Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23180 Brassica napus
A05p16700 Brassica napus
A08p11210 Brassica napus
Aa31LG9G2760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3180 Anthoceros agrestis
Actinidia04495 Actinidia chinensis
Actinidia27515 Actinidia chinensis
Ah.01g008550 Amaranthus hybridus
AL3G37460 Arabidopsis lyrata
AL7G41570 Arabidopsis lyrata
Aqoxy5G00365 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NG2AS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4ME45Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.56V0C4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6YLS1K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7J7E83 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C3BFCA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EG5LEH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N70XSL Arachis hypogaea
AT4G14570 Arabidopsis thaliana
ATR0665G110 Amborella trichopoda
AUR62003125 Chenopodium quinoa
AUR62007946 Chenopodium quinoa
AUR62010057 Chenopodium quinoa
AUR62013049 Chenopodium quinoa
AUR62027936 Chenopodium quinoa
BcaB04g18243 Brassica carinata
BcaC07g37831 Brassica carinata
BcaC08g44280 Brassica carinata
BcaC09g50117 Brassica carinata
BcaNung00363 Brassica carinata
BolC1t02811H Brassica oleracea
BolC6t36899H Brassica oleracea
BolC8t48215H Brassica oleracea
BraA01t02227Z Brassica rapa
BraA05t20573Z Brassica rapa
BraA08t33117Z Brassica rapa
C01p28830 Brassica napus
C06p16990 Brassica napus
CAN.G1652.1 Capsicum annuum
CAN.G638.79 Capsicum annuum
CAN.G665.24 Capsicum annuum
CAN.G749.34 Capsicum annuum
CAN.G749.35 Capsicum annuum
CAN.G749.36 Capsicum annuum
CANSAT78G2141 Cannabis sativa
CARHR220780 Cardamine hirsuta
Carub.0003s2319 Capsella rubella
Carub.0007s2764 Capsella rubella
Carub.0210s0001 Capsella rubella
Ca_12210_v3 Cicer arietinum L.
Ca_12211_v3 Cicer arietinum L.
CBR_g47 Chara braunii
Cc03_g04630 Coffea canephora
CDE06G0682 Ceratophyllum demersum
Cfa008401 Carpinus fangiana
Cfa023991 Carpinus fangiana
Cfa024138 Carpinus fangiana
Cfa024496 Carpinus fangiana
Ciclev10004325m.g Citrus clementina
CiPaw.01G192600 Carya illinoinensis
ClCG06G006600 Citrullus lanatus
COL.COLO4_15763 Corchorus olitorius
COL.COLO4_15764 Corchorus olitorius
Cpa.g.c42693 Carica papaya
Cpa.g.c44588 Carica papaya
Cpa.g.sc58.17 Carica papaya
Cre05.g241650 Chlamydomonas reinhardtii
CsaV3_2G013240 Cucumis sativus L.
CSS0025557 Camellia sinensis var. sinensis
CSS0037722 Camellia sinensis var. sinensis
DCAR_027265 Daucus carota
DCAR_030706 Daucus carota
Dinv44609 Davidia involucrata
Duzib151G0985 Durio zibethinus
ECA233G5632 Erigeron canadensis
EL10Ac9g21398 Beta vulgaris
Eucgr.H00221 Eucalyptus grandis
Eucgr.H00222 Eucalyptus grandis
FAN07G2986 Fragaria x ananassa
FAN12G0712 Fragaria x ananassa
FAN12G2567 Fragaria x ananassa
FAN12G3229 Fragaria x ananassa
FAN12G3237 Fragaria x ananassa
FAN17G0901 Fragaria x ananassa
FAN17G1347 Fragaria x ananassa
FAN22G1146 Fragaria x ananassa
FvH4_4g01882 Fragaria vesca
FvH4_4g02060 Fragaria vesca
FvH4_4g02161 Fragaria vesca
FvH4_4g02162 Fragaria vesca
Glyma.10G001000 Glycine max
Glyma.10G001100 Glycine max
Glyma.19G028900 Glycine max
Gohir.A09G221900 Gossypium hirsutum
Gohir.D09G224000 Gossypium hirsutum
Gorai.006G245500 Gossypium raimondii
GSVIVG01001245001 Vitis vinifera
GSVIVG01005343001 Vitis vinifera
GSVIVG01018091001 Vitis vinifera
GSVIVG01021731001 Vitis vinifera
HanXRQChr12g0363751 Helianthus annuus
Haze_11267 Corylus avellana
HPP92_024855 Vanilla planifolia
HPP92_026600 Vanilla planifolia
HPP92_026601 Vanilla planifolia
Hund06426 Selenicereus undatus
Lalb_Chr01g0020821 Lupinus albus
Lalb_Chr03g0037631 Lupinus albus
Lalb_Chr03g0037641 Lupinus albus
Lalb_Chr03g0037931 Lupinus albus
Lalb_Chr03g0037941 Lupinus albus
Lj6C653G14 Lonicera japonica
Lj6C653G15 Lonicera japonica
Lj6g0000554 Lotus japonicus
Lj6g0015454 Lotus japonicus
Lj6g0018324 Lotus japonicus
Lsat_1_v5_gn_5_67880 Lactuca sativa
Lsat_1_v5_gn_5_67900 Lactuca sativa
Manes.03G170200 Manihot esculenta
Manes.15G035400 Manihot esculenta
Mapoly0111s0036 Marchantia polymorpha
MBI11_g15904_MAGBIO Magnolia biondii
MCO08G067 Micromonas commoda
MD13G1203600 Malus domestica
MD16G1205200 Malus domestica
MD16G1205300 Malus domestica
MD16G1205500 Malus domestica
MD16G1205600 Malus domestica
MD16G1205700 Malus domestica
Medtr1g040725 Medicago truncatula
Medtr1g053180 Medicago truncatula
Medtr5g042400 Medicago truncatula
Medtr5g042410 Medicago truncatula
MELO3C014268.2 Cucumis melo
Migut.G00413 Erythranthe guttata
MSTRG.9934 Avicennia marina
Nitab4.5_0001497g0060 Nicotiana tabacum
Nitab4.5_0001497g0100 Nicotiana tabacum
Nitab4.5_0001856g0030 Nicotiana tabacum
Nitab4.5_0001856g0040 Nicotiana tabacum
Nitab4.5_0004068g0010 Nicotiana tabacum
Nitab4.5_0007585g0020 Nicotiana tabacum
Nitab4.5_0007710g0050 Nicotiana tabacum
Nitab4.5_0012986g0020 Nicotiana tabacum
Nitab4.5_0013033g0020 Nicotiana tabacum
Nitab4.5_0019126g0020 Nicotiana tabacum
Nn1g02533 Nelumbo nucifera
Oeu064216.1 Olea europaea
Os10g0415800 Oryza sativa ssp. japonica
Peaxi162Scf00019g03119 Petunia axillaris
Peaxi162Scf00578g00525 Petunia axillaris
Peaxi162Scf00788g00312 Petunia axillaris
PGR142G2368 Punica granatum
PGR142G3261 Punica granatum
PGSC0003DMG400006106 Solanum tuberosum
PGSC0003DMG400013444 Solanum tuberosum
Phvul.006G013781 Phaseolus vulgaris
Phvul.007G279900 Phaseolus vulgaris
Phvul.007G280000 Phaseolus vulgaris
Potri.008G160400 Populus trichocarpa
Pp3c12_21080 Physcomitrium patens
Pp3c1_2590 Physcomitrium patens
Pp3c2_30720 Physcomitrium patens
Pp3c7_25140 Physcomitrium patens
PRCOL_00005468 Prasinoderma coloniale
Prupe.1G026800 Prunus persica
Psat0s4097g0040 Pisum sativum
Psat4g201800 Pisum sativum
Psat4g201840 Pisum sativum
Psat6g091880 Pisum sativum
Psat6g102200 Pisum sativum
Psat6g121960 Pisum sativum
Psat6g136360 Pisum sativum
PSO210G0990 Papaver somniferum
PSO210G1820 Papaver somniferum
PSO210G4228 Papaver somniferum
PSO210G4691 Papaver somniferum
PSO210G5858 Papaver somniferum
PSO832G4175 Papaver somniferum
QL06p014983 Quercus lobata
QL06p015015 Quercus lobata
RcHm_v2.0_Chr4g0389431 Rosa chinensis
RcHm_v2.0_Chr4g0389461 Rosa chinensis
Rhsim04G0195100 Rhododendron simsii
Sabra08G0122200 Salix brachista
Sabra08G0122300 Salix brachista
SalBow2G0949 Salvia bowleyana
SalBow2G2395 Salvia bowleyana
Sc25g0004170 Simmondsia chinensis
Sc25g0004180 Simmondsia chinensis
Sed0002710 Sechium edule
SEGI_24351 Sequoiadendron giganteum
SGA_v2.0_scaffold88G27334 Striga asiatica
SHI00568 Sapria himalayana
SHI00569 Sapria himalayana
SMO347G0435 Selaginella moellendorffii
Solyc03g005340.4 Solanum lycopersicum
Solyc09g083120.3 Solanum lycopersicum
Solyc09g083130.3 Solanum lycopersicum
Solyc09g150157.1 Solanum lycopersicum
Sopen03g001380 Solanum pennellii
Sopen09g032000 Solanum pennellii
Sopen09g032010 Solanum pennellii
Sp7g12660 Schrenkiella parvula
TAR633G0296 Trochodendron aralioides
THA.LOC104822254 Tarenaya hassleriana
Thecc.04G243500 Theobroma cacao
Thhalv10024477m.g Eutrema salsugineum
TPR.G22476 Trifolium pratense
TPR.G22486 Trifolium pratense
TPR.G28258 Trifolium pratense
TPR.G39892 Trifolium pratense
TWI09G1508 Tripterygium wilfordii
unitig_748.g8319 Utricularia gibba
vmacro08397 Vaccinium macrocarpon
VMungo0720G0109 Vigna mungo
VMungo0720G0420 Vigna mungo
Zm00001eb048000 Zea mays
Zm00001eb223050 Zea mays

User provided reference genes

Program Settings