Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG10G14410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2486 Anthoceros agrestis
Actinidia08415 Actinidia chinensis
Actinidia08416 Actinidia chinensis
Actinidia21476 Actinidia chinensis
Actinidia32029 Actinidia chinensis
Actinidia39167 Actinidia chinensis
Ah.01g023230 Amaranthus hybridus
Ah.14g082270 Amaranthus hybridus
AL6G34890 Arabidopsis lyrata
Aqoxy2G02472 Aquilegia oxysepala
Aqoxy3G00398 Aquilegia oxysepala
Aqoxy6G01979 Aquilegia oxysepala
Aqoxy6G02792 Aquilegia oxysepala
Aqoxy7G02828 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LP37DI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJ1SRC Arachis hypogaea
AT5G23590 Arabidopsis thaliana
ATR0661G016 Amborella trichopoda
Atru.chr2.1615 Acer truncatum
AUR62010012 Chenopodium quinoa
AUR62010208 Chenopodium quinoa
AUR62013002 Chenopodium quinoa
AUR62013489 Chenopodium quinoa
AUR62015153 Chenopodium quinoa
BcaC03g18019 Brassica carinata
BcaC03g18020 Brassica carinata
BcaNung05203 Brassica carinata
BolC2t12132H Brassica oleracea
BolC7t44923H Brassica oleracea
BraA02t09036Z Brassica rapa
BraA06t26383Z Brassica rapa
C02p60790 Brassica napus
C07p43950 Brassica napus
CAN.G475.3 Capsicum annuum
CAN.G756.31 Capsicum annuum
CANSAT25G2722 Cannabis sativa
CANSAT78G0282 Cannabis sativa
CANSAT80G1118 Cannabis sativa
CARHR189980 Cardamine hirsuta
Carub.0005s1712 Capsella rubella
Carub.0006s2137 Capsella rubella
Ca_03297_v3 Cicer arietinum L.
Cc09_g10310 Coffea canephora
CDE02G2638 Ceratophyllum demersum
CDE09G1210 Ceratophyllum demersum
Cfa023788 Carpinus fangiana
Ciclev10030221m.g Citrus clementina
CiPaw.01G132000 Carya illinoinensis
CiPaw.02G071300 Carya illinoinensis
ClCG02G003910 Citrullus lanatus
COL.COLO4_17374 Corchorus olitorius
COL.COLO4_32987 Corchorus olitorius
Cpa.g.sc14.232 Carica papaya
Cpa.g.sc14.233 Carica papaya
Cre07.g348900 Chlamydomonas reinhardtii
CsaV3_7G001220 Cucumis sativus L.
CSS0005739 Camellia sinensis var. sinensis
CSS0021302 Camellia sinensis var. sinensis
CSS0039474 Camellia sinensis var. sinensis
CSS0045143 Camellia sinensis var. sinensis
CSS0049142 Camellia sinensis var. sinensis
DCAR_014082 Daucus carota
DCAR_020020 Daucus carota
DCAR_020880 Daucus carota
DCAR_022799 Daucus carota
DCAR_029118 Daucus carota
DCAR_029977 Daucus carota
Dinv40527 Davidia involucrata
Dinv41919 Davidia involucrata
Duzib052G0361 Durio zibethinus
ECA234G0462 Erigeron canadensis
ECA236G3931 Erigeron canadensis
ECA240G2719 Erigeron canadensis
EL10Ac6g13967 Beta vulgaris
EL10Ac9g21341 Beta vulgaris
Eucgr.G01791 Eucalyptus grandis
Eucgr.L03152 Eucalyptus grandis
FAN02G1177 Fragaria x ananassa
FAN02G3834 Fragaria x ananassa
FAN05G0168 Fragaria x ananassa
FAN05G2449 Fragaria x ananassa
FAN05G2525 Fragaria x ananassa
FAN05G3028 Fragaria x ananassa
FAN05G5388 Fragaria x ananassa
FAN07G2467 Fragaria x ananassa
FAN08G2673 Fragaria x ananassa
FAN09G1988 Fragaria x ananassa
FAN09G3057 Fragaria x ananassa
FAN09G3405 Fragaria x ananassa
FAN11G1820 Fragaria x ananassa
FAN11G2297 Fragaria x ananassa
FAN11G3129 Fragaria x ananassa
FAN12G2403 Fragaria x ananassa
FAN12G2867 Fragaria x ananassa
FAN13G2513 Fragaria x ananassa
FAN14G0526 Fragaria x ananassa
FAN14G2238 Fragaria x ananassa
FAN14G3468 Fragaria x ananassa
FAN14G4574 Fragaria x ananassa
FAN14G4919 Fragaria x ananassa
FAN14G5171 Fragaria x ananassa
FAN16G1234 Fragaria x ananassa
FAN17G2581 Fragaria x ananassa
FAN18G0678 Fragaria x ananassa
FAN19G1977 Fragaria x ananassa
FAN20G1288 Fragaria x ananassa
FAN21G0422 Fragaria x ananassa
FAN21G2867 Fragaria x ananassa
FAN23G2561 Fragaria x ananassa
FAN24G0024 Fragaria x ananassa
FAN24G0405 Fragaria x ananassa
FAN26G0110 Fragaria x ananassa
FAN26G1946 Fragaria x ananassa
FAN28G1504 Fragaria x ananassa
FvH4_1g17320 Fragaria vesca
FvH4_1g17321 Fragaria vesca
FvH4_2g15640 Fragaria vesca
FvH4_2g26761 Fragaria vesca
FvH4_3g06550 Fragaria vesca
FvH4_3g08271 Fragaria vesca
FvH4_3g08280 Fragaria vesca
FvH4_3g23920 Fragaria vesca
FvH4_5g36760 Fragaria vesca
FvH4_6g03220 Fragaria vesca
FvH4_6g03710 Fragaria vesca
FvH4_6g03780 Fragaria vesca
FvH4_6g22510 Fragaria vesca
FvH4_6g40672 Fragaria vesca
FvH4_6g40673 Fragaria vesca
Glyma.10G283300 Glycine max
Glyma.20G106400 Glycine max
Gohir.A01G170400 Gossypium hirsutum
Gohir.D01G161400 Gossypium hirsutum
Gorai.002G200100 Gossypium raimondii
GSVIVG01037045001 Vitis vinifera
HanXRQChr02g0035631 Helianthus annuus
HanXRQChr10g0298091 Helianthus annuus
Haze_00809 Corylus avellana
Hma1.2p1_0032F.1_g019220 Hydrangea macrophylla
Hma1.2p1_0163F.1_g072700 Hydrangea macrophylla
HPP92_007329 Vanilla planifolia
Hund00013 Selenicereus undatus
Hund16712 Selenicereus undatus
Lalb_Chr06g0163731 Lupinus albus
Lj5g0004060 Lotus japonicus
Lj5P177T42 Lonicera japonica
Lsat_1_v5_gn_4_71980 Lactuca sativa
Lsat_1_v5_gn_4_72000 Lactuca sativa
Manes.15G059200 Manihot esculenta
Mapoly0015s0100 Marchantia polymorpha
MBI07_g07805_MAGBIO Magnolia biondii
MCO05G385 Micromonas commoda
MD05G1124900 Malus domestica
MD10G1127700 Malus domestica
Medtr1g112910 Medicago truncatula
MELO3C013333.2 Cucumis melo
Migut.N01332 Erythranthe guttata
MSTRG.27630 Avicennia marina
Nitab4.5_0000563g0090 Nicotiana tabacum
Nitab4.5_0002341g0030 Nicotiana tabacum
Nn5g27768 Nelumbo nucifera
Oeu028963.1 Olea europaea
Os03g0136800 Oryza sativa ssp. japonica
Peaxi162Scf00444g00017 Petunia axillaris
Peaxi162Scf00793g00345 Petunia axillaris
PGR042G3155 Punica granatum
PGSC0003DMG400009335 Solanum tuberosum
PGSC0003DMG400015012 Solanum tuberosum
PGSC0003DMG400045980 Solanum tuberosum
PGSC0003DMG401001724 Solanum tuberosum
PGSC0003DMG401018151 Solanum tuberosum
Phvul.007G017900 Phaseolus vulgaris
Potri.009G138100 Populus trichocarpa
Pp3c8_9650 Physcomitrium patens
PRCOL_00003164 Prasinoderma coloniale
Prupe.8G168900 Prunus persica
Psat6g232680 Pisum sativum
PSO135G0399 Papaver somniferum
PSO210G5475 Papaver somniferum
PSO223G0032 Papaver somniferum
PSO223G0054 Papaver somniferum
PSO223G0083 Papaver somniferum
PSO339G5273 Papaver somniferum
PSO541G2003 Papaver somniferum
PSO675G0341 Papaver somniferum
PSO675G3506 Papaver somniferum
PSO732G0110 Papaver somniferum
QL11p052350 Quercus lobata
RcHm_v2.0_Chr6g0278841 Rosa chinensis
Rhsim01G0025300 Rhododendron simsii
Rhsim01G0060400 Rhododendron simsii
Sabra09G0107000 Salix brachista
Sc14g0002330 Simmondsia chinensis
Sed0012540 Sechium edule
Sed0021457 Sechium edule
SEGI_04117 Sequoiadendron giganteum
SEGI_06864 Sequoiadendron giganteum
SGA_v2.0_scaffold195G40810 Striga asiatica
SGA_v2.0_scaffold207G41938 Striga asiatica
SHI04584 Sapria himalayana
SMO364G0026 Selaginella moellendorffii
Solyc01g088730.3 Solanum lycopersicum
Solyc04g015090.3 Solanum lycopersicum
Solyc12g056890.1 Solanum lycopersicum
Sopen01g035570 Solanum pennellii
Sopen04g007110 Solanum pennellii
Sp2g23600 Schrenkiella parvula
TAR376G0768 Trochodendron aralioides
TAR625G0403 Trochodendron aralioides
THA.LOC104819658 Tarenaya hassleriana
Thecc.02G055800 Theobroma cacao
Thhalv10004704m.g Eutrema salsugineum
TPR.G2486 Trifolium pratense
TWI60G0855 Tripterygium wilfordii
unitig_746.g26872 Utricularia gibba
vmacro13056 Vaccinium macrocarpon
VMungo0720G1452 Vigna mungo
Zm00001eb002940 Zea mays

User provided reference genes

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