Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14690 Brassica napus
A06p05760 Brassica napus
A07p20860 Brassica napus
A08p34920 Brassica napus
A09p65700 Brassica napus
Aa31LG9G490 Aethionema arabicum
Aa31sc17G150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3604 Anthoceros agrestis
Actinidia27616 Actinidia chinensis
Actinidia27617 Actinidia chinensis
Actinidia27618 Actinidia chinensis
Actinidia28342 Actinidia chinensis
Ah.12g051980 Amaranthus hybridus
Ah.12g052000 Amaranthus hybridus
Ah.12g052020 Amaranthus hybridus
AL1G19340 Arabidopsis lyrata
AL7G47820 Arabidopsis lyrata
Aqoxy7G00197 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78DXCF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9S2WM4 Arachis hypogaea
AT1G08910 Arabidopsis thaliana
AT5G41580 Arabidopsis thaliana
ATR0721G124 Amborella trichopoda
Atru.chr9.2107 Acer truncatum
AUR62010758 Chenopodium quinoa
AUR62019759 Chenopodium quinoa
BcaB02g07884 Brassica carinata
BcaB03g13534 Brassica carinata
BcaB03g13535 Brassica carinata
BcaB06g27629 Brassica carinata
BcaB07g34111 Brassica carinata
BcaC02g08950 Brassica carinata
BcaC05g24746 Brassica carinata
BcaC07g41918 Brassica carinata
BcaC08g44538 Brassica carinata
BolC4t26449H Brassica oleracea
BolC5t29453H Brassica oleracea
BolC6t37186H Brassica oleracea
BolC8t48874H Brassica oleracea
BolC8t52504H Brassica oleracea
BraA04t17109Z Brassica rapa
BraA06t23787Z Brassica rapa
BraA07t29773Z Brassica rapa
BraA08t35403Z Brassica rapa
BraA09t41913Z Brassica rapa
C04p48560 Brassica napus
C05p06950 Brassica napus
C05p06960 Brassica napus
C06p20020 Brassica napus
C08p12330 Brassica napus
C08p49770 Brassica napus
C09p22820 Brassica napus
CAN.G792.73 Capsicum annuum
CANSAT21G0202 Cannabis sativa
CANSAT21G1093 Cannabis sativa
CARHR008810 Cardamine hirsuta
CARHR114310 Cardamine hirsuta
CARHR287630 Cardamine hirsuta
Carub.0001s0824 Capsella rubella
Carub.0007s3389 Capsella rubella
Ca_24533_v3 Cicer arietinum L.
CBR_g34629 Chara braunii
Cc02_g38610 Coffea canephora
Cc08_g15310 Coffea canephora
CDE10G1109 Ceratophyllum demersum
Cfa002220 Carpinus fangiana
Cfa003868 Carpinus fangiana
Cfa012251 Carpinus fangiana
Cfa023128 Carpinus fangiana
Ciclev10024541m.g Citrus clementina
CiPaw.01G067900 Carya illinoinensis
CiPaw.11G129400 Carya illinoinensis
CiPaw.12G088800 Carya illinoinensis
ClCG01G002310 Citrullus lanatus
COL.COLO4_08355 Corchorus olitorius
Cpa.g.c33497.2 Carica papaya
Cpa.g.sc201.10 Carica papaya
Cpa.g.sc201.12 Carica papaya
CsaV3_5G002370 Cucumis sativus L.
CSS0022485 Camellia sinensis var. sinensis
DCAR_000636 Daucus carota
DCAR_004609 Daucus carota
DCAR_025216 Daucus carota
Dinv37591 Davidia involucrata
Dinv38896 Davidia involucrata
Duzib205G0707 Durio zibethinus
ECA236G1529 Erigeron canadensis
ECA236G4268 Erigeron canadensis
ECA246G2781 Erigeron canadensis
EL10Ac5g12842 Beta vulgaris
Eucgr.E00782 Eucalyptus grandis
FAN04G2035 Fragaria x ananassa
FAN04G2118 Fragaria x ananassa
FAN08G3653 Fragaria x ananassa
FAN11G3071 Fragaria x ananassa
FAN11G3379 Fragaria x ananassa
FAN13G0863 Fragaria x ananassa
FAN18G3666 Fragaria x ananassa
FAN18G4078 Fragaria x ananassa
FvH4_5g03250 Fragaria vesca
FvH4_7g19990 Fragaria vesca
Glyma.01G222500 Glycine max
Glyma.11G020900 Glycine max
Gohir.A08G114000 Gossypium hirsutum
Gohir.D08G134400 Gossypium hirsutum
Gorai.004G137500 Gossypium raimondii
GSVIVG01019423001 Vitis vinifera
GSVIVG01026971001 Vitis vinifera
GSVIVG01026973001 Vitis vinifera
HanXRQChr04g0120811 Helianthus annuus
HanXRQChr06g0166221 Helianthus annuus
HanXRQChr11g0344401 Helianthus annuus
HanXRQChr13g0416081 Helianthus annuus
HanXRQChr17g0533861 Helianthus annuus
Haze_07799 Corylus avellana
Haze_08746 Corylus avellana
Haze_08748 Corylus avellana
Haze_08750 Corylus avellana
Haze_15568 Corylus avellana
Haze_25282 Corylus avellana
Hma1.2p1_0216F.1_g091120 Hydrangea macrophylla
HPP92_000528 Vanilla planifolia
HPP92_002884 Vanilla planifolia
HPP92_002895 Vanilla planifolia
Hund11431 Selenicereus undatus
Hund14263 Selenicereus undatus
Hund14265 Selenicereus undatus
Lalb_Chr09g0320801 Lupinus albus
Lj2A177T50 Lonicera japonica
LjContig00312_ERROPOS870357g0002156 Lotus japonicus
LjContig00312_ERROPOS870357g0013212 Lotus japonicus
Lsat_1_v5_gn_3_11501 Lactuca sativa
Lsat_1_v5_gn_6_84940 Lactuca sativa
Lsat_1_v5_gn_7_2680 Lactuca sativa
Manes.02G016600 Manihot esculenta
Mapoly0002s0236 Marchantia polymorpha
Mapoly0189s0021 Marchantia polymorpha
MBI01_g15047_MAGBIO Magnolia biondii
MBI07_g11721_MAGBIO Magnolia biondii
MBI12_g01744_MAGBIO Magnolia biondii
MBI18_g41292_MAGBIO Magnolia biondii
MD06G1091800 Malus domestica
MD14G1112600 Malus domestica
Medtr3g107340 Medicago truncatula
Medtr5g009920 Medicago truncatula
Medtr7g063200 Medicago truncatula
Medtr8g447390 Medicago truncatula
MELO3C005717.2 Cucumis melo
Migut.E01210 Erythranthe guttata
MSTRG.13862 Avicennia marina
Nitab4.5_0000915g0080 Nicotiana tabacum
Nitab4.5_0002231g0040 Nicotiana tabacum
Nitab4.5_0005339g0020 Nicotiana tabacum
Nitab4.5_0010695g0020 Nicotiana tabacum
Nitab4.5_0010695g0030 Nicotiana tabacum
Nn6g32462 Nelumbo nucifera
Oeu040820.1 Olea europaea
Oeu042365.1 Olea europaea
Os06g0164000 Oryza sativa ssp. japonica
Peaxi162Scf00020g01526 Petunia axillaris
Peaxi162Scf00102g01644 Petunia axillaris
Peaxi162Scf00102g01645 Petunia axillaris
PGR042G1679 Punica granatum
PGSC0003DMG400000196 Solanum tuberosum
PGSC0003DMG401005827 Solanum tuberosum
PGSC0003DMG402005827 Solanum tuberosum
Phvul.002G160400 Phaseolus vulgaris
Potri.003G133000 Populus trichocarpa
Pp3c25_1090 Physcomitrium patens
Prupe.5G107000 Prunus persica
Psat2g183920 Pisum sativum
Psat5g132840 Pisum sativum
Psat7g004040 Pisum sativum
PSO063G6388 Papaver somniferum
PSO170G3062 Papaver somniferum
PSO266G0003 Papaver somniferum
PSO266G0031 Papaver somniferum
PSO384G4225 Papaver somniferum
PSO384G4267 Papaver somniferum
PSO675G3142 Papaver somniferum
QL02p033293 Quercus lobata
QL02p033307 Quercus lobata
QL04p055623 Quercus lobata
QL93p0326_0020 Quercus lobata
RcHm_v2.0_Chr7g0196521 Rosa chinensis
Rhsim02G0236100 Rhododendron simsii
Sabra03G0095300 Salix brachista
SalBow8G1076 Salvia bowleyana
Sc01g0009900 Simmondsia chinensis
Sed0003885 Sechium edule
Sed0011553 Sechium edule
SEGI_20510 Sequoiadendron giganteum
SEGI_33305 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35901 Striga asiatica
SGA_v2.0_scaffold173G39132 Striga asiatica
SHI07074 Sapria himalayana
SMO116G0096 Selaginella moellendorffii
Solyc01g095130.4 Solanum lycopersicum
Solyc08g008130.4 Solanum lycopersicum
Solyc08g008140.3 Solanum lycopersicum
Sopen01g038920 Solanum pennellii
Sopen08g003990 Solanum pennellii
Sp1g07530 Schrenkiella parvula
Sp7g00460 Schrenkiella parvula
TAR375G0293 Trochodendron aralioides
TAR629G1012 Trochodendron aralioides
THA.LOC104809363 Tarenaya hassleriana
THA.LOC104823601 Tarenaya hassleriana
Thecc.03G287000 Theobroma cacao
Thhalv10007035m.g Eutrema salsugineum
Thhalv10027658m.g Eutrema salsugineum
TPR.G24280 Trifolium pratense
TPR.G24909 Trifolium pratense
TPR.G6616 Trifolium pratense
TWI14G1154 Tripterygium wilfordii
TWI59G0290 Tripterygium wilfordii
TWI81G0015 Tripterygium wilfordii
vmacro11412 Vaccinium macrocarpon
VMungo1215G2430 Vigna mungo
Zm00001eb375680 Zea mays

User provided reference genes

Program Settings