Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37230 Brassica napus
A05p37710 Brassica napus
A10p30110 Brassica napus
Aa31LG3G5040 Aethionema arabicum
Aa31sc52G110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3919 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1690 Anthoceros agrestis
Actinidia06175 Actinidia chinensis
Actinidia32053 Actinidia chinensis
Ah.08g210160 Amaranthus hybridus
Ah.15g090500 Amaranthus hybridus
AL3G23180 Arabidopsis lyrata
AL6G16330 Arabidopsis lyrata
Aqoxy4G02674 Aquilegia oxysepala
Aqoxy4G02679 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3IK0CY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7I6HEI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JV7GZ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKQH6A Arachis hypogaea
AT3G11630 Arabidopsis thaliana
AT5G06290 Arabidopsis thaliana
ATR0772G084 Amborella trichopoda
Atru.chr8.1389 Acer truncatum
AUR62006270 Chenopodium quinoa
AUR62037040 Chenopodium quinoa
BcaB04g18655 Brassica carinata
BcaB04g21124 Brassica carinata
BcaB06g25601 Brassica carinata
BcaB08g35728 Brassica carinata
BcaC01g04091 Brassica carinata
BcaC01g04098 Brassica carinata
BcaC05g29348 Brassica carinata
BcaC06g32362 Brassica carinata
BcaC06g32592 Brassica carinata
BNapus_Darmor_BZH_scaffold_145p00040 Brassica napus
BolC1t05303H Brassica oleracea
BolC3t16771H Brassica oleracea
BolC5t34295H Brassica oleracea
BolC9t59797H Brassica oleracea
BraA01t04172Z Brassica rapa
BraA03t12883Z Brassica rapa
BraA05t22566Z Brassica rapa
BraA10t45049Z Brassica rapa
C03p45090 Brassica napus
C05p56310 Brassica napus
C09p70520 Brassica napus
CAN.G1245.19 Capsicum annuum
CAN.G574.32 Capsicum annuum
CANSAT64G2433 Cannabis sativa
CARHR086180 Cardamine hirsuta
CARHR207020 Cardamine hirsuta
CARHR207030 Cardamine hirsuta
Carub.0003s1095 Capsella rubella
Ca_09044_v3 Cicer arietinum L.
Ca_14603_v3 Cicer arietinum L.
CBR_g34275 Chara braunii
Cc06_g06390 Coffea canephora
CDE02G0304 Ceratophyllum demersum
CDE08G1016 Ceratophyllum demersum
Cfa016671 Carpinus fangiana
Ciclev10012459m.g Citrus clementina
CiPaw.09G019300 Carya illinoinensis
CiPaw.10G015700 Carya illinoinensis
ClCG10G018500 Citrullus lanatus
COL.COLO4_23950 Corchorus olitorius
COL.COLO4_29610 Corchorus olitorius
Cpa.g.sc104.57 Carica papaya
Cre02.g114600 Chlamydomonas reinhardtii
Cre06.g257601 Chlamydomonas reinhardtii
Cre17.g743897 Chlamydomonas reinhardtii
CsaV3_3G037760 Cucumis sativus L.
CSS0026324 Camellia sinensis var. sinensis
CSS0042298 Camellia sinensis var. sinensis
DCAR_013432 Daucus carota
DCAR_016922 Daucus carota
DCAR_031701 Daucus carota
DCAR_031759 Daucus carota
Dinv12326 Davidia involucrata
Dinv31747 Davidia involucrata
Duzib093G1492 Durio zibethinus
Duzib106G1688 Durio zibethinus
Duzib128G1070 Durio zibethinus
ECA233G5864 Erigeron canadensis
ECA248G1757 Erigeron canadensis
EL10Ac7g16812 Beta vulgaris
Eucgr.K02606 Eucalyptus grandis
FAN02G3899 Fragaria x ananassa
FAN05G1588 Fragaria x ananassa
FAN05G4371 Fragaria x ananassa
FAN05G5205 Fragaria x ananassa
FAN09G4155 Fragaria x ananassa
FAN12G2755 Fragaria x ananassa
FAN14G3000 Fragaria x ananassa
FAN27G0937 Fragaria x ananassa
FvH4_4g15322 Fragaria vesca
FvH4_4g15580 Fragaria vesca
FvH4_6g20020 Fragaria vesca
Glyma.02G198400 Glycine max
Glyma.03G200600 Glycine max
Glyma.10G078400 Glycine max
Glyma.19G198200 Glycine max
Gohir.A04G061100 Gossypium hirsutum
Gohir.D04G095100 Gossypium hirsutum
Gohir.D12G022150 Gossypium hirsutum
Gorai.009G397800 Gossypium raimondii
GSVIVG01033933001 Vitis vinifera
HanXRQChr01g0025631 Helianthus annuus
HanXRQChr02g0053771 Helianthus annuus
HanXRQChr13g0398251 Helianthus annuus
Haze_19685 Corylus avellana
Haze_27547 Corylus avellana
Haze_27581 Corylus avellana
Hma1.2p1_0064F.1_g034770 Hydrangea macrophylla
Hma1.2p1_1442F.1_g283750 Hydrangea macrophylla
HPP92_025141 Vanilla planifolia
HPP92_026081 Vanilla planifolia
Hund03845 Selenicereus undatus
Hund19871 Selenicereus undatus
Lalb_Chr06g0172581 Lupinus albus
Lalb_Chr20g0111451 Lupinus albus
Lalb_Chr25g0288071 Lupinus albus
Lj1A1048T27 Lonicera japonica
Lj1g0014032 Lotus japonicus
Lj5g0012215 Lotus japonicus
Lsat_1_v5_gn_1_57120 Lactuca sativa
Lsat_1_v5_gn_6_35061 Lactuca sativa
Manes.08G031800 Manihot esculenta
Manes.09G047500 Manihot esculenta
Mapoly0014s0048 Marchantia polymorpha
MBI01_g04528_MAGBIO Magnolia biondii
MBI17_g29500_MAGBIO Magnolia biondii
MCO10G030 Micromonas commoda
MD12G1037300 Malus domestica
MD14G1036400 Malus domestica
MD16G1283700 Malus domestica
Medtr1g105090 Medicago truncatula
Medtr7g105830 Medicago truncatula
MELO3C009519.2 Cucumis melo
Migut.J00718 Erythranthe guttata
Migut.L01836 Erythranthe guttata
MSTRG.19317 Avicennia marina
MSTRG.5906 Avicennia marina
Nitab4.5_0000020g0330 Nicotiana tabacum
Nitab4.5_0001287g0150 Nicotiana tabacum
Nitab4.5_0004677g0020 Nicotiana tabacum
Nitab4.5_0010740g0010 Nicotiana tabacum
Nn6g34749 Nelumbo nucifera
Oeu014365.1 Olea europaea
Oeu044715.1 Olea europaea
Oeu058143.1 Olea europaea
Os02g0537700 Oryza sativa ssp. japonica
Os04g0416400 Oryza sativa ssp. japonica
Peaxi162Scf00029g00015 Petunia axillaris
Peaxi162Scf00211g01734 Petunia axillaris
PGR004G0867 Punica granatum
PGR142G1396 Punica granatum
PGSC0003DMG400016387 Solanum tuberosum
PGSC0003DMG400028238 Solanum tuberosum
Phvul.001G194100 Phaseolus vulgaris
Phvul.001G194200 Phaseolus vulgaris
Potri.006G204900 Populus trichocarpa
Potri.016G072100 Populus trichocarpa
Pp3c1_21200 Physcomitrium patens
Pp3c1_21230 Physcomitrium patens
Pp3c2_16260 Physcomitrium patens
PRCOL_00002734 Prasinoderma coloniale
PRCOL_00005818 Prasinoderma coloniale
Prupe.7G097900 Prunus persica
Psat3g030120 Pisum sativum
Psat6g083280 Pisum sativum
Psat6g116880 Pisum sativum
PSO339G5074 Papaver somniferum
PSO384G4577 Papaver somniferum
QL07p037428 Quercus lobata
RcHm_v2.0_Chr3g0475471 Rosa chinensis
Rhsim03G0066700 Rhododendron simsii
Rhsim03G0066800 Rhododendron simsii
Sabra06G0157900 Salix brachista
Sabra16G0075000 Salix brachista
Sc20g0006650 Simmondsia chinensis
Sed0003794 Sechium edule
Sed0019283 Sechium edule
SEGI_00958 Sequoiadendron giganteum
SEGI_11964 Sequoiadendron giganteum
SEGI_34561 Sequoiadendron giganteum
SGA_v2.0_scaffold184G40031 Striga asiatica
SGA_v2.0_scaffold35G14000 Striga asiatica
SMO137G0124 Selaginella moellendorffii
SMO197G0034 Selaginella moellendorffii
SMO352G0078 Selaginella moellendorffii
Solyc01g007740.4 Solanum lycopersicum
Solyc10g082030.2 Solanum lycopersicum
Sopen01g003280 Solanum pennellii
Sopen10g032540 Solanum pennellii
Sp3g09860 Schrenkiella parvula
Sp6g36560 Schrenkiella parvula
TAR369G0290 Trochodendron aralioides
TAR623G1756 Trochodendron aralioides
TAR633G0344 Trochodendron aralioides
THA.LOC104809959 Tarenaya hassleriana
THA.LOC104826809 Tarenaya hassleriana
Thecc.05G101400 Theobroma cacao
Thhalv10009616m.g Eutrema salsugineum
Thhalv10014403m.g Eutrema salsugineum
Thhalv10017767m.g Eutrema salsugineum
Thhalv10021326m.g Eutrema salsugineum
Thhalv10022410m.g Eutrema salsugineum
TPR.G23339 Trifolium pratense
TPR.G23563 Trifolium pratense
TWI53G2011 Tripterygium wilfordii
TWI74G0619 Tripterygium wilfordii
unitig_749.g14205 Utricularia gibba
vmacro07464 Vaccinium macrocarpon
vmacro19692 Vaccinium macrocarpon
VMungo0647G1580 Vigna mungo
VMungo1383G0691 Vigna mungo
VMungo1383G0982 Vigna mungo
Zm00001eb181530 Zea mays
Zm00001eb243010 Zea mays

User provided reference genes

Program Settings