Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02110 Brassica napus
Aa31sc576G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis
Actinidia04959 Actinidia chinensis
Actinidia04960 Actinidia chinensis
Actinidia33038 Actinidia chinensis
AL6G24300 Arabidopsis lyrata
Aqoxy3G03116 Aquilegia oxysepala
Aqoxy4G00031 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7YSS56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYUF54 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P53GXH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea
AT5G13690 Arabidopsis thaliana
ATR0626G097 Amborella trichopoda
ATR0712G088 Amborella trichopoda
ATR0712G126 Amborella trichopoda
Atru.chr11.2581 Acer truncatum
Atru.chr9.2402 Acer truncatum
AUR62009404 Chenopodium quinoa
AUR62023087 Chenopodium quinoa
AUR62029809 Chenopodium quinoa
BcaC04g24265 Brassica carinata
BcaNung04192 Brassica carinata
BolC2t06579H Brassica oleracea
BraA02t05183Z Brassica rapa
C02p06360 Brassica napus
CAN.G219.63 Capsicum annuum
CAN.G853.14 Capsicum annuum
CAN.G853.15 Capsicum annuum
CANSAT11G1746 Cannabis sativa
CANSAT80G1880 Cannabis sativa
CARHR199750 Cardamine hirsuta
Carub.0006s1185 Capsella rubella
Ca_14529_v3 Cicer arietinum L.
Ca_16209_v3 Cicer arietinum L.
Cc02_g29010 Coffea canephora
Cc04_g12970 Coffea canephora
CDE07G0712 Ceratophyllum demersum
CDE11G0015 Ceratophyllum demersum
CDE11G0497 Ceratophyllum demersum
CDE11G1116 Ceratophyllum demersum
Cfa010802 Carpinus fangiana
Ciclev10018883m.g Citrus clementina
Ciclev10030724m.g Citrus clementina
CiPaw.13G007600 Carya illinoinensis
CiPaw.14G002300 Carya illinoinensis
ClCG06G016700 Citrullus lanatus
ClCG09G003910 Citrullus lanatus
COL.COLO4_04878 Corchorus olitorius
COL.COLO4_21430 Corchorus olitorius
Cpa.g.sc125.32 Carica papaya
Cpa.g.sc35.39 Carica papaya
Cpa.g.sc35.41 Carica papaya
Cpa.g.sc35.44 Carica papaya
CsaV3_1G001810 Cucumis sativus L.
CsaV3_7G030810 Cucumis sativus L.
CSS0008603 Camellia sinensis var. sinensis
CSS0022012 Camellia sinensis var. sinensis
CSS0027617 Camellia sinensis var. sinensis
DCAR_003225 Daucus carota
DCAR_026104 Daucus carota
Dinv20699 Davidia involucrata
Dinv43414 Davidia involucrata
Duzib133G0610 Durio zibethinus
Duzib205G0437 Durio zibethinus
ECA232G0870 Erigeron canadensis
ECA234G0904 Erigeron canadensis
EL10Ac2g04355 Beta vulgaris
Eucgr.B00338 Eucalyptus grandis
Eucgr.G03358 Eucalyptus grandis
Eucgr.J01382 Eucalyptus grandis
FAN01G1325 Fragaria x ananassa
FAN01G3156 Fragaria x ananassa
FAN06G3340 Fragaria x ananassa
FAN08G2581 Fragaria x ananassa
FAN10G2435 Fragaria x ananassa
FAN13G2511 Fragaria x ananassa
FAN18G1370 Fragaria x ananassa
FvH4_5g16380 Fragaria vesca
FvH4_7g01470 Fragaria vesca
Glyma.04G178566 Glycine max
Glyma.04G178632 Glycine max
Glyma.06G186000 Glycine max
Glyma.10G091000 Glycine max
Gohir.A07G069566 Gossypium hirsutum
Gohir.A08G142900 Gossypium hirsutum
Gohir.D07G074200 Gossypium hirsutum
Gohir.D08G163800 Gossypium hirsutum
Gorai.001G078400 Gossypium raimondii
Gorai.004G170700 Gossypium raimondii
GSVIVG01007826001 Vitis vinifera
GSVIVG01032165001 Vitis vinifera
HanXRQChr09g0271861 Helianthus annuus
HanXRQChr09g0271871 Helianthus annuus
HanXRQChr09g0271881 Helianthus annuus
HanXRQChr16g0524981 Helianthus annuus
Haze_03156 Corylus avellana
Haze_07437 Corylus avellana
Hma1.2p1_0002F.1_g002830 Hydrangea macrophylla
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla
HPP92_012079 Vanilla planifolia
HPP92_012081 Vanilla planifolia
HPP92_012082 Vanilla planifolia
Hund06126 Selenicereus undatus
Lalb_Chr04g0263891 Lupinus albus
Lj1g0014859 Lotus japonicus
Lj3g0004567 Lotus japonicus
Lj7A574G60 Lonicera japonica
Lj7C574T11 Lonicera japonica
Lj9C454T4 Lonicera japonica
Lsat_1_v5_gn_4_32101 Lactuca sativa
Lsat_1_v5_gn_4_73520 Lactuca sativa
Manes.10G139100 Manihot esculenta
Manes.14G070200 Manihot esculenta
Mapoly0144s0027 Marchantia polymorpha
MBI14_g13279_MAGBIO Magnolia biondii
MBI14_g41235_MAGBIO Magnolia biondii
MBI17_g12872_MAGBIO Magnolia biondii
MCO16G065 Micromonas commoda
MD02G1306300 Malus domestica
MD07G1018500 Malus domestica
MD07G1018700 Malus domestica
MD14G1187100 Malus domestica
Medtr3g032980 Medicago truncatula
Medtr3g078410 Medicago truncatula
Medtr3g435710 Medicago truncatula
MELO3C017123.2 Cucumis melo
MELO3C023569.2 Cucumis melo
Migut.B01276 Erythranthe guttata
Migut.D01907 Erythranthe guttata
MSTRG.20565 Avicennia marina
MSTRG.4387 Avicennia marina
Nitab4.5_0000707g0160 Nicotiana tabacum
Nitab4.5_0000707g0170 Nicotiana tabacum
Nitab4.5_0000707g0180 Nicotiana tabacum
Nitab4.5_0003386g0030 Nicotiana tabacum
Nitab4.5_0008441g0010 Nicotiana tabacum
Nitab4.5_0008927g0020 Nicotiana tabacum
Nn7g36274 Nelumbo nucifera
Oeu018528.1 Olea europaea
Os04g0650900 Oryza sativa ssp. japonica
Peaxi162Scf00017g02524 Petunia axillaris
Peaxi162Scf00694g00124 Petunia axillaris
Peaxi162Scf00694g00125 Petunia axillaris
PGR031G0137 Punica granatum
PGR083G0248 Punica granatum
PGSC0003DMG400024584 Solanum tuberosum
Phvul.005G023300 Phaseolus vulgaris
Phvul.009G182100 Phaseolus vulgaris
Potri.009G058100 Populus trichocarpa
Potri.012G075932 Populus trichocarpa
Pp3c17_12040 Physcomitrium patens
Prupe.2G020300 Prunus persica
Prupe.5G179300 Prunus persica
Prupe.5G179500 Prunus persica
Psat0s489g0080 Pisum sativum
Psat1g044960 Pisum sativum
Psat1g045040 Pisum sativum
Psat1g118360 Pisum sativum
Psat1g118400 Pisum sativum
Psat1g147240 Pisum sativum
Psat1g205680 Pisum sativum
Psat1g210400 Pisum sativum
Psat5g211360 Pisum sativum
PSO063G0387 Papaver somniferum
PSO832G2904 Papaver somniferum
QL04p008931 Quercus lobata
QL04p009277 Quercus lobata
QL04p009329 Quercus lobata
QL04p009441 Quercus lobata
QL10p012342 Quercus lobata
RcHm_v2.0_Chr1g0317311 Rosa chinensis
RcHm_v2.0_Chr7g0179731 Rosa chinensis
RcHm_v2.0_Chr7g0179741 Rosa chinensis
Rhsim07G0058300 Rhododendron simsii
Rhsim08G0167900 Rhododendron simsii
Sabra09G0042700 Salix brachista
Sabra12G0054000 Salix brachista
Sabra12G0054100 Salix brachista
SalBow3G3123 Salvia bowleyana
SalBow5G4976 Salvia bowleyana
Sc10g0000230 Simmondsia chinensis
Sed0001972 Sechium edule
Sed0021395 Sechium edule
SEGI_13141 Sequoiadendron giganteum
SEGI_39203 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32756 Striga asiatica
SMO141G0099 Selaginella moellendorffii
Solyc01g087610.3 Solanum lycopersicum
Solyc03g113820.3 Solanum lycopersicum
Solyc03g113840.3 Solanum lycopersicum
Solyc03g150154.1 Solanum lycopersicum
Solyc12g035430.1 Solanum lycopersicum
Sopen01g034580 Solanum pennellii
Sopen03g032870 Solanum pennellii
Sopen03g032890 Solanum pennellii
Sp6g30330 Schrenkiella parvula
TAR629G2536 Trochodendron aralioides
TAR633G1226 Trochodendron aralioides
THA.LOC104809848 Tarenaya hassleriana
Thecc.01G407300 Theobroma cacao
Thecc.03G004100 Theobroma cacao
Thecc.03G004300 Theobroma cacao
Thhalv10012727m.g Eutrema salsugineum
TPR.G228 Trifolium pratense
TPR.G31478 Trifolium pratense
TPR.G33008 Trifolium pratense
TWI15G0194 Tripterygium wilfordii
TWI60G0203 Tripterygium wilfordii
unitig_61.g26361 Utricularia gibba
vmacro13692 Vaccinium macrocarpon
vmacro19356 Vaccinium macrocarpon
VMungo1080G0526 Vigna mungo
VMungo1309G0904 Vigna mungo
VMungo1309G2946 Vigna mungo
Zm00001eb068240 Zea mays
Zm00001eb394460 Zea mays

User provided reference genes

Program Settings