Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39620 Brassica napus
A06p46990 Brassica napus
A09p21270 Brassica napus
A09p29000 Brassica napus
Aa31LG9G8450 Aethionema arabicum
Aa31sc456G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2820 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.550 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.279 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.285 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.314 Anthoceros agrestis
Actinidia33648 Actinidia chinensis
Ah.08g218200 Amaranthus hybridus
AL1G45200 Arabidopsis lyrata
AL8G14810 Arabidopsis lyrata
Aqoxy4G00011 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4IPC1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1QZC1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QDY45T Arachis hypogaea
AT1G30910 Arabidopsis thaliana
AT5G44720 Arabidopsis thaliana
ATR0763G182 Amborella trichopoda
Atru.chr10.222 Acer truncatum
Atru.chr10.286 Acer truncatum
Atru.chr10.290 Acer truncatum
Atru.chr10.654 Acer truncatum
Atru.chr12.1132 Acer truncatum
AUR62008776 Chenopodium quinoa
AUR62025463 Chenopodium quinoa
BcaB01g01432 Brassica carinata
BcaB07g30928 Brassica carinata
BcaB07g30929 Brassica carinata
BcaC04g20996 Brassica carinata
BcaC04g21819 Brassica carinata
BcaC04g21820 Brassica carinata
BcaC06g31589 Brassica carinata
BcaC06g31591 Brassica carinata
BcaC06g34511 Brassica carinata
BcaC06g34519 Brassica carinata
BolC7t43294H Brassica oleracea
BolC7t43300H Brassica oleracea
BolC9t55590H Brassica oleracea
BolC9t55591H Brassica oleracea
BolC9t56516H Brassica oleracea
BraA06t27571Z Brassica rapa
BraA09t37733Z Brassica rapa
BraA09t37734Z Brassica rapa
BraA09t38464Z Brassica rapa
C07p27620 Brassica napus
C07p27690 Brassica napus
C09p27070 Brassica napus
C09p36850 Brassica napus
CAN.G809.44 Capsicum annuum
CAN.G97.16 Capsicum annuum
CANSAT35G0308 Cannabis sativa
CARHR030480 Cardamine hirsuta
CARHR178180 Cardamine hirsuta
CARHR258260 Cardamine hirsuta
Carub.0001s2928 Capsella rubella
Carub.0008s0354 Capsella rubella
Ca_01981_v3 Cicer arietinum L.
Cc09_g04980 Coffea canephora
Cc09_g05010 Coffea canephora
CDE01G0767 Ceratophyllum demersum
Cfa001141 Carpinus fangiana
Cfa021674 Carpinus fangiana
Ciclev10016066m.g Citrus clementina
Ciclev10016075m.g Citrus clementina
CiPaw.10G105800 Carya illinoinensis
ClCG01G025830 Citrullus lanatus
Cpa.g.sc30.95 Carica papaya
Cre09.g389089 Chlamydomonas reinhardtii
CsaV3_6G053040 Cucumis sativus L.
CSS0007059 Camellia sinensis var. sinensis
CSS0016293 Camellia sinensis var. sinensis
DCAR_003753 Daucus carota
DCAR_004346 Daucus carota
DCAR_005093 Daucus carota
DCAR_014149 Daucus carota
Dinv26304 Davidia involucrata
Dinv26326 Davidia involucrata
Duzib187G1888 Durio zibethinus
ECA247G2038 Erigeron canadensis
ECA248G0390 Erigeron canadensis
EL10Ac7g17661 Beta vulgaris
EL10Ac7g17662 Beta vulgaris
Eucgr.E04318 Eucalyptus grandis
FAN11G0200 Fragaria x ananassa
FAN11G2415 Fragaria x ananassa
FAN15G2849 Fragaria x ananassa
FAN16G3712 Fragaria x ananassa
FAN20G2767 Fragaria x ananassa
FAN21G0114 Fragaria x ananassa
FAN21G3259 Fragaria x ananassa
FAN25G0248 Fragaria x ananassa
FAN25G0852 Fragaria x ananassa
FAN25G0950 Fragaria x ananassa
FvH4_2g11200 Fragaria vesca
FvH4_3g13080 Fragaria vesca
FvH4_3g13081 Fragaria vesca
Glyma.09G049900 Glycine max
Glyma.09G050100 Glycine max
Glyma.19G118300 Glycine max
Gohir.A05G011600 Gossypium hirsutum
Gohir.D05G012300 Gossypium hirsutum
Gohir.D05G012500 Gossypium hirsutum
Gorai.009G012600 Gossypium raimondii
Gorai.N022400 Gossypium raimondii
GSVIVG01012158001 Vitis vinifera
HanXRQChr01g0006281 Helianthus annuus
HanXRQChr02g0057671 Helianthus annuus
HanXRQChr05g0136291 Helianthus annuus
HanXRQChr07g0191351 Helianthus annuus
HanXRQChr08g0233221 Helianthus annuus
HanXRQChr10g0286421 Helianthus annuus
HanXRQChr10g0286441 Helianthus annuus
HanXRQChr10g0291791 Helianthus annuus
HanXRQChr15g0473141 Helianthus annuus
Haze_05250 Corylus avellana
Hma1.2p1_0185F.1_g081450 Hydrangea macrophylla
HPP92_016334 Vanilla planifolia
HPP92_016418 Vanilla planifolia
Hund12397 Selenicereus undatus
Lalb_Chr20g0114331 Lupinus albus
Lj1A1150T110 Lonicera japonica
Lj2A342T113 Lonicera japonica
Lj2C342T6 Lonicera japonica
Lj6g0002854 Lotus japonicus
Lj6g0023516 Lotus japonicus
Lsat_1_v5_gn_5_150720 Lactuca sativa
Lsat_1_v5_gn_9_33520 Lactuca sativa
Manes.03G071100 Manihot esculenta
Mapoly0004s0282 Marchantia polymorpha
MBI18_g01517_MAGBIO Magnolia biondii
MCO13G003 Micromonas commoda
MD10G1226500 Malus domestica
Medtr2g035460 Medicago truncatula
Medtr2g035470 Medicago truncatula
Medtr2g035480 Medicago truncatula
MELO3C007005.2 Cucumis melo
Migut.K00496 Erythranthe guttata
Migut.M02018 Erythranthe guttata
Migut.O00468 Erythranthe guttata
MSTRG.14821 Avicennia marina
Nitab4.5_0000844g0340 Nicotiana tabacum
Nitab4.5_0001499g0020 Nicotiana tabacum
Nitab4.5_0004630g0010 Nicotiana tabacum
Nitab4.5_0004630g0030 Nicotiana tabacum
Nitab4.5_0011308g0030 Nicotiana tabacum
Nn7g38363 Nelumbo nucifera
Oeu018411.1 Olea europaea
Oeu056065.1 Olea europaea
Os09g0560700 Oryza sativa ssp. japonica
Os09g0560800 Oryza sativa ssp. japonica
Peaxi162Scf00036g01013 Petunia axillaris
Peaxi162Scf00273g01119 Petunia axillaris
PGR042G1455 Punica granatum
PGR042G3123 Punica granatum
PGSC0003DMG400007330 Solanum tuberosum
PGSC0003DMG400015860 Solanum tuberosum
Phvul.009G243200 Phaseolus vulgaris
Phvul.009G243300 Phaseolus vulgaris
Potri.003G154900 Populus trichocarpa
Pp3c12_23100 Physcomitrium patens
Pp3c20_4970 Physcomitrium patens
PRCOL_00004579 Prasinoderma coloniale
Prupe.1G101100 Prunus persica
Psat1g150920 Pisum sativum
PSO675G6279 Papaver somniferum
PSO675G7745 Papaver somniferum
QL10p022110 Quercus lobata
RcHm_v2.0_Chr1g0318861 Rosa chinensis
RcHm_v2.0_Chr2g0118971 Rosa chinensis
RcHm_v2.0_Chr3g0492021 Rosa chinensis
RcHm_v2.0_Chr4g0396471 Rosa chinensis
RcHm_v2.0_Chr4g0419251 Rosa chinensis
RcHm_v2.0_Chr5g0008621 Rosa chinensis
RcHm_v2.0_Chr5g0021271 Rosa chinensis
RcHm_v2.0_Chr5g0021291 Rosa chinensis
RcHm_v2.0_Chr5g0021301 Rosa chinensis
RcHm_v2.0_Chr5g0021311 Rosa chinensis
RcHm_v2.0_Chr6g0272271 Rosa chinensis
Rhsim05G0003100 Rhododendron simsii
Rhsim07G0107500 Rhododendron simsii
Rhsim13G0134500 Rhododendron simsii
RhsimUnG0177400 Rhododendron simsii
Sabra03G0112100 Salix brachista
SalBow7G1084 Salvia bowleyana
SalBow8G1655 Salvia bowleyana
Sc17g0004290 Simmondsia chinensis
Sed0008992 Sechium edule
Sed0014929 Sechium edule
SGA_v2.0_scaffold171G38866 Striga asiatica
SGA_v2.0_scaffold341G49369 Striga asiatica
SMO143G0025 Selaginella moellendorffii
Solyc01g044370.3 Solanum lycopersicum
Solyc01g044375.1 Solanum lycopersicum
Solyc02g081880.3 Solanum lycopersicum
Sopen01g018350 Solanum pennellii
Sopen02g026500 Solanum pennellii
Sp2g09530 Schrenkiella parvula
Sp2g09560 Schrenkiella parvula
Sp6g07560 Schrenkiella parvula
TAR627G0606 Trochodendron aralioides
THA.LOC104798569 Tarenaya hassleriana
THA.LOC104811863 Tarenaya hassleriana
Thecc.09G141000 Theobroma cacao
Thhalv10000970m.g Eutrema salsugineum
Thhalv10001183m.g Eutrema salsugineum
Thhalv10011673m.g Eutrema salsugineum
TPR.G26578 Trifolium pratense
TPR.G29697 Trifolium pratense
TWI38G1552 Tripterygium wilfordii
unitig_748.g7553 Utricularia gibba
vmacro03561 Vaccinium macrocarpon
VMungo1309G0023 Vigna mungo
VMungo1309G1953 Vigna mungo
Zm00001eb104710 Zea mays
Zm00001eb104720 Zea mays
Zm00001eb104730 Zea mays

User provided reference genes

Program Settings