Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p60500 Brassica napus
A09p40400 Brassica napus
A09p40410 Brassica napus
A09p40420 Brassica napus
Aa31LG2G19350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2833 Anthoceros agrestis
Actinidia10072 Actinidia chinensis
Actinidia30874 Actinidia chinensis
Actinidia30875 Actinidia chinensis
Actinidia30876 Actinidia chinensis
Actinidia35847 Actinidia chinensis
Actinidia36365 Actinidia chinensis
Ah.04g149340 Amaranthus hybridus
AL1G38530 Arabidopsis lyrata
AL1G39310 Arabidopsis lyrata
AL1G41060 Arabidopsis lyrata
AL3G41550 Arabidopsis lyrata
AL7G21090 Arabidopsis lyrata
Aqoxy5G00431 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea
AT4G30990 Arabidopsis thaliana
AT5G36722 Arabidopsis thaliana
AT5G36810 Arabidopsis thaliana
ATR0665G483 Amborella trichopoda
Atru.chr10.1944 Acer truncatum
Atru.chr4.1597 Acer truncatum
Atru.chr4.1598 Acer truncatum
AUR62018566 Chenopodium quinoa
AUR62020852 Chenopodium quinoa
BcaC05g26355 Brassica carinata
BcaC05g26356 Brassica carinata
BcaC05g26357 Brassica carinata
BcaC05g26358 Brassica carinata
BcaNung01550 Brassica carinata
BcaNung02730 Brassica carinata
BolC5t31099H Brassica oleracea
BolC5t31100H Brassica oleracea
BolC5t31124H Brassica oleracea
BolC5t31125H Brassica oleracea
BolC5t31132H Brassica oleracea
BolC7t46291H Brassica oleracea
BraA03t15089Z Brassica rapa
BraA09t39536Z Brassica rapa
BraA09t39537Z Brassica rapa
BraA09t39538Z Brassica rapa
BraA09t42180Z Brassica rapa
BraA09t42186Z Brassica rapa
C04p01850 Brassica napus
C05p23800 Brassica napus
C05p23810 Brassica napus
C05p23980 Brassica napus
C05p24020 Brassica napus
C05p24030 Brassica napus
C07p58370 Brassica napus
C08p53090 Brassica napus
CAN.G1155.21 Capsicum annuum
CANSAT78G0886 Cannabis sativa
CANSAT78G1406 Cannabis sativa
CANSAT78G1701 Cannabis sativa
CARHR024920 Cardamine hirsuta
CARHR238880 Cardamine hirsuta
CARHR255300 Cardamine hirsuta
Carub.0001s2398 Capsella rubella
Carub.0001s2400 Capsella rubella
Carub.0005s0720 Capsella rubella
Carub.0007s0955 Capsella rubella
Ca_07922_v3 Cicer arietinum L.
CBR_g75372 Chara braunii
Cc00_g09570 Coffea canephora
Cc00_g09580 Coffea canephora
Cc00_g09590 Coffea canephora
Cc00_g09600 Coffea canephora
Cc00_g09610 Coffea canephora
Cc00_g24200 Coffea canephora
Cc00_g24210 Coffea canephora
Cc00_g27540 Coffea canephora
Cc00_g27550 Coffea canephora
Cc00_g35730 Coffea canephora
CDE07G0216 Ceratophyllum demersum
CDE07G0754 Ceratophyllum demersum
CDE07G1385 Ceratophyllum demersum
Cfa009508 Carpinus fangiana
Cfa010533 Carpinus fangiana
Cfa025075 Carpinus fangiana
Ciclev10004117m.g Citrus clementina
CiPaw.14G076100 Carya illinoinensis
CiPaw.14G076400 Carya illinoinensis
ClCG06G007990 Citrullus lanatus
COL.COLO4_08386 Corchorus olitorius
COL.COLO4_08387 Corchorus olitorius
COL.COLO4_20215 Corchorus olitorius
COL.COLO4_33741 Corchorus olitorius
Cpa.g.c46004 Carica papaya
Cpa.g.sc83.35 Carica papaya
Cpa.g.sc83.36 Carica papaya
Cpa.g.sc83.40 Carica papaya
Cre10.g461000 Chlamydomonas reinhardtii
CsaV3_2G011790 Cucumis sativus L.
CSS0000754 Camellia sinensis var. sinensis
CSS0038204 Camellia sinensis var. sinensis
DCAR_007830 Daucus carota
Dinv16255 Davidia involucrata
Duzib212G0201 Durio zibethinus
ECA233G4989 Erigeron canadensis
EL10Ac3g07463 Beta vulgaris
Eucgr.H00030 Eucalyptus grandis
Eucgr.H00031 Eucalyptus grandis
FAN02G0145 Fragaria x ananassa
FAN05G1620 Fragaria x ananassa
FAN09G2094 Fragaria x ananassa
FAN14G0460 Fragaria x ananassa
FvH4_6g30710 Fragaria vesca
Glyma.18G016000 Glycine max
Gohir.A10G128200 Gossypium hirsutum
Gohir.D10G137700 Gossypium hirsutum
Gorai.011G152900 Gossypium raimondii
GSVIVG01021009001 Vitis vinifera
HanXRQChr17g0546471 Helianthus annuus
Haze_07640 Corylus avellana
Haze_07641 Corylus avellana
Haze_13685 Corylus avellana
Haze_18491 Corylus avellana
Haze_25244 Corylus avellana
Haze_25245 Corylus avellana
Haze_25344 Corylus avellana
Hma1.2p1_0039F.1_g024560 Hydrangea macrophylla
Hma1.2p1_0039F.1_g024570 Hydrangea macrophylla
Hma1.2p1_0039F.1_g024580 Hydrangea macrophylla
HPP92_007257 Vanilla planifolia
HPP92_007258 Vanilla planifolia
HPP92_007262 Vanilla planifolia
HPP92_007263 Vanilla planifolia
HPP92_007267 Vanilla planifolia
Hund11640 Selenicereus undatus
Hund16694 Selenicereus undatus
Hund19003 Selenicereus undatus
Hund29080 Selenicereus undatus
Hund29082 Selenicereus undatus
Lalb_Chr23g0269091 Lupinus albus
Lalb_Chr23g0269101 Lupinus albus
Lj6A385T56 Lonicera japonica
Lj6C385T7 Lonicera japonica
Lj6g0020396 Lotus japonicus
Lsat_1_v5_gn_6_59340 Lactuca sativa
Manes.15G056200 Manihot esculenta
Mapoly0054s0075 Marchantia polymorpha
MBI17_g03746_MAGBIO Magnolia biondii
MCO13G565 Micromonas commoda
MD17G1201300 Malus domestica
Medtr3g083970 Medicago truncatula
MELO3C020422.2 Cucumis melo
Migut.B01882 Erythranthe guttata
Nitab4.5_0000697g0090 Nicotiana tabacum
Nitab4.5_0012127g0010 Nicotiana tabacum
Nn4g23612 Nelumbo nucifera
Oeu002918.1 Olea europaea
Oeu043445.1 Olea europaea
Oeu043446.1 Olea europaea
Oeu049761.1 Olea europaea
Os01g0584800 Oryza sativa ssp. japonica
Peaxi162Scf00047g00136 Petunia axillaris
PGR119G1374 Punica granatum
PGSC0003DMG400007741 Solanum tuberosum
PGSC0003DMG400007745 Solanum tuberosum
PGSC0003DMG400026434 Solanum tuberosum
Phvul.001G253000 Phaseolus vulgaris
Potri.001G318800 Populus trichocarpa
Pp3c3_18970 Physcomitrium patens
PRCOL_00001334 Prasinoderma coloniale
Prupe.3G074200 Prunus persica
Prupe.3G077100 Prunus persica
Psat0s3058g0040 Pisum sativum
Psat3g191280 Pisum sativum
Psat4g000280 Pisum sativum
Psat4g000360 Pisum sativum
PSO210G2420 Papaver somniferum
PSO832G1670 Papaver somniferum
QL04p081909 Quercus lobata
RcHm_v2.0_Chr2g0136151 Rosa chinensis
RcHm_v2.0_Chr2g0137101 Rosa chinensis
RcHm_v2.0_Chr2g0155431 Rosa chinensis
Rhsim02G0023500 Rhododendron simsii
Rhsim06G0083800 Rhododendron simsii
Rhsim07G0171100 Rhododendron simsii
Rhsim07G0171200 Rhododendron simsii
Rhsim07G0171500 Rhododendron simsii
Rhsim09G0059200 Rhododendron simsii
Sabra16G0201800 Salix brachista
SalBow3G3081 Salvia bowleyana
Sc25g0005820 Simmondsia chinensis
Sed0014363 Sechium edule
SEGI_02895 Sequoiadendron giganteum
SEGI_04472 Sequoiadendron giganteum
SEGI_06154 Sequoiadendron giganteum
SEGI_12321 Sequoiadendron giganteum
SEGI_28450 Sequoiadendron giganteum
SGA_v2.0_scaffold5G03024 Striga asiatica
SHI16728 Sapria himalayana
SMO164G0231 Selaginella moellendorffii
Solyc09g092240.3 Solanum lycopersicum
Sopen09g035170 Solanum pennellii
Sp7g28860 Schrenkiella parvula
TAR636G1491 Trochodendron aralioides
THA.LOC104808700 Tarenaya hassleriana
Thecc.04G196300 Theobroma cacao
Thhalv10009353m.g Eutrema salsugineum
Thhalv10024182m.g Eutrema salsugineum
TPR.G14701 Trifolium pratense
TPR.G14704 Trifolium pratense
TPR.G31177 Trifolium pratense
TPR.G7141 Trifolium pratense
TPR.G860 Trifolium pratense
TWI56G0473 Tripterygium wilfordii
unitig_578.g16273 Utricularia gibba
vmacro00444 Vaccinium macrocarpon
VMungo1383G2293 Vigna mungo
Zm00001eb092010 Zea mays
Zm00001eb121880 Zea mays
Zm00001eb154910 Zea mays

User provided reference genes

Program Settings