Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14770 Brassica napus
A05p44390 Brassica napus
A07p22170 Brassica napus
Aa31LG10G12990 Aethionema arabicum
Aa31LG5G13190 Aethionema arabicum
Aa31LG5G20820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.503 Anthoceros agrestis
Actinidia17153 Actinidia chinensis
Actinidia40401 Actinidia chinensis
Actinidia40402 Actinidia chinensis
Ah.04g162920 Amaranthus hybridus
Ah.06g191490 Amaranthus hybridus
AL3G12120 Arabidopsis lyrata
AL3G15030 Arabidopsis lyrata
AL4G36160 Arabidopsis lyrata
AL5G35680 Arabidopsis lyrata
Aqoxy3G04195 Aquilegia oxysepala
Aqoxy5G00372 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3U7LNL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BWH72M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0EB6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MLE48V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4H5CG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5NPNE Arachis hypogaea
AT2G38860 Arabidopsis thaliana
AT3G02720 Arabidopsis thaliana
AT3G54600 Arabidopsis thaliana
ATR0618G319 Amborella trichopoda
Atru.chr1.1980 Acer truncatum
Atru.chr1.1982 Acer truncatum
Atru.chr5.1553 Acer truncatum
Atru.chr6.1235 Acer truncatum
Atru.chr6.1236 Acer truncatum
AUR62004752 Chenopodium quinoa
AUR62037502 Chenopodium quinoa
BcaB02g07730 Brassica carinata
BcaC02g08940 Brassica carinata
BcaC02g12865 Brassica carinata
BcaC02g12871 Brassica carinata
BcaC05g30515 Brassica carinata
BcaC08g44689 Brassica carinata
BolC4t26458H Brassica oleracea
BolC5t35072H Brassica oleracea
BolC6t37410H Brassica oleracea
BraA04t17114Z Brassica rapa
BraA06t23295Z Brassica rapa
BraA07t29900Z Brassica rapa
C04p48680 Brassica napus
C06p22250 Brassica napus
C09p75840 Brassica napus
C09p75850 Brassica napus
CAN.G809.97 Capsicum annuum
CANSAT54G1103 Cannabis sativa
CARHR076720 Cardamine hirsuta
CARHR133580 Cardamine hirsuta
CARHR164500 Cardamine hirsuta
Carub.0003s0182 Capsella rubella
Carub.0004s2088 Capsella rubella
Carub.0005s2120 Capsella rubella
Ca_15114_v3 Cicer arietinum L.
CBR_g29737 Chara braunii
Cc07_g12660 Coffea canephora
CDE04G1699 Ceratophyllum demersum
Cfa007732 Carpinus fangiana
Cfa007734 Carpinus fangiana
Cfa025554 Carpinus fangiana
Ciclev10011868m.g Citrus clementina
CiPaw.03G079900 Carya illinoinensis
CiPaw.03G080000 Carya illinoinensis
ClCG10G010710 Citrullus lanatus
ClCG10G010720 Citrullus lanatus
COL.COLO4_06091 Corchorus olitorius
Cpa.g.c35570.1 Carica papaya
Cpa.g.sc1042.1 Carica papaya
Cpa.g.sc1042.2 Carica papaya
Cpa.g.sc1042.3 Carica papaya
Cpa.g.sc2658.1 Carica papaya
Cpa.g.sc2658.2 Carica papaya
Cpa.g.sc2658.3 Carica papaya
Cpa.g.sc52.104 Carica papaya
CsaV3_4G000590 Cucumis sativus L.
CSS0001037 Camellia sinensis var. sinensis
CSS0046671 Camellia sinensis var. sinensis
Dinv19091 Davidia involucrata
Duzib138G0272 Durio zibethinus
Duzib138G0872 Durio zibethinus
ECA232G0278 Erigeron canadensis
ECA232G3588 Erigeron canadensis
EL10Ac4g08907 Beta vulgaris
EL10Ac4g08908 Beta vulgaris
Eucgr.C03234 Eucalyptus grandis
Eucgr.E00619 Eucalyptus grandis
Eucgr.F02918 Eucalyptus grandis
Eucgr.H01637 Eucalyptus grandis
Eucgr.J00709 Eucalyptus grandis
Eucgr.K00255 Eucalyptus grandis
FAN01G0422 Fragaria x ananassa
FAN06G1296 Fragaria x ananassa
FAN10G1472 Fragaria x ananassa
FAN26G1466 Fragaria x ananassa
FAN28G2527 Fragaria x ananassa
FvH4_1g27590 Fragaria vesca
FvH4_7g05680 Fragaria vesca
Glyma.18G045900 Glycine max
Glyma.18G046000 Glycine max
Gohir.A07G074500 Gossypium hirsutum
Gohir.A11G126600 Gossypium hirsutum
Gohir.D07G079200 Gossypium hirsutum
Gohir.D11G132100 Gossypium hirsutum
Gorai.001G083800 Gossypium raimondii
Gorai.007G141300 Gossypium raimondii
GSVIVG01035277001 Vitis vinifera
HanXRQChr15g0493441 Helianthus annuus
Haze_14340 Corylus avellana
Haze_14342 Corylus avellana
Haze_14348 Corylus avellana
Hma1.2p1_2393F.1_g321250 Hydrangea macrophylla
HPP92_025843 Vanilla planifolia
Hund22217 Selenicereus undatus
Lalb_Chr15g0085371 Lupinus albus
Lalb_Chr17g0345831 Lupinus albus
Lj4A250T92 Lonicera japonica
Lj6g0000809 Lotus japonicus
LjContig00141g0026358 Lotus japonicus
Lsat_1_v5_gn_4_136981 Lactuca sativa
Lsat_1_v5_gn_4_137160 Lactuca sativa
Lsat_1_v5_gn_4_137221 Lactuca sativa
Manes.01G124600 Manihot esculenta
Manes.01G202400 Manihot esculenta
Manes.01G202500 Manihot esculenta
Mapoly0027s0097 Marchantia polymorpha
MBI03_g37598_MAGBIO Magnolia biondii
MBI03_g47434_MAGBIO Magnolia biondii
MBI11_g33856_MAGBIO Magnolia biondii
MD09G1281500 Malus domestica
MD09G1281600 Malus domestica
MD09G1281700 Malus domestica
Medtr3g064093 Medicago truncatula
Medtr3g064115 Medicago truncatula
Medtr3g064140 Medicago truncatula
MELO3C017976.2 Cucumis melo
Migut.K00982 Erythranthe guttata
MSTRG.15623 Avicennia marina
Nitab4.5_0000483g0120 Nicotiana tabacum
Nitab4.5_0003412g0010 Nicotiana tabacum
Nn3g19489 Nelumbo nucifera
Nn4g24841 Nelumbo nucifera
Oeu002680.1 Olea europaea
Oeu018190.1 Olea europaea
Os04g0671700 Oryza sativa ssp. japonica
Os11g0591550 Oryza sativa ssp. japonica
Peaxi162Scf00344g00202 Petunia axillaris
PGR004G2537 Punica granatum
PGSC0003DMG400019717 Solanum tuberosum
Phvul.006G085000 Phaseolus vulgaris
Potri.004G075900 Populus trichocarpa
Potri.004G076000 Populus trichocarpa
Potri.004G076200 Populus trichocarpa
Potri.017G143880 Populus trichocarpa
Potri.017G143940 Populus trichocarpa
Pp3c10_15130 Physcomitrium patens
Pp3s30_990 Physcomitrium patens
Pp3s32_650 Physcomitrium patens
Prupe.3G012200 Prunus persica
Prupe.3G012300 Prunus persica
Prupe.3G012400 Prunus persica
Prupe.3G012600 Prunus persica
Prupe.3G012800 Prunus persica
Prupe.3G012900 Prunus persica
Prupe.3G022000 Prunus persica
Psat5g143120 Pisum sativum
PSO063G5015 Papaver somniferum
PSO210G3841 Papaver somniferum
PSO478G0679 Papaver somniferum
PSO675G5128 Papaver somniferum
PSO782G1600 Papaver somniferum
PSO832G0966 Papaver somniferum
QL06p023771 Quercus lobata
RcHm_v2.0_Chr3g0487821 Rosa chinensis
RcHm_v2.0_Chr3g0487831 Rosa chinensis
RcHm_v2.0_Chr3g0487841 Rosa chinensis
RcHm_v2.0_Chr3g0487891 Rosa chinensis
RcHm_v2.0_Chr3g0487941 Rosa chinensis
RcHm_v2.0_Chr3g0487981 Rosa chinensis
RcHm_v2.0_Chr3g0488171 Rosa chinensis
Rhsim10G0186400 Rhododendron simsii
Rhsim10G0186500 Rhododendron simsii
Sabra04G0050700 Salix brachista
Sabra17G0120200 Salix brachista
SalBow5G2515 Salvia bowleyana
Sc03g0004930 Simmondsia chinensis
Sc06g0003030 Simmondsia chinensis
Sed0026521 Sechium edule
SEGI_12307 Sequoiadendron giganteum
SEGI_24172 Sequoiadendron giganteum
SEGI_37003 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32033 Striga asiatica
SMO144G0171 Selaginella moellendorffii
Solyc02g081400.3 Solanum lycopersicum
Sopen02g026030 Solanum pennellii
Sp3g01750 Schrenkiella parvula
Sp4g21240 Schrenkiella parvula
Sp5g07860 Schrenkiella parvula
TAR629G1893 Trochodendron aralioides
THA.LOC104802426 Tarenaya hassleriana
THA.LOC104824175 Tarenaya hassleriana
THA.LOC104824176 Tarenaya hassleriana
Thecc.01G268700 Theobroma cacao
Thecc.04G055500 Theobroma cacao
Thhalv10010428m.g Eutrema salsugineum
Thhalv10016752m.g Eutrema salsugineum
Thhalv10021062m.g Eutrema salsugineum
TWI12G0667 Tripterygium wilfordii
TWI74G0554 Tripterygium wilfordii
unitig_748.g7018 Utricularia gibba
unitig_748.g7019 Utricularia gibba
vmacro20449 Vaccinium macrocarpon
vmacro20450 Vaccinium macrocarpon
VMungo0540G1612 Vigna mungo
Zm00001eb066660 Zea mays

User provided reference genes

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