Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00710 Brassica napus
A07p25910 Brassica napus
Aa31LG10G16180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1657 Anthoceros agrestis
Actinidia06390 Actinidia chinensis
Actinidia21356 Actinidia chinensis
Actinidia35493 Actinidia chinensis
Ah.06g196330 Amaranthus hybridus
Ah.11g045790 Amaranthus hybridus
AL4G46630 Arabidopsis lyrata
AL5G44980 Arabidopsis lyrata
Aqoxy2G02557 Aquilegia oxysepala
Aqoxy329s001 Aquilegia oxysepala
Aqoxy329s002 Aquilegia oxysepala
Aqoxy329s003 Aquilegia oxysepala
Aqoxy329s004 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3N4E8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3UY4XW Arachis hypogaea
AT2G47090 Arabidopsis thaliana
AT3G62240 Arabidopsis thaliana
ATR0693G331 Amborella trichopoda
Atru.chr5.904 Acer truncatum
AUR62000461 Chenopodium quinoa
AUR62011734 Chenopodium quinoa
AUR62024567 Chenopodium quinoa
BcaB02g07343 Brassica carinata
BcaB02g07344 Brassica carinata
BcaB02g07345 Brassica carinata
BcaB02g08802 Brassica carinata
BcaC02g12595 Brassica carinata
BcaC08g45188 Brassica carinata
BolC4t21714H Brassica oleracea
BolC6t37982H Brassica oleracea
BraA07t30238Z Brassica rapa
C04p00850 Brassica napus
C06p28160 Brassica napus
CAN.G179.41 Capsicum annuum
CANSAT35G1199 Cannabis sativa
CANSAT54G2960 Cannabis sativa
CARHR142470 Cardamine hirsuta
CARHR172570 Cardamine hirsuta
Carub.0004s2983 Capsella rubella
Carub.0005s2896 Capsella rubella
Ca_09235_v3 Cicer arietinum L.
CBR_g4019 Chara braunii
Cc01_g21900 Coffea canephora
CDE08G0964 Ceratophyllum demersum
Cfa004879 Carpinus fangiana
Ciclev10018861m.g Citrus clementina
CiPaw.07G123400 Carya illinoinensis
CiPaw.08G084600 Carya illinoinensis
ClCG09G004660 Citrullus lanatus
COL.COLO4_05504 Corchorus olitorius
COL.COLO4_23158 Corchorus olitorius
Cpa.g.sc67.79 Carica papaya
Cre12.g528400 Chlamydomonas reinhardtii
Cre17.g696300 Chlamydomonas reinhardtii
CsaV3_7G030450 Cucumis sativus L.
CSS0015575 Camellia sinensis var. sinensis
CSS0032679 Camellia sinensis var. sinensis
CSS0033262 Camellia sinensis var. sinensis
CSS0034600 Camellia sinensis var. sinensis
CSS0040158 Camellia sinensis var. sinensis
CSS0044264 Camellia sinensis var. sinensis
CSS0046768 Camellia sinensis var. sinensis
DCAR_001894 Daucus carota
DCAR_005729 Daucus carota
Dinv12100 Davidia involucrata
Dinv30935 Davidia involucrata
Duzib133G0059 Durio zibethinus
Duzib138G1355 Durio zibethinus
Duzib177G0590 Durio zibethinus
ECA246G1933 Erigeron canadensis
ECA247G2356 Erigeron canadensis
ECA248G3457 Erigeron canadensis
EL10Ac2g03325 Beta vulgaris
EL10Ac4g09540 Beta vulgaris
EL10As5g23580 Beta vulgaris
Eucgr.K00591 Eucalyptus grandis
FAN01G0053 Fragaria x ananassa
FAN02G0529 Fragaria x ananassa
FAN03G0588 Fragaria x ananassa
FAN05G2780 Fragaria x ananassa
FAN06G2586 Fragaria x ananassa
FAN09G0203 Fragaria x ananassa
FAN10G2106 Fragaria x ananassa
FAN11G1698 Fragaria x ananassa
FAN14G2912 Fragaria x ananassa
FAN16G2453 Fragaria x ananassa
FAN16G3343 Fragaria x ananassa
FAN21G2521 Fragaria x ananassa
FAN25G1741 Fragaria x ananassa
FAN25G2518 Fragaria x ananassa
FvH4_3g07600 Fragaria vesca
FvH4_6g08350 Fragaria vesca
FvH4_7g03760 Fragaria vesca
Glyma.03G222900 Glycine max
Glyma.19G220000 Glycine max
Gohir.A08G121050 Gossypium hirsutum
Gohir.A11G106550 Gossypium hirsutum
Gohir.A11G275200 Gossypium hirsutum
Gohir.A12G121400 Gossypium hirsutum
Gohir.D08G142350 Gossypium hirsutum
Gohir.D11G111500 Gossypium hirsutum
Gohir.D11G285600 Gossypium hirsutum
Gohir.D12G125100 Gossypium hirsutum
Gorai.004G146700 Gossypium raimondii
Gorai.007G119400 Gossypium raimondii
Gorai.007G308800 Gossypium raimondii
Gorai.008G136100 Gossypium raimondii
GSVIVG01028201001 Vitis vinifera
HanXRQChr10g0285601 Helianthus annuus
HanXRQChr15g0464391 Helianthus annuus
Haze_04003 Corylus avellana
Haze_05118 Corylus avellana
Hma1.2p1_0686F.1_g203330 Hydrangea macrophylla
HPP92_002693 Vanilla planifolia
HPP92_013509 Vanilla planifolia
HPP92_013510 Vanilla planifolia
Hund09694 Selenicereus undatus
Hund27715 Selenicereus undatus
Hund27719 Selenicereus undatus
Lalb_Chr04g0260111 Lupinus albus
Lalb_Chr04g0260121 Lupinus albus
Lalb_Chr06g0167071 Lupinus albus
Lalb_Chr06g0167081 Lupinus albus
Lalb_Chr15g0077921 Lupinus albus
Lalb_Chr18g0046491 Lupinus albus
Lj1g0020409 Lotus japonicus
Lj2C1213G0 Lonicera japonica
Lju99C8T1 Lonicera japonica
Lsat_1_v5_gn_9_6521 Lactuca sativa
Manes.05G010800 Manihot esculenta
Manes.09G180200 Manihot esculenta
Mapoly0106s0017 Marchantia polymorpha
MBI02_g34310_MAGBIO Magnolia biondii
MBI18_g09618_MAGBIO Magnolia biondii
MCO13G180 Micromonas commoda
MD02G1277600 Malus domestica
MD04G1187900 Malus domestica
MD07G1045700 Malus domestica
Medtr7g110170 Medicago truncatula
MELO3C023608.2 Cucumis melo
Migut.D00028 Erythranthe guttata
MSTRG.21725 Avicennia marina
Nitab4.5_0001029g0060 Nicotiana tabacum
Nn2g12921 Nelumbo nucifera
Nn3g21882 Nelumbo nucifera
Nn4g25407 Nelumbo nucifera
Nn5g30899 Nelumbo nucifera
Oeu002574.1 Olea europaea
Oeu009105.2 Olea europaea
Oeu038063.1 Olea europaea
Os01g0251200 Oryza sativa ssp. japonica
Os05g0279400 Oryza sativa ssp. japonica
Peaxi162Scf00309g00121 Petunia axillaris
PGR142G2717 Punica granatum
PGSC0003DMG400017959 Solanum tuberosum
Phvul.001G216400 Phaseolus vulgaris
Potri.002G189700 Populus trichocarpa
Potri.005G004600 Populus trichocarpa
Potri.013G004200 Populus trichocarpa
Potri.014G114900 Populus trichocarpa
Pp3c19_13370 Physcomitrium patens
PRCOL_00003481 Prasinoderma coloniale
Prupe.2G042900 Prunus persica
Prupe.6G306300 Prunus persica
Psat3g017600 Pisum sativum
PSO210G0090 Papaver somniferum
PSO761G0237 Papaver somniferum
QL03p009619 Quercus lobata
QL12p034332 Quercus lobata
QL93p2005_0002 Quercus lobata
RcHm_v2.0_Chr1g0326951 Rosa chinensis
RcHm_v2.0_Chr3g0458251 Rosa chinensis
RcHm_v2.0_Chr5g0011091 Rosa chinensis
Rhsim11G0100200 Rhododendron simsii
Rhsim13G0000900 Rhododendron simsii
Sabra02G0166100 Salix brachista
Sabra08G0075200 Salix brachista
Sabra13G0003400 Salix brachista
Sabra14G0085000 Salix brachista
SalBow6G6137 Salvia bowleyana
Sc17g0000160 Simmondsia chinensis
Sed0000670 Sechium edule
Sed0004994 Sechium edule
SEGI_15107 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25692 Striga asiatica
SHI31903 Sapria himalayana
SHI31904 Sapria himalayana
SMO367G0009 Selaginella moellendorffii
SMO367G1085 Selaginella moellendorffii
Solyc01g068390.3 Solanum lycopersicum
Sopen01g030350 Solanum pennellii
Sp4g29080 Schrenkiella parvula
Sp5g01150 Schrenkiella parvula
TAR365G0210 Trochodendron aralioides
TAR365G0734 Trochodendron aralioides
TAR633G0221 Trochodendron aralioides
THA.LOC104802129 Tarenaya hassleriana
THA.LOC104827656 Tarenaya hassleriana
Thecc.01G322400 Theobroma cacao
Thecc.05G328100 Theobroma cacao
Thhalv10001330m.g Eutrema salsugineum
Thhalv10005791m.g Eutrema salsugineum
TPR.G4074 Trifolium pratense
TWI14G1445 Tripterygium wilfordii
TWI59G0671 Tripterygium wilfordii
unitig_0.g290 Utricularia gibba
vmacro01614 Vaccinium macrocarpon
vmacro01615 Vaccinium macrocarpon
vmacro02370 Vaccinium macrocarpon
VMungo1127G0011 Vigna mungo
VMungo1383G3057 Vigna mungo
Zm00001eb007030 Zea mays
Zm00001eb401260 Zea mays
Zm00001eb401270 Zea mays
Zm00001eb401280 Zea mays

User provided reference genes

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