Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01690 Brassica napus
A04p14090 Brassica napus
A06p41570 Brassica napus
A07p20640 Brassica napus
A09p03220 Brassica napus
A10p25080 Brassica napus
Aa31LG2G5600 Aethionema arabicum
Aa31LG3G14540 Aethionema arabicum
Actinidia05882 Actinidia chinensis
Actinidia30614 Actinidia chinensis
Actinidia36220 Actinidia chinensis
Ah.03g148220 Amaranthus hybridus
AL5G16010 Arabidopsis lyrata
AL6G23740 Arabidopsis lyrata
AL7G48500 Arabidopsis lyrata
Aqoxy5G03249 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E5Z218 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XNCV96 Arachis hypogaea
AT3G26960 Arabidopsis thaliana
AT5G13140 Arabidopsis thaliana
AT5G41050 Arabidopsis thaliana
Atru.chr11.2383 Acer truncatum
Atru.chr6.2604 Acer truncatum
AUR62003412 Chenopodium quinoa
AUR62005672 Chenopodium quinoa
AUR62028883 Chenopodium quinoa
AUR62029430 Chenopodium quinoa
BcaB02g07915 Brassica carinata
BcaB04g19421 Brassica carinata
BcaB06g27587 Brassica carinata
BcaC04g19145 Brassica carinata
BcaC04g19146 Brassica carinata
BcaC04g19147 Brassica carinata
BcaC06g31029 Brassica carinata
BcaC06g33870 Brassica carinata
BcaC08g44504 Brassica carinata
BcaNung01173 Brassica carinata
BcaNung01860 Brassica carinata
BolC2t06535H Brassica oleracea
BolC4t26403H Brassica oleracea
BolC6t37149H Brassica oleracea
BolC7t44123H Brassica oleracea
BolC9t53263H Brassica oleracea
BolC9t59234H Brassica oleracea
BraA02t05148Z Brassica rapa
BraA04t17070Z Brassica rapa
BraA06t27082Z Brassica rapa
BraA07t29753Z Brassica rapa
BraA09t35960Z Brassica rapa
BraA10t44569Z Brassica rapa
C02p05900 Brassica napus
C04p48120 Brassica napus
C06p19560 Brassica napus
C07p36090 Brassica napus
C09p03420 Brassica napus
C09p63970 Brassica napus
CAN.G473.126 Capsicum annuum
CANSAT01G0148 Cannabis sativa
CANSAT64G0009 Cannabis sativa
CARHR148170 Cardamine hirsuta
CARHR200330 Cardamine hirsuta
CARHR213320 Cardamine hirsuta
Carub.0005s0517 Capsella rubella
Carub.0006s1131 Capsella rubella
Carub.0007s3444 Capsella rubella
Cc11_g17340 Coffea canephora
Cfa007202 Carpinus fangiana
Cfa009403 Carpinus fangiana
Ciclev10016966m.g Citrus clementina
Ciclev10032019m.g Citrus clementina
CiPaw.03G058700 Carya illinoinensis
CiPaw.05G105500 Carya illinoinensis
ClCG05G013790 Citrullus lanatus
ClCG06G001910 Citrullus lanatus
COL.COLO4_13299 Corchorus olitorius
COL.COLO4_13697 Corchorus olitorius
Cpa.g.sc19.168 Carica papaya
Cpa.g.sc70.117 Carica papaya
CsaV3_3G026830 Cucumis sativus L.
CsaV3_6G007960 Cucumis sativus L.
CSS0029953 Camellia sinensis var. sinensis
DCAR_000951 Daucus carota
DCAR_024647 Daucus carota
Dinv03746 Davidia involucrata
Dinv25641 Davidia involucrata
Duzib147G0512 Durio zibethinus
Duzib187G0713 Durio zibethinus
Duzib251G0616 Durio zibethinus
Duzib264G1204 Durio zibethinus
ECA232G4965 Erigeron canadensis
ECA234G0704 Erigeron canadensis
EL10Ac6g13556 Beta vulgaris
EL10Ac6g15447 Beta vulgaris
Eucgr.H03355 Eucalyptus grandis
Eucgr.H04602 Eucalyptus grandis
FAN02G3189 Fragaria x ananassa
FAN05G3864 Fragaria x ananassa
FAN05G5186 Fragaria x ananassa
FAN07G2884 Fragaria x ananassa
FAN09G0612 Fragaria x ananassa
FAN12G4071 Fragaria x ananassa
FAN14G4240 Fragaria x ananassa
FAN17G2382 Fragaria x ananassa
FvH4_4g23200 Fragaria vesca
FvH4_6g53930 Fragaria vesca
Glyma.08G360800 Glycine max
Glyma.16G053200 Glycine max
Glyma.18G300800 Glycine max
Glyma.19G096200 Glycine max
Gohir.A03G150400 Gossypium hirsutum
Gohir.A05G336300 Gossypium hirsutum
Gohir.A07G231800 Gossypium hirsutum
Gohir.D02G173200 Gossypium hirsutum
Gohir.D04G074800 Gossypium hirsutum
Gohir.D07G239000 Gossypium hirsutum
Gorai.001G275000 Gossypium raimondii
Gorai.005G194900 Gossypium raimondii
Gorai.012G084100 Gossypium raimondii
GSVIVG01033047001 Vitis vinifera
HanXRQChr09g0256481 Helianthus annuus
HanXRQChr12g0385701 Helianthus annuus
HanXRQChr15g0486761 Helianthus annuus
HanXRQChr17g0551651 Helianthus annuus
Haze_14905 Corylus avellana
Hma1.2p1_0525F.1_g172590 Hydrangea macrophylla
HPP92_001927 Vanilla planifolia
HPP92_024462 Vanilla planifolia
HPP92_028589 Vanilla planifolia
HPP92_028590 Vanilla planifolia
Hund12823 Selenicereus undatus
Hund25487 Selenicereus undatus
Lalb_Chr22g0360191 Lupinus albus
Lj1g0015821 Lotus japonicus
Lj6A832T39 Lonicera japonica
Lj7P612T71 Lonicera japonica
Lsat_1_v5_gn_0_3380 Lactuca sativa
Lsat_1_v5_gn_4_186081 Lactuca sativa
Lsat_1_v5_gn_4_2141 Lactuca sativa
Manes.04G087900 Manihot esculenta
Manes.11G083400 Manihot esculenta
Manes.12G007100 Manihot esculenta
Manes.13G007300 Manihot esculenta
MD13G1123800 Malus domestica
MD16G1124400 Malus domestica
MD17G1011000 Malus domestica
Medtr7g027020 Medicago truncatula
Medtr7g405770 Medicago truncatula
MELO3C014907.2 Cucumis melo
MELO3C022338.2 Cucumis melo
Migut.F00041 Erythranthe guttata
MSTRG.24107 Avicennia marina
Nitab4.5_0000519g0060 Nicotiana tabacum
Nitab4.5_0005858g0020 Nicotiana tabacum
Nn3g16368 Nelumbo nucifera
Nn4g22229 Nelumbo nucifera
Oeu035354.1 Olea europaea
Oeu048930.1 Olea europaea
Os09g0508200 Oryza sativa ssp. japonica
Os12g0472800 Oryza sativa ssp. japonica
Peaxi162Scf00128g00168 Petunia axillaris
Peaxi162Scf00420g00642 Petunia axillaris
PGR083G1640 Punica granatum
PGR119G1430 Punica granatum
PGSC0003DMG400020204 Solanum tuberosum
Phvul.001G089800 Phaseolus vulgaris
Phvul.008G001600 Phaseolus vulgaris
Potri.001G060500 Populus trichocarpa
Potri.001G326200 Populus trichocarpa
Potri.003G167100 Populus trichocarpa
Potri.017G068400 Populus trichocarpa
Prupe.1G221100 Prunus persica
Prupe.3G309900 Prunus persica
Psat0s1842g0120 Pisum sativum
Psat3g169000 Pisum sativum
PSO017G5017 Papaver somniferum
PSO478G1654 Papaver somniferum
QL02p070736 Quercus lobata
QL03p051089 Quercus lobata
RcHm_v2.0_Chr2g0176091 Rosa chinensis
RcHm_v2.0_Chr4g0429561 Rosa chinensis
Rhsim10G0004200 Rhododendron simsii
Rhsim12G0022800 Rhododendron simsii
Sabra01G0043400 Salix brachista
Sabra03G0122500 Salix brachista
Sabra16G0208700 Salix brachista
Sabra17G0059700 Salix brachista
SalBow4G2474 Salvia bowleyana
SalBow4G2791 Salvia bowleyana
SalBow8G1423 Salvia bowleyana
Sc03g0006240 Simmondsia chinensis
Sc11g0000300 Simmondsia chinensis
Sed0001071 Sechium edule
Sed0012834 Sechium edule
SEGI_36274 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16932 Striga asiatica
Solyc02g094330.3 Solanum lycopersicum
Sopen02g038980 Solanum pennellii
Sp2g16110 Schrenkiella parvula
Sp6g30840 Schrenkiella parvula
Sp7g00860 Schrenkiella parvula
TAR629G1599 Trochodendron aralioides
THA.LOC104807398 Tarenaya hassleriana
THA.LOC104825635 Tarenaya hassleriana
Thecc.02G199400 Theobroma cacao
Thecc.04G041300 Theobroma cacao
Thhalv10005021m.g Eutrema salsugineum
Thhalv10014366m.g Eutrema salsugineum
Thhalv10027964m.g Eutrema salsugineum
TPR.G15627 Trifolium pratense
TPR.G8570 Trifolium pratense
TWI18G0471 Tripterygium wilfordii
TWI34G0266 Tripterygium wilfordii
TWI34G0640 Tripterygium wilfordii
unitig_0.g1914 Utricularia gibba
unitig_748.g7082 Utricularia gibba
vmacro01039 Vaccinium macrocarpon
vmacro05978 Vaccinium macrocarpon
VMungo1383G2417 Vigna mungo
VMungo1383G2771 Vigna mungo
Zm00001eb317830 Zea mays
Zm00001eb408940 Zea mays

User provided reference genes

Program Settings