Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01400 Brassica napus
A07p25220 Brassica napus
A08p15450 Brassica napus
A09p53080 Brassica napus
Aa31LG10G15060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3283 Anthoceros agrestis
Actinidia12259 Actinidia chinensis
Actinidia12689 Actinidia chinensis
Actinidia31411 Actinidia chinensis
Actinidia33464 Actinidia chinensis
Ah.05g174150 Amaranthus hybridus
Ah.10g025390 Amaranthus hybridus
AL5G43140 Arabidopsis lyrata
Aqoxy5G00263 Aquilegia oxysepala
Aqoxy7G03170 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4W0BKM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FA29PG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GL64VW Arachis hypogaea
AT3G60820 Arabidopsis thaliana
ATR0712G143 Amborella trichopoda
Atru.chr10.1178 Acer truncatum
Atru.chr5.311 Acer truncatum
AUR62004218 Chenopodium quinoa
AUR62013630 Chenopodium quinoa
BcaB02g07399 Brassica carinata
BcaC02g10187 Brassica carinata
BcaC05g25740 Brassica carinata
BcaC07g40603 Brassica carinata
BcaC07g42643 Brassica carinata
BcaC08g45086 Brassica carinata
BolC1t03897H Brassica oleracea
BolC4t23882H Brassica oleracea
BolC4t24303H Brassica oleracea
BolC4t24727H Brassica oleracea
BolC4t25701H Brassica oleracea
BolC6t37867H Brassica oleracea
BolC8t51168H Brassica oleracea
BraA04t15859Z Brassica rapa
BraA07t30164Z Brassica rapa
BraA09t40734Z Brassica rapa
C01p39470 Brassica napus
C04p23850 Brassica napus
C04p27600 Brassica napus
C04p31790 Brassica napus
C04p41190 Brassica napus
C06p26930 Brassica napus
C08p35780 Brassica napus
CAN.G1019.4 Capsicum annuum
CAN.G358.42 Capsicum annuum
CANSAT56G3211 Cannabis sativa
CARHR171210 Cardamine hirsuta
Carub.0005s2757 Capsella rubella
Ca_03014_v3 Cicer arietinum L.
Ca_06661_v3 Cicer arietinum L.
Ca_19905_v3 Cicer arietinum L.
Ca_19907_v3 Cicer arietinum L.
CBR_g21847 Chara braunii
Cc02_g23770 Coffea canephora
Cc02_g27280 Coffea canephora
Cc02_g36680 Coffea canephora
Cc06_g19430 Coffea canephora
Cc07_g09940 Coffea canephora
Cc09_g08910 Coffea canephora
CDE04G3268 Ceratophyllum demersum
CDE12G0228 Ceratophyllum demersum
Cfa001719 Carpinus fangiana
Cfa003809 Carpinus fangiana
Cfa026697 Carpinus fangiana
Ciclev10022119m.g Citrus clementina
Ciclev10032692m.g Citrus clementina
CiPaw.01G261800 Carya illinoinensis
CiPaw.02G167600 Carya illinoinensis
ClCG05G002210 Citrullus lanatus
COL.COLO4_12550 Corchorus olitorius
Cpa.g.sc349.3 Carica papaya
Cre26.g756797 Chlamydomonas reinhardtii
CsaV3_3G009670 Cucumis sativus L.
CSS0005196 Camellia sinensis var. sinensis
CSS0011728 Camellia sinensis var. sinensis
CSS0021281 Camellia sinensis var. sinensis
DCAR_006866 Daucus carota
Dinv32379 Davidia involucrata
Dinv43712 Davidia involucrata
Duzib133G0737 Durio zibethinus
Duzib138G1909 Durio zibethinus
Duzib205G0787 Durio zibethinus
ECA234G2779 Erigeron canadensis
ECA234G3821 Erigeron canadensis
ECA240G4554 Erigeron canadensis
EL10Ac1g00896 Beta vulgaris
Eucgr.E01416 Eucalyptus grandis
FAN01G2692 Fragaria x ananassa
FAN03G3077 Fragaria x ananassa
FAN06G2068 Fragaria x ananassa
FAN06G3432 Fragaria x ananassa
FAN10G0051 Fragaria x ananassa
FAN10G2702 Fragaria x ananassa
FvH4_7g11920 Fragaria vesca
Glyma.03G134000 Glycine max
Glyma.08G286200 Glycine max
Glyma.18G138900 Glycine max
Gohir.A07G145500 Gossypium hirsutum
Gohir.A08G031200 Gossypium hirsutum
Gohir.D07G151700 Gossypium hirsutum
Gohir.D08G042300 Gossypium hirsutum
Gorai.001G173600 Gossypium raimondii
Gorai.004G040900 Gossypium raimondii
GSVIVG01000943001 Vitis vinifera
GSVIVG01027613001 Vitis vinifera
HanXRQChr03g0093901 Helianthus annuus
HanXRQChr13g0425221 Helianthus annuus
Haze_15645 Corylus avellana
Haze_16817 Corylus avellana
Haze_26390 Corylus avellana
Hma1.2p1_0033F.1_g021050 Hydrangea macrophylla
HPP92_001554 Vanilla planifolia
HPP92_003304 Vanilla planifolia
HPP92_003327 Vanilla planifolia
HPP92_003336 Vanilla planifolia
Hund17019 Selenicereus undatus
Hund30974 Selenicereus undatus
Lalb_Chr07g0189781 Lupinus albus
Lalb_Chr12g0208271 Lupinus albus
Lj3g0012915 Lotus japonicus
Lj4A208T81 Lonicera japonica
Lj7A528T56 Lonicera japonica
Lsat_1_v5_gn_3_132000 Lactuca sativa
Lsat_1_v5_gn_4_40961 Lactuca sativa
Manes.01G265800 Manihot esculenta
Manes.05G045100 Manihot esculenta
Mapoly0019s0015 Marchantia polymorpha
MBI04_g35277_MAGBIO Magnolia biondii
MBI12_g10756_MAGBIO Magnolia biondii
MBI12_g10757_MAGBIO Magnolia biondii
MCO07G216 Micromonas commoda
MD02G1204000 Malus domestica
MD07G1122000 Malus domestica
Medtr2g098010 Medicago truncatula
Medtr5g079740 Medicago truncatula
MELO3C006187.2 Cucumis melo
Migut.B01636 Erythranthe guttata
MSTRG.17194 Avicennia marina
MSTRG.17195 Avicennia marina
MSTRG.28187 Avicennia marina
Nitab4.5_0000136g0220 Nicotiana tabacum
Nitab4.5_0000344g0130 Nicotiana tabacum
Nitab4.5_0001525g0010 Nicotiana tabacum
Nitab4.5_0001665g0020 Nicotiana tabacum
Nitab4.5_0003001g0030 Nicotiana tabacum
Nitab4.5_0005626g0010 Nicotiana tabacum
Nitab4.5_0008224g0020 Nicotiana tabacum
Nn1g01231 Nelumbo nucifera
Oeu005784.1 Olea europaea
Oeu037914.1 Olea europaea
Oeu064467.1 Olea europaea
Os08g0529100 Oryza sativa ssp. japonica
Os09g0505600 Oryza sativa ssp. japonica
Peaxi162Scf00008g03318 Petunia axillaris
Peaxi162Scf00010g00920 Petunia axillaris
Peaxi162Scf00010g00921 Petunia axillaris
PGR102G2215 Punica granatum
PGSC0003DMG400003524 Solanum tuberosum
PGSC0003DMG400022569 Solanum tuberosum
Phvul.003G030301 Phaseolus vulgaris
Phvul.003G061000 Phaseolus vulgaris
Potri.002G148300 Populus trichocarpa
Potri.014G069800 Populus trichocarpa
Pp3c16_16960 Physcomitrium patens
Pp3c27_2640 Physcomitrium patens
PRCOL_00006833 Prasinoderma coloniale
Prupe.2G145800 Prunus persica
Psat5g271920 Pisum sativum
PSO017G2820 Papaver somniferum
PSO478G4914 Papaver somniferum
PSO782G4266 Papaver somniferum
QL08p052463 Quercus lobata
RcHm_v2.0_Chr1g0350601 Rosa chinensis
Rhsim07G0027400 Rhododendron simsii
Sabra02G0115700 Salix brachista
Sabra02G0117400 Salix brachista
Sabra14G0049500 Salix brachista
SalBow5G2585 Salvia bowleyana
SalBow5G5391 Salvia bowleyana
Sc02g0002570 Simmondsia chinensis
Sc23g0003550 Simmondsia chinensis
Sed0009819 Sechium edule
Sed0026826 Sechium edule
SEGI_02962 Sequoiadendron giganteum
SEGI_16470 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05585 Striga asiatica
SGA_v2.0_scaffold43G16475 Striga asiatica
SMO114G0021 Selaginella moellendorffii
SMO298G0001 Selaginella moellendorffii
Solyc02g084920.3 Solanum lycopersicum
Sopen02g029590 Solanum pennellii
Sopen03g006530 Solanum pennellii
Sp5g02430 Schrenkiella parvula
TAR636G1572 Trochodendron aralioides
THA.LOC104802445 Tarenaya hassleriana
THA.LOC104817248 Tarenaya hassleriana
Thecc.01G376000 Theobroma cacao
Thecc.05G200900 Theobroma cacao
Thhalv10006409m.g Eutrema salsugineum
TPR.G30841 Trifolium pratense
TPR.G3493 Trifolium pratense
TPR.G6863 Trifolium pratense
TWI23G0395 Tripterygium wilfordii
TWI59G1020 Tripterygium wilfordii
TWI59G1266 Tripterygium wilfordii
unitig_32.g10932 Utricularia gibba
unitig_748.g8185 Utricularia gibba
vmacro13398 Vaccinium macrocarpon
vmacro21007 Vaccinium macrocarpon
VMungo0251G2852 Vigna mungo
VMungo0464G0735 Vigna mungo
Zm00001eb036440 Zea mays
Zm00001eb102400 Zea mays
Zm00001eb317720 Zea mays
Zm00001eb355470 Zea mays

User provided reference genes

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