Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p41810 Brassica napus
A03p57070 Brassica napus
A05p19840 Brassica napus
A05p28280 Brassica napus
A06p02790 Brassica napus
A08p20550 Brassica napus
Aa31LG5G10320 Aethionema arabicum
Aa31LG8G7370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.371 Anthoceros agrestis
Actinidia09927 Actinidia chinensis
Actinidia10718 Actinidia chinensis
Actinidia35326 Actinidia chinensis
Ah.04g165590 Amaranthus hybridus
Ah.06g182980 Amaranthus hybridus
AL1G58680 Arabidopsis lyrata
AL3G34420 Arabidopsis lyrata
AL7G25720 Arabidopsis lyrata
Aqoxy4G01971 Aquilegia oxysepala
Aqoxy5G04182 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78MI69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B15YH7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E892WZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FX4D46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7N084 Arachis hypogaea
AT1G50950 Arabidopsis thaliana
AT3G20560 Arabidopsis thaliana
AT4G27080 Arabidopsis thaliana
ATR0697G255 Amborella trichopoda
Atru.chr2.3237 Acer truncatum
AUR62020531 Chenopodium quinoa
AUR62043223 Chenopodium quinoa
BcaB02g11198 Brassica carinata
BcaB03g12526 Brassica carinata
BcaB04g19114 Brassica carinata
BcaB06g26121 Brassica carinata
BcaB07g33537 Brassica carinata
BcaC01g03549 Brassica carinata
BcaC05g27376 Brassica carinata
BcaC05g28315 Brassica carinata
BcaC06g32712 Brassica carinata
BcaC07g38270 Brassica carinata
BcaC08g43268 Brassica carinata
BolC3t17408H Brassica oleracea
BolC5t32042H Brassica oleracea
BolC5t33092H Brassica oleracea
BolC6t35727H Brassica oleracea
BolC7t46012H Brassica oleracea
BolC8t48696H Brassica oleracea
BraA03t13334Z Brassica rapa
BraA03t14777Z Brassica rapa
BraA05t20889Z Brassica rapa
BraA05t21710Z Brassica rapa
BraA06t23486Z Brassica rapa
BraA08t34011Z Brassica rapa
C03p51190 Brassica napus
C05p33100 Brassica napus
C05p43760 Brassica napus
C06p06160 Brassica napus
C07p55000 Brassica napus
C08p10170 Brassica napus
CAN.G116.22 Capsicum annuum
CAN.G203.7 Capsicum annuum
CAN.G226.12 Capsicum annuum
CAN.G337.99 Capsicum annuum
CAN.G81.8 Capsicum annuum
CANSAT11G2205 Cannabis sativa
CARHR040990 Cardamine hirsuta
CARHR096350 Cardamine hirsuta
CARHR234730 Cardamine hirsuta
Carub.0001s3989 Capsella rubella
Carub.0003s2054 Capsella rubella
Carub.0007s1376 Capsella rubella
Ca_01736_v3 Cicer arietinum L.
Ca_18858_v3 Cicer arietinum L.
CBR_g22257 Chara braunii
Cc05_g13370 Coffea canephora
Cc10_g05290 Coffea canephora
Cc11_g00980 Coffea canephora
CDE05G1183 Ceratophyllum demersum
CDE11G0493 Ceratophyllum demersum
Cfa020401 Carpinus fangiana
Ciclev10008134m.g Citrus clementina
Ciclev10017629m.g Citrus clementina
Ciclev10023294m.g Citrus clementina
Ciclev10023649m.g Citrus clementina
CiPaw.11G185300 Carya illinoinensis
ClCG05G014630 Citrullus lanatus
COL.COLO4_09591 Corchorus olitorius
Cpa.g.sc97.49 Carica papaya
Cre02.g104350 Chlamydomonas reinhardtii
CsaV3_3G023160 Cucumis sativus L.
CsaV3_UNG097730 Cucumis sativus L.
CSS0010531 Camellia sinensis var. sinensis
CSS0044587 Camellia sinensis var. sinensis
DCAR_010029 Daucus carota
DCAR_022534 Daucus carota
Dinv40726 Davidia involucrata
Duzib170G1176 Durio zibethinus
Duzib213G0427 Durio zibethinus
Duzib268G0498 Durio zibethinus
ECA236G2341 Erigeron canadensis
ECA240G3179 Erigeron canadensis
EL10Ac4g07936 Beta vulgaris
EL10Ac5g11554 Beta vulgaris
Eucgr.F03438 Eucalyptus grandis
FAN11G1541 Fragaria x ananassa
FAN16G2989 Fragaria x ananassa
FAN21G2752 Fragaria x ananassa
FAN25G0818 Fragaria x ananassa
FvH4_3g21990 Fragaria vesca
Glyma.06G270200 Glycine max
Glyma.12G134500 Glycine max
Glyma.12G213100 Glycine max
Glyma.13G288600 Glycine max
Gohir.A04G020700 Gossypium hirsutum
Gohir.A08G019908 Gossypium hirsutum
Gohir.A13G140500 Gossypium hirsutum
Gohir.D05G366000 Gossypium hirsutum
Gohir.D08G030500 Gossypium hirsutum
Gohir.D13G145300 Gossypium hirsutum
Gorai.004G028100 Gossypium raimondii
Gorai.009G426100 Gossypium raimondii
Gorai.013G163100 Gossypium raimondii
GSVIVG01001983001 Vitis vinifera
HanXRQChr03g0077341 Helianthus annuus
HanXRQChr04g0124441 Helianthus annuus
HanXRQChr11g0337911 Helianthus annuus
HanXRQChr13g0407701 Helianthus annuus
Haze_09619 Corylus avellana
HPP92_015947 Vanilla planifolia
HPP92_015952 Vanilla planifolia
HPP92_015954 Vanilla planifolia
Hund23293 Selenicereus undatus
Lalb_Chr01g0006071 Lupinus albus
Lalb_Chr14g0366231 Lupinus albus
Lalb_Chr19g0134801 Lupinus albus
Lj1A867T32 Lonicera japonica
Lj3g0001988 Lotus japonicus
Lj3g0017739 Lotus japonicus
Lj8A166G89 Lonicera japonica
Lsat_1_v5_gn_4_118180 Lactuca sativa
Lsat_1_v5_gn_5_4920 Lactuca sativa
Lsat_1_v5_gn_5_81680 Lactuca sativa
Lsat_1_v5_gn_7_108961 Lactuca sativa
Manes.03G127900 Manihot esculenta
Mapoly0033s0073 Marchantia polymorpha
MBI02_g23958_MAGBIO Magnolia biondii
MCO09G603 Micromonas commoda
MCO14G077 Micromonas commoda
MD03G1209500 Malus domestica
MD11G1224300 Malus domestica
Medtr2g083260 Medicago truncatula
Medtr4g080800 Medicago truncatula
MELO3C018096.2 Cucumis melo
Migut.M01796 Erythranthe guttata
MSTRG.15165 Avicennia marina
MSTRG.6898 Avicennia marina
Nitab4.5_0000397g0240 Nicotiana tabacum
Nitab4.5_0003452g0020 Nicotiana tabacum
Nn1g07062 Nelumbo nucifera
Oeu021408.1 Olea europaea
Oeu032446.3 Olea europaea
Oeu062607.1 Olea europaea
Os07g0524100 Oryza sativa ssp. japonica
Peaxi162Scf00450g00865 Petunia axillaris
PGR031G0436 Punica granatum
PGSC0003DMG400001047 Solanum tuberosum
Phvul.005G092800 Phaseolus vulgaris
Phvul.011G139400 Phaseolus vulgaris
Potri.001G419300 Populus trichocarpa
Potri.011G135500 Populus trichocarpa
Pp3c14_18940 Physcomitrium patens
PRCOL_00003059 Prasinoderma coloniale
PRCOL_00006785 Prasinoderma coloniale
Prupe.4G205600 Prunus persica
Psat5g252160 Pisum sativum
Psat7g162480 Pisum sativum
PSO541G2817 Papaver somniferum
PSO675G8799 Papaver somniferum
QL08p012668 Quercus lobata
RcHm_v2.0_Chr2g0127211 Rosa chinensis
RcHm_v2.0_Chr5g0037841 Rosa chinensis
RhsimUnG0252300 Rhododendron simsii
Sabra11G0121200 Salix brachista
Sabra16G0284800 Salix brachista
Sc16g0006370 Simmondsia chinensis
Sed0015465 Sechium edule
Sed0022762 Sechium edule
SEGI_14123 Sequoiadendron giganteum
SEGI_15086 Sequoiadendron giganteum
SEGI_19048 Sequoiadendron giganteum
SEGI_28529 Sequoiadendron giganteum
SGA_v2.0_scaffold266G46141 Striga asiatica
SGA_v2.0_scaffold9G05050 Striga asiatica
SMO239G0034 Selaginella moellendorffii
Solyc07g064250.3 Solanum lycopersicum
Sopen07g032400 Solanum pennellii
Sp1g37690 Schrenkiella parvula
Sp3g18580 Schrenkiella parvula
Sp7g25050 Schrenkiella parvula
TAR627G1168 Trochodendron aralioides
TAR629G1259 Trochodendron aralioides
THA.LOC104812532 Tarenaya hassleriana
THA.LOC104817882 Tarenaya hassleriana
Thecc.07G050200 Theobroma cacao
Thhalv10011436m.g Eutrema salsugineum
Thhalv10020619m.g Eutrema salsugineum
Thhalv10025074m.g Eutrema salsugineum
TPR.G19970 Trifolium pratense
TPR.G25904 Trifolium pratense
TWI38G0096 Tripterygium wilfordii
TWI39G0275 Tripterygium wilfordii
unitig_0.g755 Utricularia gibba
vmacro09740 Vaccinium macrocarpon
vmacro11756 Vaccinium macrocarpon
VMungo1080G0160 Vigna mungo
VMungo1127G1954 Vigna mungo
VMungo1127G2213 Vigna mungo
Zm00001eb106180 Zea mays

User provided reference genes

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