reference genes

Program Settings