Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22320 Brassica napus
A07p43920 Brassica napus
A07p43930 Brassica napus
Aa31LG4G2310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1069 Anthoceros agrestis
Actinidia07510 Actinidia chinensis
Actinidia07512 Actinidia chinensis
Actinidia12592 Actinidia chinensis
Ah.04g164150 Amaranthus hybridus
AL262U10012 Arabidopsis lyrata
AL262U10014 Arabidopsis lyrata
AL262U10016 Arabidopsis lyrata
AL2G39070 Arabidopsis lyrata
AL2G39082 Arabidopsis lyrata
AL2G39084 Arabidopsis lyrata
Aqoxy4G00220 Aquilegia oxysepala
Aqoxy4G00223 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F86IGW Arachis hypogaea
AT1G78660 Arabidopsis thaliana
AT1G78670 Arabidopsis thaliana
AT1G78680 Arabidopsis thaliana
ATR0127G004 Amborella trichopoda
Atru.chr2.2059 Acer truncatum
AUR62019606 Chenopodium quinoa
AUR62037582 Chenopodium quinoa
BcaB03g16026 Brassica carinata
BcaB05g25151 Brassica carinata
BcaC03g15835 Brassica carinata
BolC2t09599H Brassica oleracea
BolC6t40273H Brassica oleracea
BolC6t40275H Brassica oleracea
BraA02t07236Z Brassica rapa
BraA07t31898Z Brassica rapa
BraA07t31900Z Brassica rapa
C02p35860 Brassica napus
C06p52540 Brassica napus
C06p52560 Brassica napus
CAN.G375.30 Capsicum annuum
CAN.G904.33 Capsicum annuum
CANSAT35G0714 Cannabis sativa
CARHR072190 Cardamine hirsuta
CARHR072200 Cardamine hirsuta
CARHR072210 Cardamine hirsuta
Carub.0002s2551 Capsella rubella
Carub.0002s2553 Capsella rubella
Carub.0002s2554 Capsella rubella
Ca_03949_v3 Cicer arietinum L.
Ca_03950_v3 Cicer arietinum L.
CBR_g46825 Chara braunii
Cc05_g10920 Coffea canephora
Ciclev10003039m.g Citrus clementina
Ciclev10006360m.g Citrus clementina
Ciclev10020608m.g Citrus clementina
Ciclev10020872m.g Citrus clementina
Ciclev10021719m.g Citrus clementina
Ciclev10022857m.g Citrus clementina
Ciclev10023089m.g Citrus clementina
Ciclev10023127m.g Citrus clementina
Ciclev10023220m.g Citrus clementina
Ciclev10024365m.g Citrus clementina
CiPaw.11G156700 Carya illinoinensis
CiPaw.11G156900 Carya illinoinensis
CiPaw.11G157200 Carya illinoinensis
ClCG11G017400 Citrullus lanatus
COL.COLO4_17512 Corchorus olitorius
Cpa.g.sc77.51 Carica papaya
Cre06.g275050 Chlamydomonas reinhardtii
Cre07.g315050 Chlamydomonas reinhardtii
CsaV3_4G033040 Cucumis sativus L.
CsaV3_4G033050 Cucumis sativus L.
CsaV3_4G033060 Cucumis sativus L.
CSS0012460 Camellia sinensis var. sinensis
DCAR_019604 Daucus carota
Dinv15006 Davidia involucrata
Duzib213G0586 Durio zibethinus
ECA236G4062 Erigeron canadensis
ECA240G1349 Erigeron canadensis
EL10Ac4g08383 Beta vulgaris
Eucgr.F01289 Eucalyptus grandis
Eucgr.F01292 Eucalyptus grandis
Eucgr.F01296 Eucalyptus grandis
Eucgr.F01299 Eucalyptus grandis
FAN11G1668 Fragaria x ananassa
FAN16G1014 Fragaria x ananassa
FAN21G2254 Fragaria x ananassa
FAN25G3870 Fragaria x ananassa
FvH4_3g18070 Fragaria vesca
FvH4_3g18102 Fragaria vesca
Glyma.13G267851 Glycine max
Glyma.13G268000 Glycine max
Gohir.A01G051200 Gossypium hirsutum
Gohir.A01G051400 Gossypium hirsutum
Gohir.D01G041000 Gossypium hirsutum
Gorai.002G051200 Gossypium raimondii
Gorai.002G051600 Gossypium raimondii
GSVIVG01014167001 Vitis vinifera
HanXRQChr15g0495171 Helianthus annuus
Haze_09254 Corylus avellana
Hma1.2p1_0050F.1_g029010 Hydrangea macrophylla
Hma1.2p1_1650F.1_g295670 Hydrangea macrophylla
HPP92_006383 Vanilla planifolia
Lalb_Chr20g0109171 Lupinus albus
Lalb_Chr25g0285721 Lupinus albus
Lj1A826G63 Lonicera japonica
Lj1g0011966 Lotus japonicus
Lj3g0027506 Lotus japonicus
Lsat_1_v5_gn_7_102180 Lactuca sativa
Lsat_1_v5_gn_9_100580 Lactuca sativa
Manes.03G099600 Manihot esculenta
Manes.15G096800 Manihot esculenta
Mapoly0032s0037 Marchantia polymorpha
MBI07_g00462_MAGBIO Magnolia biondii
MCO13G371 Micromonas commoda
MD00G1184200 Malus domestica
MD03G1244700 Malus domestica
MD03G1244800 Malus domestica
Medtr2g075760 Medicago truncatula
Medtr2g075770 Medicago truncatula
Medtr2g075780 Medicago truncatula
Medtr2g075790 Medicago truncatula
Medtr2g075810 Medicago truncatula
MELO3C025645.2 Cucumis melo
MELO3C032479.2 Cucumis melo
Migut.H02009 Erythranthe guttata
Migut.H02010 Erythranthe guttata
Migut.H02014 Erythranthe guttata
Migut.H02016 Erythranthe guttata
Migut.M00712 Erythranthe guttata
MSTRG.14241 Avicennia marina
Nitab4.5_0000347g0200 Nicotiana tabacum
Nitab4.5_0000383g0060 Nicotiana tabacum
Nitab4.5_0000788g0020 Nicotiana tabacum
Nitab4.5_0006663g0030 Nicotiana tabacum
Nitab4.5_0022404g0010 Nicotiana tabacum
Nn3g21072 Nelumbo nucifera
Nn6g34459 Nelumbo nucifera
Oeu036486.2 Olea europaea
Os05g0517500 Oryza sativa ssp. japonica
Peaxi162Scf00111g01453 Petunia axillaris
Peaxi162Scf00111g01454 Petunia axillaris
Peaxi162Scf00692g00317 Petunia axillaris
Peaxi162Scf01132g00139 Petunia axillaris
PGR083G1989 Punica granatum
PGSC0003DMG400007066 Solanum tuberosum
PGSC0003DMG400021256 Solanum tuberosum
PGSC0003DMG400035974 Solanum tuberosum
Phvul.005G080600 Phaseolus vulgaris
Phvul.005G080700 Phaseolus vulgaris
Potri.001G387100 Populus trichocarpa
Potri.003G026800 Populus trichocarpa
Potri.011G107600 Populus trichocarpa
Potri.012G110400 Populus trichocarpa
Pp3c17_12060 Physcomitrium patens
Pp3c17_4440 Physcomitrium patens
Pp3c26_1140 Physcomitrium patens
Pp3c9_2280 Physcomitrium patens
PRCOL_00000035 Prasinoderma coloniale
PRCOL_00004178 Prasinoderma coloniale
Prupe.4G159900 Prunus persica
Psat5g236280 Pisum sativum
PSO079G0057 Papaver somniferum
PSO170G0675 Papaver somniferum
PSO210G7190 Papaver somniferum
PSO423G0175 Papaver somniferum
PSO782G2947 Papaver somniferum
QL08p022923 Quercus lobata
QL08p022953 Quercus lobata
RcHm_v2.0_Chr5g0030171 Rosa chinensis
RcHm_v2.0_Chr5g0030241 Rosa chinensis
RcHm_v2.0_Chr5g0030341 Rosa chinensis
RcHm_v2.0_Chr5g0030431 Rosa chinensis
RcHm_v2.0_Chr5g0030511 Rosa chinensis
Rhsim06G0210400 Rhododendron simsii
Sabra11G0095400 Salix brachista
Sabra16G0254600 Salix brachista
SalBow7G1363 Salvia bowleyana
SalBow7G1595 Salvia bowleyana
SalBow7G2473 Salvia bowleyana
SalBow7G3364 Salvia bowleyana
SalBow7G4576 Salvia bowleyana
Sc15g0000080 Simmondsia chinensis
Sed0012404 Sechium edule
SEGI_00894 Sequoiadendron giganteum
SEGI_10926 Sequoiadendron giganteum
SEGI_20276 Sequoiadendron giganteum
SEGI_24696 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34276 Striga asiatica
SGA_v2.0_scaffold130G34280 Striga asiatica
SGA_v2.0_scaffold47G17804 Striga asiatica
SGA_v2.0_scaffold73G24394 Striga asiatica
SMO165G0059 Selaginella moellendorffii
SMO165G0138 Selaginella moellendorffii
SMO272G0009 Selaginella moellendorffii
Solyc07g062270.3 Solanum lycopersicum
Solyc07g062280.3 Solanum lycopersicum
Solyc10g007410.4 Solanum lycopersicum
Sopen07g030550 Solanum pennellii
Sopen07g030560 Solanum pennellii
Sopen10g003240 Solanum pennellii
Sp5g33740 Schrenkiella parvula
SpUn0074_0020 Schrenkiella parvula
SpUn0074_0040 Schrenkiella parvula
SpUn0074_0050 Schrenkiella parvula
TAR627G0271 Trochodendron aralioides
TAR629G1672 Trochodendron aralioides
THA.LOC104813997 Tarenaya hassleriana
Thecc.07G126100 Theobroma cacao
Thecc.07G126200 Theobroma cacao
Thecc.07G126300 Theobroma cacao
Thhalv10018738m.g Eutrema salsugineum
Thhalv10018776m.g Eutrema salsugineum
TPR.G16064 Trifolium pratense
TWI39G0119 Tripterygium wilfordii
unitig_0.g2277 Utricularia gibba
vmacro11956 Vaccinium macrocarpon
VMungo1080G1321 Vigna mungo
VMungo1080G1395 Vigna mungo
Zm00001eb199250 Zea mays
Zm00001eb353180 Zea mays

User provided reference genes

Program Settings