Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14980 Brassica napus
A07p32020 Brassica napus
A07p33710 Brassica napus
A07p34840 Brassica napus
A10p22860 Brassica napus
Aa31LG11G13410 Aethionema arabicum
Aa31LG2G3400 Aethionema arabicum
Aa31LG4G14620 Aethionema arabicum
Actinidia04712 Actinidia chinensis
Actinidia17642 Actinidia chinensis
Ah.10g037670 Amaranthus hybridus
Ah.16g101650 Amaranthus hybridus
AL2G25140 Arabidopsis lyrata
AL2G27290 Arabidopsis lyrata
AL6G27080 Arabidopsis lyrata
Aqoxy3G00216 Aquilegia oxysepala
AT1G66890 Arabidopsis thaliana
AT1G68430 Arabidopsis thaliana
AT5G16200 Arabidopsis thaliana
ATR1125G046 Amborella trichopoda
Atru.chr1.1630 Acer truncatum
Atru.chr11.184 Acer truncatum
AUR62009019 Chenopodium quinoa
AUR62023283 Chenopodium quinoa
BcaB03g15220 Brassica carinata
BcaB03g15416 Brassica carinata
BcaB03g15807 Brassica carinata
BcaB05g24377 Brassica carinata
BcaB08g36853 Brassica carinata
BcaB08g36854 Brassica carinata
BcaC04g18897 Brassica carinata
BcaC08g45971 Brassica carinata
BcaC08g46122 Brassica carinata
BcaC08g46282 Brassica carinata
BcaC08g46286 Brassica carinata
BolC2t08556H Brassica oleracea
BolC6t38864H Brassica oleracea
BolC6t39271H Brassica oleracea
BolC9t58922H Brassica oleracea
BraA02t06565Z Brassica rapa
BraA07t30832Z Brassica rapa
BraA07t30998Z Brassica rapa
BraA07t31102Z Brassica rapa
BraA10t44353Z Brassica rapa
C02p24530 Brassica napus
C06p37610 Brassica napus
C06p41530 Brassica napus
C06p43260 Brassica napus
C09p60820 Brassica napus
CANSAT01G0067 Cannabis sativa
CANSAT78G1475 Cannabis sativa
CARHR059040 Cardamine hirsuta
CARHR061210 Cardamine hirsuta
Carub.0002s1311 Capsella rubella
Carub.0002s1492 Capsella rubella
Carub.0006s1439 Capsella rubella
Ca_08085_v3 Cicer arietinum L.
Cc07_g08620 Coffea canephora
CDE09G0983 Ceratophyllum demersum
Cfa007900 Carpinus fangiana
Cfa015849 Carpinus fangiana
Cfa015852 Carpinus fangiana
Cfa015853 Carpinus fangiana
Ciclev10013038m.g Citrus clementina
Ciclev10016989m.g Citrus clementina
CiPaw.03G063500 Carya illinoinensis
CiPaw.04G043700 Carya illinoinensis
CiPaw.05G241000 Carya illinoinensis
ClCG01G005860 Citrullus lanatus
ClCG11G007810 Citrullus lanatus
COL.COLO4_09360 Corchorus olitorius
COL.COLO4_32156 Corchorus olitorius
Cpa.g.sc170.42 Carica papaya
Cpa.g.sc65.57 Carica papaya
CsaV3_2G033780 Cucumis sativus L.
CsaV3_5G028830 Cucumis sativus L.
CSS0042149 Camellia sinensis var. sinensis
DCAR_021449 Daucus carota
Dinv33962 Davidia involucrata
Dinv34801 Davidia involucrata
Duzib133G1507 Durio zibethinus
Duzib138G0856 Durio zibethinus
Duzib248G0302 Durio zibethinus
Duzib251G0591 Durio zibethinus
Duzib268G0372 Durio zibethinus
ECA238G3055 Erigeron canadensis
ECA246G4506 Erigeron canadensis
EL10Ac2g04546 Beta vulgaris
Eucgr.J01514 Eucalyptus grandis
FAN01G0579 Fragaria x ananassa
FAN02G1640 Fragaria x ananassa
FAN03G2307 Fragaria x ananassa
FAN06G4960 Fragaria x ananassa
FAN07G0503 Fragaria x ananassa
FAN07G2257 Fragaria x ananassa
FAN10G2348 Fragaria x ananassa
FAN12G3405 Fragaria x ananassa
FAN12G3727 Fragaria x ananassa
FAN13G0633 Fragaria x ananassa
FAN13G2582 Fragaria x ananassa
FAN14G3652 Fragaria x ananassa
FAN16G3541 Fragaria x ananassa
FAN17G2365 Fragaria x ananassa
FAN22G0900 Fragaria x ananassa
FAN22G2030 Fragaria x ananassa
FAN22G2289 Fragaria x ananassa
FAN23G1965 Fragaria x ananassa
FAN28G2684 Fragaria x ananassa
FvH4_4g26860 Fragaria vesca
FvH4_7g03610 Fragaria vesca
Glyma.02G088600 Glycine max
Glyma.18G294900 Glycine max
Glyma.19G050700 Glycine max
Glyma.20G119200 Glycine max
Gohir.A03G148500 Gossypium hirsutum
Gohir.A11G165400 Gossypium hirsutum
Gohir.D02G171600 Gossypium hirsutum
Gohir.D11G171400 Gossypium hirsutum
Gorai.005G193000 Gossypium raimondii
Gorai.007G183800 Gossypium raimondii
HanXRQChr12g0375681 Helianthus annuus
Haze_14180 Corylus avellana
Haze_24605 Corylus avellana
Hma1.2p1_1109F.1_g258190 Hydrangea macrophylla
Lalb_Chr02g0145791 Lupinus albus
Lalb_Chr06g0165891 Lupinus albus
Lalb_Chr10g0091341 Lupinus albus
Lj1g0014230 Lotus japonicus
Lj2g0003840 Lotus japonicus
Lj4P188T25 Lonicera japonica
Lj5g0013847 Lotus japonicus
Lsat_1_v5_gn_2_81120 Lactuca sativa
Lsat_1_v5_gn_3_80541 Lactuca sativa
Manes.01G112200 Manihot esculenta
Manes.02G070500 Manihot esculenta
Manes.06G065600 Manihot esculenta
MBI16_g37123_MAGBIO Magnolia biondii
MD13G1036300 Malus domestica
MD16G1038900 Malus domestica
MD17G1247700 Malus domestica
Medtr1g110190 Medicago truncatula
Medtr7g082520 Medicago truncatula
MELO3C005343.2 Cucumis melo
MELO3C008147.2 Cucumis melo
Migut.H00233 Erythranthe guttata
Migut.L00500 Erythranthe guttata
Nitab4.5_0000625g0110 Nicotiana tabacum
Nitab4.5_0000753g0120 Nicotiana tabacum
Nitab4.5_0015828g0010 Nicotiana tabacum
Nn3g17932 Nelumbo nucifera
Nn4g23933 Nelumbo nucifera
Oeu008433.1 Olea europaea
Oeu012575.1 Olea europaea
Oeu012577.1 Olea europaea
Oeu036853.1 Olea europaea
Oeu039736.1 Olea europaea
Peaxi162Scf00104g00142 Petunia axillaris
Peaxi162Scf00394g00095 Petunia axillaris
PGR004G0132 Punica granatum
PGR042G1462 Punica granatum
PGR119G2525 Punica granatum
PGSC0003DMG400002449 Solanum tuberosum
PGSC0003DMG400024380 Solanum tuberosum
Phvul.004G066700 Phaseolus vulgaris
Phvul.007G030600 Phaseolus vulgaris
Phvul.008G007800 Phaseolus vulgaris
Potri.004G097200 Populus trichocarpa
Potri.008G123800 Populus trichocarpa
Potri.010G121300 Populus trichocarpa
Potri.017G117866 Populus trichocarpa
Prupe.1G315800 Prunus persica
Prupe.3G146400 Prunus persica
Psat3g098080 Pisum sativum
Psat6g225360 Pisum sativum
PSO017G0284 Papaver somniferum
PSO170G0811 Papaver somniferum
QL01p040313 Quercus lobata
QL02p049588 Quercus lobata
QL02p050634 Quercus lobata
RcHm_v2.0_Chr1g0326241 Rosa chinensis
RcHm_v2.0_Chr4g0434621 Rosa chinensis
Rhsim08G0083300 Rhododendron simsii
Sabra04G0066000 Salix brachista
Sabra10G0091400 Salix brachista
Sabra17G0096900 Salix brachista
SalBow3G2725 Salvia bowleyana
SalBow5G3107 Salvia bowleyana
SalBow5G4218 Salvia bowleyana
Sc10g0001080 Simmondsia chinensis
Sed0003377 Sechium edule
Sed0004988 Sechium edule
Sed0007756 Sechium edule
Sed0018757 Sechium edule
SGA_v2.0_scaffold49G18114 Striga asiatica
Solyc02g086260.1 Solanum lycopersicum
Solyc03g034300.1 Solanum lycopersicum
Sopen03g007090 Solanum pennellii
Sp5g21880 Schrenkiella parvula
Sp5g23500 Schrenkiella parvula
Sp7g03820 Schrenkiella parvula
TAR374G1690 Trochodendron aralioides
TAR433G0003 Trochodendron aralioides
TAR622G0779 Trochodendron aralioides
TAR622G1269 Trochodendron aralioides
THA.LOC104805579 Tarenaya hassleriana
THA.LOC104808293 Tarenaya hassleriana
THA.LOC104823851 Tarenaya hassleriana
THA.LOC104827465 Tarenaya hassleriana
Thecc.02G223300 Theobroma cacao
Thecc.04G129900 Theobroma cacao
Thhalv10015766m.g Eutrema salsugineum
Thhalv10019248m.g Eutrema salsugineum
Thhalv10019521m.g Eutrema salsugineum
TPR.G36596 Trifolium pratense
TWI31G0745 Tripterygium wilfordii
unitig_0.g841 Utricularia gibba
VMungo0464G0100 Vigna mungo
VMungo1383G0351 Vigna mungo

User provided reference genes

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