Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17650 Brassica napus
A07p30420 Brassica napus
Aa31LG4G8580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis
Actinidia17974 Actinidia chinensis
Actinidia37868 Actinidia chinensis
Ah.04g150240 Amaranthus hybridus
Ah.04g150340 Amaranthus hybridus
Ah.15g091760 Amaranthus hybridus
AL2G31680 Arabidopsis lyrata
Aqoxy3G03721 Aquilegia oxysepala
Aqoxy3G04121 Aquilegia oxysepala
Aqoxy6G01455 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HV9XRS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SAB2K2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W2RGT3 Arachis hypogaea
AT1G72050 Arabidopsis thaliana
ATR0733G234 Amborella trichopoda
ATR1136G090 Amborella trichopoda
ATR1136G200 Amborella trichopoda
Atru.chr10.2419 Acer truncatum
Atru.chr13.2 Acer truncatum
Atru.chr7.2717 Acer truncatum
AUR62018436 Chenopodium quinoa
AUR62020997 Chenopodium quinoa
BcaB03g15643 Brassica carinata
BcaB05g24702 Brassica carinata
BcaC03g15328 Brassica carinata
BcaC08g45739 Brassica carinata
BolC2t08984H Brassica oleracea
BolC6t38625H Brassica oleracea
BraA02t06811Z Brassica rapa
BraA07t30679Z Brassica rapa
C02p29330 Brassica napus
C06p35180 Brassica napus
CAN.G959.24 Capsicum annuum
CARHR064860 Cardamine hirsuta
CARHR064870 Cardamine hirsuta
Carub.0002s1883 Capsella rubella
Ca_12615_v3 Cicer arietinum L.
CBR_g6693 Chara braunii
Cc11_g07170 Coffea canephora
CDE02G1579 Ceratophyllum demersum
CDE02G4023 Ceratophyllum demersum
CDE04G1776 Ceratophyllum demersum
CDE04G2204 Ceratophyllum demersum
Cfa008139 Carpinus fangiana
Cfa008143 Carpinus fangiana
Cfa020344 Carpinus fangiana
Cfa020349 Carpinus fangiana
Cfa020612 Carpinus fangiana
Cfa020613 Carpinus fangiana
Ciclev10012016m.g Citrus clementina
CiPaw.03G019700 Carya illinoinensis
CiPaw.04G013100 Carya illinoinensis
CiPaw.04G106900 Carya illinoinensis
ClCG01G026000 Citrullus lanatus
ClCG05G026900 Citrullus lanatus
ClCG10G021960 Citrullus lanatus
COL.COLO4_10043 Corchorus olitorius
COL.COLO4_33458 Corchorus olitorius
Cpa.g.sc66.19 Carica papaya
Cpa.g.sc66.20 Carica papaya
CsaV3_3G034030 Cucumis sativus L.
CsaV3_5G036840 Cucumis sativus L.
CSS0039589 Camellia sinensis var. sinensis
DCAR_007178 Daucus carota
DCAR_030989 Daucus carota
Dinv22133 Davidia involucrata
Dinv40311 Davidia involucrata
Duzib235G1283 Durio zibethinus
ECA240G3446 Erigeron canadensis
EL10Ac3g07342 Beta vulgaris
Eucgr.A00553 Eucalyptus grandis
Eucgr.A00559 Eucalyptus grandis
Eucgr.A00563 Eucalyptus grandis
Eucgr.A00567 Eucalyptus grandis
Eucgr.A00576 Eucalyptus grandis
Eucgr.A00580 Eucalyptus grandis
Eucgr.A00584 Eucalyptus grandis
Eucgr.A00588 Eucalyptus grandis
Eucgr.C02983 Eucalyptus grandis
FAN07G0209 Fragaria x ananassa
FAN07G0983 Fragaria x ananassa
FAN12G0368 Fragaria x ananassa
FAN12G2362 Fragaria x ananassa
FAN19G0040 Fragaria x ananassa
FAN23G0770 Fragaria x ananassa
FAN26G0171 Fragaria x ananassa
FAN26G3425 Fragaria x ananassa
FAN28G0013 Fragaria x ananassa
FAN28G0861 Fragaria x ananassa
FvH4_1g04960 Fragaria vesca
FvH4_1g27520 Fragaria vesca
FvH4_4g26190 Fragaria vesca
Glyma.02G292900 Glycine max
Glyma.02G293300 Glycine max
Gohir.A05G123100 Gossypium hirsutum
Gohir.A05G273300 Gossypium hirsutum
Gohir.D05G124000 Gossypium hirsutum
Gohir.D05G275700 Gossypium hirsutum
Gorai.002G181400 Gossypium raimondii
Gorai.009G128000 Gossypium raimondii
Gorai.009G288800 Gossypium raimondii
GSVIVG01025855001 Vitis vinifera
GSVIVG01028862001 Vitis vinifera
GSVIVG01028863001 Vitis vinifera
HanXRQChr10g0308101 Helianthus annuus
HanXRQChr17g0548851 Helianthus annuus
Haze_09675 Corylus avellana
Haze_09687 Corylus avellana
Haze_13900 Corylus avellana
Hma1.2p1_0016F.1_g010890 Hydrangea macrophylla
Hma1.2p1_0278F.1_g111890 Hydrangea macrophylla
HPP92_013244 Vanilla planifolia
HPP92_013245 Vanilla planifolia
HPP92_013254 Vanilla planifolia
HPP92_013255 Vanilla planifolia
Hund19062 Selenicereus undatus
Lalb_Chr04g0264151 Lupinus albus
Lalb_Chr04g0264161 Lupinus albus
Lj1A24G68 Lonicera japonica
Lj1C1079T5 Lonicera japonica
Lj2C730T10 Lonicera japonica
Lj3g0017551 Lotus japonicus
LjContig00238g0006541 Lotus japonicus
Lsat_1_v5_gn_9_99300 Lactuca sativa
Lsat_1_v5_gn_9_99320 Lactuca sativa
Manes.02G195200 Manihot esculenta
Manes.02G205100 Manihot esculenta
Mapoly0061s0023 Marchantia polymorpha
MBI01_g42407_MAGBIO Magnolia biondii
MBI03_g18675_MAGBIO Magnolia biondii
MCO07G651 Micromonas commoda
MD02G1048300 Malus domestica
MD15G1186600 Malus domestica
MD15G1186700 Malus domestica
MD15G1411000 Malus domestica
Medtr8g039590 Medicago truncatula
MELO3C012480.2 Cucumis melo
Migut.K00168 Erythranthe guttata
MSTRG.26188 Avicennia marina
Nitab4.5_0000123g0230 Nicotiana tabacum
Nitab4.5_0001270g0190 Nicotiana tabacum
Nitab4.5_0006880g0010 Nicotiana tabacum
Nitab4.5_0012379g0010 Nicotiana tabacum
Nitab4.5_0020143g0020 Nicotiana tabacum
Nn1g02901 Nelumbo nucifera
Oeu023005.1 Olea europaea
Oeu052243.2 Olea europaea
Oeu060760.2 Olea europaea
Os02g0116000 Oryza sativa ssp. japonica
Peaxi162Scf00324g00531 Petunia axillaris
Peaxi162Scf00538g00224 Petunia axillaris
Peaxi162Scf00991g00337 Petunia axillaris
PGR042G0103 Punica granatum
PGSC0003DMG400007202 Solanum tuberosum
Phvul.005G025300 Phaseolus vulgaris
Phvul.008G270400 Phaseolus vulgaris
Potri.013G108600 Populus trichocarpa
Potri.019G081100 Populus trichocarpa
Pp3c10_21500 Physcomitrium patens
Pp3c11_480 Physcomitrium patens
Pp3c3_5480 Physcomitrium patens
Pp3s124_90 Physcomitrium patens
Prupe.1G551600 Prunus persica
Prupe.4G066100 Prunus persica
Prupe.7G229900 Prunus persica
Psat5g221680 Pisum sativum
PSO339G0960 Papaver somniferum
PSO339G1610 Papaver somniferum
PSO384G3002 Papaver somniferum
QL09p005009 Quercus lobata
RcHm_v2.0_Chr1g0336331 Rosa chinensis
RcHm_v2.0_Chr2g0090581 Rosa chinensis
RcHm_v2.0_Chr2g0090591 Rosa chinensis
RcHm_v2.0_Chr2g0120581 Rosa chinensis
RcHm_v2.0_Chr5g0055971 Rosa chinensis
RcHm_v2.0_Chr6g0290001 Rosa chinensis
RcHm_v2.0_Chr7g0228681 Rosa chinensis
RcHm_v2.0_Chr7g0228711 Rosa chinensis
RcHm_v2.0_Chr7g0228721 Rosa chinensis
RcHm_v2.0_Chr7g0228771 Rosa chinensis
Rhsim06G0030700 Rhododendron simsii
Sabra13G0093800 Salix brachista
Sabra13G0093900 Salix brachista
Sabra19G0092000 Salix brachista
SalBow1G3093 Salvia bowleyana
SalBow1G3749 Salvia bowleyana
Sc13g0000820 Simmondsia chinensis
Sc25g0005590 Simmondsia chinensis
Sed0001108 Sechium edule
Sed0001197 Sechium edule
SEGI_08706 Sequoiadendron giganteum
SEGI_28277 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30554 Striga asiatica
SGA_v2.0_scaffold413G51179 Striga asiatica
SMO203G0254 Selaginella moellendorffii
Solyc10g077110.1 Solanum lycopersicum
Sopen10g028790 Solanum pennellii
Sp3g26870 Schrenkiella parvula
Sp5g27120 Schrenkiella parvula
TAR402G0006 Trochodendron aralioides
TAR636G3452 Trochodendron aralioides
TAR636G3586 Trochodendron aralioides
THA.LOC104800122 Tarenaya hassleriana
THA.LOC104818694 Tarenaya hassleriana
Thecc.08G187200 Theobroma cacao
Thhalv10018661m.g Eutrema salsugineum
TPR.G1421 Trifolium pratense
TPR.G22518 Trifolium pratense
TWI18G0703 Tripterygium wilfordii
TWI60G0704 Tripterygium wilfordii
unitig_0.g2667 Utricularia gibba
vmacro21662 Vaccinium macrocarpon
VMungo0647G0944 Vigna mungo
VMungo1080G1725 Vigna mungo
Zm00001eb265630 Zea mays
Zm00001eb353990 Zea mays

User provided reference genes

Program Settings